RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 ZNF385CQ66K41 422 aaPredicted RBP4.89□□□□□ -1.63
CPSF2-201ENST00000298875 TEPPQ6URK8 271 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 NUBPLQ8TB37 319 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 ABHD1Q96SE0 405 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 IFITM10A6NMD0 228 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 HIST1H1EP10412 219 aaKnown RBP4.89□□□□□ -1.63
CPSF2-201ENST00000298875 LRRC75AQ8NAA5 344 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 HSPB7Q9UBY9 170 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 NDUFAF3Q9BU61 184 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 SEC11AP67812 179 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 PRICKLE4Q2TBC4 344 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 WDFY1Q8IWB7 410 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 SNRNP40Q96DI7 357 aaKnown RBP4.89□□□□□ -1.63
CPSF2-201ENST00000298875 ZNF764Q96H86 408 aaPredicted RBP4.89□□□□□ -1.63
CPSF2-201ENST00000298875 GNRHR2Q96P88 292 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 AURKAIP1Q9NWT8 199 aaPredicted RBP4.89□□□□□ -1.63
CPSF2-201ENST00000298875 IGHV3OR15-7A0A075B7D8 119 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 PAGE4O60829 102 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 FZD5Q13467 585 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 MRPL58Q14197 206 aaKnown RBP4.89□□□□□ -1.63
CPSF2-201ENST00000298875 SLC23A3Q6PIS1 610 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 ZNF793Q6ZN11 406 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 OR4X2Q8NGF9 303 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 SH3BGRL3Q9H299 93 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 OTOFQ9HC10 1997 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 CXorf1O96002 111 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 WNT5AP41221 380 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 RPS20P60866 119 aaKnown RBP4.89□□□□□ -1.63
CPSF2-201ENST00000298875 EWSR1Q01844 656 aaKnown RBP eCLIP4.89□□□□□ -1.63
CPSF2-201ENST00000298875 PIGYQ3MUY2 71 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 Q6ZNB5 142 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 ASCL5Q7RTU5 278 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 OR4X1Q8NH49 305 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 CARHSP1Q9Y2V2 147 aaKnown RBP4.89□□□□□ -1.63
CPSF2-201ENST00000298875 DICER1Q9UPY3 1922 aaKnown RBP4.89□□□□□ -1.63
CPSF2-201ENST00000298875 ZNF646O15015 1829 aaPredicted RBP4.89□□□□□ -1.63
CPSF2-201ENST00000298875 H3BQ15 152 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 FCARP24071 287 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 IGFBP6P24592 240 aaPredicted RBP4.89□□□□□ -1.63
CPSF2-201ENST00000298875 B4GALNT1Q00973 533 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 ZNF124Q15973 351 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 GUCD1Q96NT3 240 aa4.89□□□□□ -1.63
CPSF2-201ENST00000298875 ATAD5Q96QE3 1844 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 ARFGEF1Q9Y6D6 1849 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 A0A0B4J293 547 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 A0A1W2PPC4 97 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 SNURFLB1AK76 121 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 IGLV3-25P01717 112 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 FOXC1Q12948 553 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 TMEM240Q5SV17 173 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 SPINK14Q6IE38 97 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 TMEM108Q6UXF1 575 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 ZNF502Q8TBZ5 544 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 VENTXO95231 258 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 PSG2P11465 335 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 SRSF5Q13243 272 aaKnown RBP4.88□□□□□ -1.63
CPSF2-201ENST00000298875 C3AR1Q16581 482 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 HMGCLL1Q8TB92 370 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 CLN8Q9UBY8 286 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 VSIG4Q9Y279 399 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 OR51B2Q9Y5P1 312 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 SPTBN1Q01082 2364 aaKnown RBP4.88□□□□□ -1.63
CPSF2-201ENST00000298875 MYO7AQ13402 2215 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.88□□□□□ -1.63
CPSF2-201ENST00000298875 C2CD4DB7Z1M9 353 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 ZNF324O75467 553 aaPredicted RBP4.88□□□□□ -1.63
CPSF2-201ENST00000298875 FTH1P19P0C7X4 201 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 ID1P41134 155 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 IZUMO4Q1ZYL8 232 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 WFDC3Q8IUB2 231 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 OR11H7Q8NGC8 314 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 PTX4Q96A99 478 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 ANAPC13Q9BS18 74 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 TRIOBPQ9H2D6 2365 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 RPL34P49207 117 aaKnown RBP4.88□□□□□ -1.63
CPSF2-201ENST00000298875 OVOL2Q9BRP0 275 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 C19orf67A6NJJ6 358 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 KLK10O43240 276 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 CD74P04233 296 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 POU2AF1Q16633 256 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 MORN3Q6PF18 240 aaPredicted RBP4.88□□□□□ -1.63
CPSF2-201ENST00000298875 SLC25A42Q86VD7 318 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 NUP37Q8NFH4 326 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 NTMQ9P121 344 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 BRWD1Q9NSI6 2320 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 IGHV5-51A0A0C4DH38 117 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 LILRA5A6NI73 299 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 HINT1P49773 126 aaPredicted RBP4.88□□□□□ -1.63
CPSF2-201ENST00000298875 CLEC18BQ6UXF7 455 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 ZNF707Q96C28 371 aaPredicted RBP4.88□□□□□ -1.63
CPSF2-201ENST00000298875 MS4A3Q96HJ5 214 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 C19orf24Q9BVV8 132 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 KCNMB2Q9Y691 235 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 LOC107984156A0A0G2JMH3 177 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 C5orf67F2Z3F1 127 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 HLA-DRB1P01911 266 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 KIF26BQ2KJY2 2108 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 PRSS41Q7RTY9 318 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 ARL17AQ8IVW1 177 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 MRAP2Q96G30 205 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms