RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 LRRC75BQ2VPJ9 315 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 DEFB133Q30KQ1 61 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 FAM69BQ5VUD6 431 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 CISD2Q8N5K1 135 aaKnown RBP9.29□□□□□ -0.92
ZNF558-201ENST00000301475 OR51H1Q8NH63 302 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 RLN3Q8WXF3 142 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 HS3ST6Q96QI5 342 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 UCN2Q96RP3 112 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 RAB40CQ96S21 281 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 TBX15Q96SF7 602 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 OPN3Q9H1Y3 402 aaPredicted RBP9.29□□□□□ -0.92
ZNF558-201ENST00000301475 LPAR2Q9HBW0 351 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 IGLV3-32A0A0A0MS00 114 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 CNOT4O95628 575 aaKnown RBP9.29□□□□□ -0.92
ZNF558-201ENST00000301475 LCATP04180 440 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 MSX1P28360 303 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 ARL4DP49703 201 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 RPL15P61313 204 aaKnown RBP9.29□□□□□ -0.92
ZNF558-201ENST00000301475 SERF2P84101 59 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 CFHR1Q03591 330 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 ARSJQ5FYB0 599 aaPredicted RBP9.29□□□□□ -0.92
ZNF558-201ENST00000301475 OR1K1Q8NGR3 316 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 IL22RA2Q969J5 263 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 MS4A10Q96PG2 267 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 WDR61Q9GZS3 305 aaKnown RBP9.29□□□□□ -0.92
ZNF558-201ENST00000301475 SLC25A22Q9H936 323 aa9.29□□□□□ -0.92
ZNF558-201ENST00000301475 A0A1W2PR80 420 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 ZNF705FA8MVS1 300 aaPredicted RBP9.28□□□□□ -0.92
ZNF558-201ENST00000301475 TMEM250H0YL14 139 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 HSPB6O14558 160 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 SYNGR3O43761 229 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 NAPSAO96009 420 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 GYPAP02724 150 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 PATE4P0C8F1 98 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 ZNF705DP0CH99 300 aaPredicted RBP9.28□□□□□ -0.92
ZNF558-201ENST00000301475 ZNF705BP0CI00 300 aaPredicted RBP9.28□□□□□ -0.92
ZNF558-201ENST00000301475 PSG2P11465 335 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 F2RP25116 425 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 GCH1P30793 250 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 OR10J1P30954 320 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 BRS3P32247 399 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 ANKRD37Q7Z713 158 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 DEFB119Q8N690 84 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 ZNF611Q8N823 705 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 OR4C12Q96R67 309 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 IL36RNQ9UBH0 155 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 CACNG5Q9UF02 275 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 CELSR3Q9NYQ7 3312 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 UBE2L5PA0A1B0GUS4 154 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 IGKV1-39P01597 117 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 IGKV1D-39P04432 117 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 LINC00614P0C842 121 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 CHRNA7P36544 502 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 ZNF468Q5VIY5 522 aaPredicted RBP9.28□□□□□ -0.92
ZNF558-201ENST00000301475 PLCXD3Q63HM9 321 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 ACSM6Q6P461 480 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 Q6ZS49 121 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.28□□□□□ -0.92
ZNF558-201ENST00000301475 MYPOPQ86VE0 399 aaPredicted RBP9.28□□□□□ -0.92
ZNF558-201ENST00000301475 OR5T1Q8NG75 326 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 OR4F5Q8NH21 305 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 OR4F4Q96R69 305 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 SLC39A9Q9NUM3 307 aa9.28□□□□□ -0.92
ZNF558-201ENST00000301475 M0QZK8 103 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 SYNGR2O43760 224 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 PIAS2O75928 621 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 DRD1P21728 446 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 OR1D5P58170 312 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 PRAMEF20Q5VT98 475 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 OR10V1Q8NGI7 309 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 ZCCHC14Q8WYQ9 949 aaKnown RBP9.27□□□□□ -0.93
ZNF558-201ENST00000301475 ULBP2Q9BZM5 246 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 UBE2ZQ9H832 354 aaPredicted RBP9.27□□□□□ -0.93
ZNF558-201ENST00000301475 PSENENQ9NZ42 101 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 hCG_38984A0A1B0GV85 526 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 YPEL1O60688 119 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 CRYABP02511 175 aaKnown RBP9.27□□□□□ -0.93
ZNF558-201ENST00000301475 SRP14P37108 136 aaKnown RBP9.27□□□□□ -0.93
ZNF558-201ENST00000301475 TNFSF10P50591 281 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 FUT6P51993 359 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 FAM78BQ5VT40 261 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 DMRTA1Q5VZB9 504 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 CST9LP1Q5W188 147 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 PIGCQ92535 297 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 TAF15Q92804 592 aaKnown RBP eCLIP9.27□□□□□ -0.93
ZNF558-201ENST00000301475 PINX1Q96BK5 328 aaKnown RBP9.27□□□□□ -0.93
ZNF558-201ENST00000301475 ANAPC16Q96DE5 110 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 YPEL2Q96QA6 119 aa9.27□□□□□ -0.93
ZNF558-201ENST00000301475 AURKAIP1Q9NWT8 199 aaPredicted RBP9.27□□□□□ -0.93
ZNF558-201ENST00000301475 TTC28Q96AY4 2481 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 C1QTNF9BB2RNN3 333 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 NPPCP23582 126 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 CCR5P51681 352 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 HNRNPKP61978 463 aaKnown RBP eCLIP9.26□□□□□ -0.93
ZNF558-201ENST00000301475 PRDX4Q13162 271 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 FAM27BQ5VT28 67 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 TOMM20LQ6UXN7 152 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 C17orf82Q86X59 251 aaPredicted RBP9.26□□□□□ -0.93
ZNF558-201ENST00000301475 GPR35Q9HC97 309 aa9.26□□□□□ -0.93
ZNF558-201ENST00000301475 KIAA1549Q9HCM3 1950 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms