RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 C14orf166Q9Y224 244 aaKnown RBP4.59□□□□□ -1.67
VPS50-202ENST00000305866 DOCK11Q5JSL3 2073 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 VPS13CQ709C8 3753 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 TRAV24A0A0B4J272 114 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 H3BML4 177 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 TMPRSS2O15393 492 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 ZNF806P0C7X5 589 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 TNFRSF9Q07011 255 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 ANKRD39Q53RE8 183 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 SLC22A25Q6T423 547 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 TEX43Q6ZNM6 134 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 THNSL2Q86YJ6 484 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 LGI3Q8N145 548 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 HSD17B11Q8NBQ5 300 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 OR5A2Q8NGI9 324 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 OR5L1Q8NGL2 311 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 POM121L2Q96KW2 1035 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 PACRGQ96M98 296 aaPredicted RBP4.59□□□□□ -1.67
VPS50-202ENST00000305866 NCOR1P1Q9H4R4 102 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 ZNF665Q9H7R5 613 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 P4HTMQ9NXG6 502 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 WSB1Q9Y6I7 421 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 DMXL1Q9Y485 3027 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 C21orf140B9A014 251 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 TNFSF11O14788 317 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 NRASP01111 189 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 FOSL1P15407 271 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 TCN2P20062 427 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 CAMLGP49069 296 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 GAGE1Q13065 139 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 TAF9Q16594 264 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 CHRFAM7AQ494W8 412 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 SOHLH1Q5JUK2 328 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 PLA2G2CQ5R387 149 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 WDR86Q86TI4 376 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 MDS2Q8NDY4 140 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 OR1P1Q8NH06 330 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 FAM213BQ8TBF2 198 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 GATAD1Q8WUU5 269 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 RELTQ969Z4 430 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 RBMXL1Q96E39 390 aaKnown RBP4.59□□□□□ -1.68
VPS50-202ENST00000305866 PSMG3-AS1Q96PY0 264 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 GPR87Q9BY21 358 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 GPR173Q9NS66 373 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 DEPPQ9NTK1 212 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 GFOD1Q9NXC2 390 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 PITPNC1Q9UKF7 332 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 ATP23Q9Y6H3 246 aa4.59□□□□□ -1.68
VPS50-202ENST00000305866 A0A0G2JMM0 328 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 A0A1W2PPB8 328 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 A0A1W2PRS3 328 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 KIR3DP1A8MWS1 328 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 CYB5BO43169 146 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 ADAM20O43506 726 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 NEURL1O76050 574 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 CNOT4O95628 575 aaKnown RBP4.58□□□□□ -1.68
VPS50-202ENST00000305866 CER1O95813 267 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 TK1P04183 234 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 CELA2AP08217 269 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 PRSS12P56730 875 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 PHLDA2Q53GA4 152 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 ZNF766Q5HY98 468 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 DCAF10Q5QP82 559 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 IGF2-ASQ6U949 168 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 TGIF2LXQ8IUE1 241 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 FAM169BQ8N8A8 192 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 CCDC71LQ8N9Z2 235 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 ZNF114Q8NC26 417 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 HLA-CQ95604 372 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 LOXL4Q96JB6 756 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 FAM210BQ96KR6 192 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 NOL4LQ96MY1 436 aaPredicted RBP4.58□□□□□ -1.68
VPS50-202ENST00000305866 FOXB1Q99853 325 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 ULBP2Q9BZM5 246 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 VAX2Q9UIW0 290 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 PUS1Q9Y606 427 aaKnown RBP eCLIP4.58□□□□□ -1.68
VPS50-202ENST00000305866 RTTNQ86VV8 2226 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 A0A087X0M5 115 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 A0A1B0GUS0 222 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 A0A1B0GX30 115 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 NPIPA3F8WFD2 350 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 CHST1O43916 411 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 TAGLN2P37802 199 aaKnown RBP4.58□□□□□ -1.68
VPS50-202ENST00000305866 RBMXP38159 391 aaKnown RBP4.58□□□□□ -1.68
VPS50-202ENST00000305866 MDH2P40926 338 aaKnown RBP4.58□□□□□ -1.68
VPS50-202ENST00000305866 YPEL3P61236 119 aaPredicted RBP4.58□□□□□ -1.68
VPS50-202ENST00000305866 PNRC1Q12796 327 aaPredicted RBP4.58□□□□□ -1.68
VPS50-202ENST00000305866 PSG7Q13046 419 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 C3orf36Q3SXR2 165 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 C1orf194Q5T5A4 169 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 FBXW12Q6X9E4 464 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 GALNTL5Q7Z4T8 443 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 MRPL52Q86TS9 123 aaKnown RBP4.58□□□□□ -1.68
VPS50-202ENST00000305866 SUMF2Q8NBJ7 301 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 R3HDM4Q96D70 268 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 RSG1Q9BU20 258 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 WDR61Q9GZS3 305 aaKnown RBP4.58□□□□□ -1.68
VPS50-202ENST00000305866 EIF5A2Q9GZV4 153 aaKnown RBP4.58□□□□□ -1.68
VPS50-202ENST00000305866 KCNJ16Q9NPI9 418 aa4.58□□□□□ -1.68
VPS50-202ENST00000305866 PPP1R14DQ9NXH3 145 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms