RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 BAGE3Q86Y29 109 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 BAGE2Q86Y30 109 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 BEND2Q8NDZ0 799 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 SIGLEC12Q96PQ1 595 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 P2RX4Q99571 388 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 FAM103A1Q9BTL3 118 aaKnown RBP9.78□□□□□ -0.84
TRUB1-201ENST00000298746 ZDHHC11Q9H8X9 412 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 RARRES3Q9UL19 164 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 C3orf80F5H4A9 247 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 KBTBD11O94819 623 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 RPLP1P05386 114 aaKnown RBP9.78□□□□□ -0.84
TRUB1-201ENST00000298746 OR3A1P47881 315 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 PPP1CBP62140 327 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 OR8B8Q15620 311 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 SPINK9Q5DT21 86 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 NMSQ5H8A3 153 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 DNLZQ5SXM8 178 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 CYP2G1PQ6ZSU1 146 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 SSX7Q7RTT5 188 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 OR51G1Q8NGK1 321 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 OR10G4Q8NGN3 311 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 OR10G9Q8NGN4 311 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 OR10G7Q8NGN6 311 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 ZNF488Q96MN9 340 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 TAAR3PQ9P1P4 343 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 CELA2AP08217 269 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 CTSSP25774 331 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 HIST1H3AP68431 136 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 FFAR4Q5NUL3 377 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 FAM27BQ5VT28 67 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 DBX2Q6ZNG2 339 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 CLDN23Q96B33 292 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 CFHR5Q9BXR6 569 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 CDH20Q9HBT6 801 aa9.78□□□□□ -0.84
TRUB1-201ENST00000298746 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 CTXN2P0C2S0 81 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 LMO1P25800 156 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 PAX9P55771 341 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 SERF2P84101 59 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 SHHQ15465 462 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 ZNF726P1Q15940 193 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 ZNF468Q5VIY5 522 aaPredicted RBP9.77□□□□□ -0.85
TRUB1-201ENST00000298746 ZDHHC23Q8IYP9 409 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 ZNF501Q96CX3 271 aaPredicted RBP9.77□□□□□ -0.85
TRUB1-201ENST00000298746 FOXB1Q99853 325 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 TRAPPC2LQ9UL33 140 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 PTRH2Q9Y3E5 179 aaKnown RBP9.77□□□□□ -0.85
TRUB1-201ENST00000298746 A0A1W2PPV4 95 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 CXCL13O43927 109 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 PFN1P07737 140 aaKnown RBP9.77□□□□□ -0.85
TRUB1-201ENST00000298746 OR10J1P30954 320 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 CARD18P57730 90 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 PSG4Q00888 419 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 ARL16Q0P5N6 197 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 TMEM256Q8N2U0 113 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 OR5D13Q8NGL4 314 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 VN1R17PQ8TDU5 208 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 TAF15Q92804 592 aaKnown RBP eCLIP9.77□□□□□ -0.85
TRUB1-201ENST00000298746 FREM1Q5H8C1 2179 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 DOCK10Q96BY6 2186 aa9.77□□□□□ -0.85
TRUB1-201ENST00000298746 MDFIC2A0A1B0GVS7 189 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 DUXBA0A1W2PPF3 345 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 H0Y980 276 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 CEACAM1P13688 526 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 CD27P26842 260 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 SRYQ05066 204 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 ZNF525Q8N782 197 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 CMTM2Q8TAZ6 248 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 TMEM170AQ8WVE7 144 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 HLA-CQ95604 372 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 NEIL1Q96FI4 390 aaPredicted RBP9.76□□□□□ -0.85
TRUB1-201ENST00000298746 ABHD14BQ96IU4 210 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 TMEM204Q9BSN7 226 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 R4GN57 208 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 PRUNE2Q8WUY3 3088 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 C11orf94C9JXX5 98 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 TIAF1O95411 115 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 HPRT1P00492 218 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 CFHR1Q03591 330 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 HYAL1Q12794 435 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 DMRTA1Q5VZB9 504 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 ZNF808Q8N4W9 903 aaPredicted RBP9.76□□□□□ -0.85
TRUB1-201ENST00000298746 NABP1Q96AH0 204 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 RP1L1Q8IWN7 2480 aaPredicted RBP9.76□□□□□ -0.85
TRUB1-201ENST00000298746 TRAV1-1A0A0B4J248 108 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 A0A0J9YW62 118 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 EDN3P14138 238 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 RAB4AP20338 218 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 HOXA6P31267 233 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 CLDN15P56746 228 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 KRTDAPP60985 99 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 PRDX4Q13162 271 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 Q6ZRM9 215 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 SGMS2Q8NHU3 365 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 RNASEH2CQ8TDP1 164 aaKnown RBP9.76□□□□□ -0.85
TRUB1-201ENST00000298746 VAMP8Q9BV40 100 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 FER1L5A0AVI2 2057 aa9.76□□□□□ -0.85
TRUB1-201ENST00000298746 C5orf49A4QMS7 147 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 OR6C6A6NF89 314 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 C1QTNF9BB2RNN3 333 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms