RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CDK10Q15131 360 aa17.32■□□□□ 0.36
SMCO4-201ENST00000298966 KLF17Q5JT82 389 aaPredicted RBP17.32■□□□□ 0.36
SMCO4-201ENST00000298966 TRAT1Q6PIZ9 186 aa17.32■□□□□ 0.36
SMCO4-201ENST00000298966 BOLLQ8N9W6 283 aaKnown RBP17.32■□□□□ 0.36
SMCO4-201ENST00000298966 MRPL30Q8TCC3 161 aaKnown RBP17.32■□□□□ 0.36
SMCO4-201ENST00000298966 MED30Q96HR3 178 aa17.32■□□□□ 0.36
SMCO4-201ENST00000298966 HDHD3Q9BSH5 251 aaPredicted RBP17.32■□□□□ 0.36
SMCO4-201ENST00000298966 MMP26Q9NRE1 261 aa17.32■□□□□ 0.36
SMCO4-201ENST00000298966 NECAP2Q9NVZ3 263 aa17.32■□□□□ 0.36
SMCO4-201ENST00000298966 C7orf66A4D0T2 115 aa17.31■□□□□ 0.36
SMCO4-201ENST00000298966 ZNF737O75373 536 aa17.31■□□□□ 0.36
SMCO4-201ENST00000298966 CD80P33681 288 aa17.31■□□□□ 0.36
SMCO4-201ENST00000298966 SLC9A3R2Q15599 337 aa17.31■□□□□ 0.36
SMCO4-201ENST00000298966 BRICD5Q6PL45 260 aa17.31■□□□□ 0.36
SMCO4-201ENST00000298966 CD177Q8N6Q3 437 aa17.31■□□□□ 0.36
SMCO4-201ENST00000298966 TAF15Q92804 592 aaKnown RBP eCLIP17.31■□□□□ 0.36
SMCO4-201ENST00000298966 SCGB3A2Q96PL1 93 aa17.31■□□□□ 0.36
SMCO4-201ENST00000298966 PPA2Q9H2U2 334 aa17.31■□□□□ 0.36
SMCO4-201ENST00000298966 MMP24Q9Y5R2 645 aa17.31■□□□□ 0.36
SMCO4-201ENST00000298966 ALG5Q9Y673 324 aa17.31■□□□□ 0.36
SMCO4-201ENST00000298966 HSPB6O14558 160 aa17.3■□□□□ 0.36
SMCO4-201ENST00000298966 OR3A1P47881 315 aa17.3■□□□□ 0.36
SMCO4-201ENST00000298966 ZNF788Q6ZQV5 615 aa17.3■□□□□ 0.36
SMCO4-201ENST00000298966 IDO2Q6ZQW0 420 aa17.3■□□□□ 0.36
SMCO4-201ENST00000298966 OVCH2Q7RTZ1 564 aa17.3■□□□□ 0.36
SMCO4-201ENST00000298966 SLC36A1Q7Z2H8 476 aa17.3■□□□□ 0.36
SMCO4-201ENST00000298966 ASCC1Q8N9N2 400 aaKnown RBP17.3■□□□□ 0.36
SMCO4-201ENST00000298966 NEURL2Q9BR09 285 aa17.3■□□□□ 0.36
SMCO4-201ENST00000298966 GINS4Q9BRT9 223 aa17.3■□□□□ 0.36
SMCO4-201ENST00000298966 MBNL3Q9NUK0 354 aaKnown RBP17.3■□□□□ 0.36
SMCO4-201ENST00000298966 ZNF230Q9UIE0 474 aaPredicted RBP17.3■□□□□ 0.36
SMCO4-201ENST00000298966 A0A1B0GUS0 222 aa17.29■□□□□ 0.36
SMCO4-201ENST00000298966 TMEM82A0PJX8 343 aa17.29■□□□□ 0.36
SMCO4-201ENST00000298966 TRDCB7Z8K6 153 aa17.29■□□□□ 0.36
SMCO4-201ENST00000298966 C3orf80F5H4A9 247 aa17.29■□□□□ 0.36
SMCO4-201ENST00000298966 K7N7A8 449 aa17.29■□□□□ 0.36
SMCO4-201ENST00000298966 PSPNO60542 156 aa17.29■□□□□ 0.36
SMCO4-201ENST00000298966 PMP2P02689 132 aa17.29■□□□□ 0.36
SMCO4-201ENST00000298966 OMGP23515 440 aa17.29■□□□□ 0.36
SMCO4-201ENST00000298966 ERP29P30040 261 aaKnown RBP17.29■□□□□ 0.36
SMCO4-201ENST00000298966 GABRA2P47869 451 aa17.29■□□□□ 0.36
SMCO4-201ENST00000298966 TSPAN5P62079 268 aa17.29■□□□□ 0.36
SMCO4-201ENST00000298966 C6orf183Q5T699 404 aa17.29■□□□□ 0.36
SMCO4-201ENST00000298966 C17orf107Q6ZR85 190 aa17.29■□□□□ 0.36
SMCO4-201ENST00000298966 OR4A4PQ8NGN8 299 aa17.29■□□□□ 0.36
SMCO4-201ENST00000298966 RAB9BQ9NP90 201 aa17.29■□□□□ 0.36
SMCO4-201ENST00000298966 ARPC1BO15143 372 aaKnown RBP17.28■□□□□ 0.36
SMCO4-201ENST00000298966 SIGLEC5O15389 551 aa17.28■□□□□ 0.36
SMCO4-201ENST00000298966 IL5P05113 134 aa17.28■□□□□ 0.36
SMCO4-201ENST00000298966 GLP1RP43220 463 aa17.28■□□□□ 0.36
SMCO4-201ENST00000298966 SURF2Q15527 256 aaPredicted RBP17.28■□□□□ 0.36
SMCO4-201ENST00000298966 MUC20Q8N307 709 aaPredicted RBP17.28■□□□□ 0.36
SMCO4-201ENST00000298966 PLPPR1Q8TBJ4 325 aa17.28■□□□□ 0.36
SMCO4-201ENST00000298966 DYRK2Q92630 601 aa17.28■□□□□ 0.36
SMCO4-201ENST00000298966 GHITMQ9H3K2 345 aa17.28■□□□□ 0.36
SMCO4-201ENST00000298966 EHFQ9NZC4 300 aa17.28■□□□□ 0.36
SMCO4-201ENST00000298966 KCNIP1Q9NZI2 227 aa17.28■□□□□ 0.36
SMCO4-201ENST00000298966 KAAG1Q9UBP8 84 aa17.28■□□□□ 0.36
SMCO4-201ENST00000298966 TRAPPC2LQ9UL33 140 aa17.28■□□□□ 0.36
SMCO4-201ENST00000298966 POLR3KQ9Y2Y1 108 aaPredicted RBP17.28■□□□□ 0.36
SMCO4-201ENST00000298966 INSIG2Q9Y5U4 225 aa17.28■□□□□ 0.36
SMCO4-201ENST00000298966 IGHV3OR15-7A0A075B7D8 119 aa17.27■□□□□ 0.36
SMCO4-201ENST00000298966 HMX3A6NHT5 357 aa17.27■□□□□ 0.36
SMCO4-201ENST00000298966 CEACAM18A8MTB9 384 aa17.27■□□□□ 0.36
SMCO4-201ENST00000298966 FABP7O15540 132 aa17.27■□□□□ 0.36
SMCO4-201ENST00000298966 TK1P04183 234 aa17.27■□□□□ 0.36
SMCO4-201ENST00000298966 CEBPDP49716 269 aaPredicted RBP17.27■□□□□ 0.36
SMCO4-201ENST00000298966 RAB25P57735 213 aa17.27■□□□□ 0.36
SMCO4-201ENST00000298966 HLA-DRB3P79483 266 aa17.27■□□□□ 0.36
SMCO4-201ENST00000298966 ATXN7L3Q14CW9 347 aaPredicted RBP17.27■□□□□ 0.36
SMCO4-201ENST00000298966 KRBOX4Q5JUW0 171 aa17.27■□□□□ 0.36
SMCO4-201ENST00000298966 SPICQ8N5J4 248 aa17.27■□□□□ 0.36
SMCO4-201ENST00000298966 OR5T2Q8NGG2 359 aa17.27■□□□□ 0.36
SMCO4-201ENST00000298966 OR13C8Q8NGS7 320 aa17.27■□□□□ 0.36
SMCO4-201ENST00000298966 OR6F1Q8NGZ6 308 aa17.27■□□□□ 0.36
SMCO4-201ENST00000298966 TERB2Q8NHR7 220 aa17.27■□□□□ 0.36
SMCO4-201ENST00000298966 GIMAP1Q8WWP7 306 aa17.27■□□□□ 0.36
SMCO4-201ENST00000298966 WFDC12Q8WWY7 111 aa17.27■□□□□ 0.36
SMCO4-201ENST00000298966 ALX4Q9H161 411 aaPredicted RBP17.27■□□□□ 0.36
SMCO4-201ENST00000298966 FLVCR2Q9UPI3 526 aa17.27■□□□□ 0.36
SMCO4-201ENST00000298966 IGKV1D-8A0A087WSZ0 117 aa17.26■□□□□ 0.35
SMCO4-201ENST00000298966 M0QZ24 198 aa17.26■□□□□ 0.35
SMCO4-201ENST00000298966 OR5H8P0DN80 308 aa17.26■□□□□ 0.35
SMCO4-201ENST00000298966 SRSF4Q08170 494 aaKnown RBP17.26■□□□□ 0.35
SMCO4-201ENST00000298966 SCGB2B2Q4G0G5 96 aa17.26■□□□□ 0.35
SMCO4-201ENST00000298966 METTL11BQ5VVY1 283 aa17.26■□□□□ 0.35
SMCO4-201ENST00000298966 HIST2H2BDQ6DRA6 164 aa17.26■□□□□ 0.35
SMCO4-201ENST00000298966 DHRS11Q6UWP2 260 aa17.26■□□□□ 0.35
SMCO4-201ENST00000298966 LHFPL1Q86WI0 220 aa17.26■□□□□ 0.35
SMCO4-201ENST00000298966 MAFIPQ8WZ33 124 aa17.26■□□□□ 0.35
SMCO4-201ENST00000298966 GAFA1Q96PS6 74 aa17.26■□□□□ 0.35
SMCO4-201ENST00000298966 PATZ1Q9HBE1 687 aaKnown RBP17.26■□□□□ 0.35
SMCO4-201ENST00000298966 BEX1Q9HBH7 125 aa17.26■□□□□ 0.35
SMCO4-201ENST00000298966 OR6C3Q9NZP0 311 aa17.26■□□□□ 0.35
SMCO4-201ENST00000298966 MAB21L2Q9Y586 359 aa17.26■□□□□ 0.35
SMCO4-201ENST00000298966 NPIPB11E5RHQ5 1161 aa17.25■□□□□ 0.35
SMCO4-201ENST00000298966 IGHV2-70P01814 119 aa17.25■□□□□ 0.35
SMCO4-201ENST00000298966 SEC61A1P61619 476 aaKnown RBP17.25■□□□□ 0.35
SMCO4-201ENST00000298966 HMGN3Q15651 99 aa17.25■□□□□ 0.35
SMCO4-201ENST00000298966 Q6ZPA2 131 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms