RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 CYB5BO43169 146 aa20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 EIF2S3P41091 472 aaKnown RBP20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 ALKBH6Q3KRA9 238 aa20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 H1FOOQ8IZA3 346 aaPredicted RBP20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 OR10V1Q8NGI7 309 aa20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 CDX2Q99626 313 aaPredicted RBP20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 DEFB127Q9H1M4 99 aa20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 DOCK11Q5JSL3 2073 aa20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 IFITM10A6NMD0 228 aa20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 B4E171 279 aa20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 PPIHO43447 177 aaKnown RBP20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 IFNA5P01569 189 aa20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 IGKV1-5P01602 117 aa20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 TSPAN7P41732 249 aa20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 S100A12P80511 92 aa20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 TLE4Q04727 773 aa20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 BAXQ07812 192 aa20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 GFI1BQ5VTD9 330 aa20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 MCEMP1Q8IX19 187 aa20.69■□□□□ 0.9
SPTSSA-201ENST00000298130 APLNRP35414 380 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 IL24Q13007 206 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 ZNF726P1Q15940 193 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 C4orf17Q53FE4 359 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 SPANXN5Q5MJ07 72 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 SPNS3Q6ZMD2 512 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 HAPLN4Q86UW8 402 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 SAXO1Q8IYX7 474 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 LINC00470Q9BZP3 86 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 TRAPPC2LQ9UL33 140 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 CTXN2P0C2S0 81 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 ZNF506Q5JVG8 444 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 BEND4Q6ZU67 534 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 WDR86Q86TI4 376 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 EDARADDQ8WWZ3 215 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 PSENENQ9NZ42 101 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 CFAP47Q6ZTR5 3102 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 GNG3P63215 75 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 TESK1Q15569 626 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 MDP1Q86V88 176 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 TVP23CQ96ET8 276 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 DOK5Q9P104 306 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 B4GALT7Q9UBV7 327 aa20.68■□□□□ 0.9
SPTSSA-201ENST00000298130 CXorf67Q86X51 503 aaPredicted RBP20.67■□□□□ 0.9
SPTSSA-201ENST00000298130 OR14J1Q9UGF5 321 aa20.67■□□□□ 0.9
SPTSSA-201ENST00000298130 TRGC2P03986 189 aa20.67■□□□□ 0.9
SPTSSA-201ENST00000298130 CLN3Q13286 438 aa20.67■□□□□ 0.9
SPTSSA-201ENST00000298130 SP5Q6BEB4 398 aaPredicted RBP20.67■□□□□ 0.9
SPTSSA-201ENST00000298130 OR8G2PQ6IF36 304 aa20.67■□□□□ 0.9
SPTSSA-201ENST00000298130 ZNF573Q86YE8 665 aa20.67■□□□□ 0.9
SPTSSA-201ENST00000298130 MALSU1Q96EH3 234 aa20.67■□□□□ 0.9
SPTSSA-201ENST00000298130 PLK3Q9H4B4 646 aa20.67■□□□□ 0.9
SPTSSA-201ENST00000298130 MRPS18CQ9Y3D5 142 aaKnown RBP20.67■□□□□ 0.9
SPTSSA-201ENST00000298130 CDIPTO14735 213 aa20.66■□□□□ 0.9
SPTSSA-201ENST00000298130 IL18BPO95998 194 aa20.66■□□□□ 0.9
SPTSSA-201ENST00000298130 NRN1LQ496H8 165 aa20.66■□□□□ 0.9
SPTSSA-201ENST00000298130 IL17BQ9UHF5 180 aa20.66■□□□□ 0.9
SPTSSA-201ENST00000298130 SYNGR2O43760 224 aa20.66■□□□□ 0.9
SPTSSA-201ENST00000298130 SS18L1O75177 396 aaPredicted RBP20.66■□□□□ 0.9
SPTSSA-201ENST00000298130 ATP1A1-AS1Q5TC04 95 aa20.66■□□□□ 0.9
SPTSSA-201ENST00000298130 ZNF787Q6DD87 383 aa20.66■□□□□ 0.9
SPTSSA-201ENST00000298130 SCGB1C1Q8TD33 95 aa20.66■□□□□ 0.9
SPTSSA-201ENST00000298130 SSX3Q99909 188 aa20.66■□□□□ 0.9
SPTSSA-201ENST00000298130 OR2H2O95918 312 aa20.65■□□□□ 0.9
SPTSSA-201ENST00000298130 HSPB1P04792 205 aaKnown RBP20.65■□□□□ 0.9
SPTSSA-201ENST00000298130 S100GP29377 79 aa20.65■□□□□ 0.9
SPTSSA-201ENST00000298130 ZNF585BQ52M93 769 aa20.65■□□□□ 0.9
SPTSSA-201ENST00000298130 USF3Q68DE3 2245 aa20.65■□□□□ 0.9
SPTSSA-201ENST00000298130 BTBD17A6NE02 478 aa20.65■□□□□ 0.9
SPTSSA-201ENST00000298130 CD200P41217 278 aa20.65■□□□□ 0.9
SPTSSA-201ENST00000298130 FAM209BQ5JX69 171 aa20.65■□□□□ 0.9
SPTSSA-201ENST00000298130 GGACTQ9BVM4 153 aa20.65■□□□□ 0.9
SPTSSA-201ENST00000298130 OR51I2Q9H344 312 aa20.65■□□□□ 0.9
SPTSSA-201ENST00000298130 UNKLQ9H9P5 680 aaKnown RBP20.65■□□□□ 0.9
SPTSSA-201ENST00000298130 LOC102723971A0A1B0GUV8 181 aa20.64■□□□□ 0.9
SPTSSA-201ENST00000298130 GRPP07492 148 aa20.64■□□□□ 0.9
SPTSSA-201ENST00000298130 ARR3P36575 388 aa20.64■□□□□ 0.9
SPTSSA-201ENST00000298130 CEACAM6P40199 344 aa20.64■□□□□ 0.9
SPTSSA-201ENST00000298130 Q6P435 159 aa20.64■□□□□ 0.9
SPTSSA-201ENST00000298130 LILRB2Q8N423 598 aa20.64■□□□□ 0.9
SPTSSA-201ENST00000298130 OR2J1Q9GZK6 312 aa20.64■□□□□ 0.9
SPTSSA-201ENST00000298130 A0A1B0GU03 582 aa20.64■□□□□ 0.89
SPTSSA-201ENST00000298130 DUXBA0A1W2PPF3 345 aa20.64■□□□□ 0.89
SPTSSA-201ENST00000298130 CD55P08174 381 aa20.64■□□□□ 0.89
SPTSSA-201ENST00000298130 LINC00205P59089 165 aa20.64■□□□□ 0.89
SPTSSA-201ENST00000298130 SRSF7Q16629 238 aaKnown RBP eCLIP20.64■□□□□ 0.89
SPTSSA-201ENST00000298130 TMPRSS5Q9H3S3 457 aa20.64■□□□□ 0.89
SPTSSA-201ENST00000298130 HOXA6P31267 233 aa20.63■□□□□ 0.89
SPTSSA-201ENST00000298130 DCAF10Q5QP82 559 aa20.63■□□□□ 0.89
SPTSSA-201ENST00000298130 ZNF808Q8N4W9 903 aaPredicted RBP20.63■□□□□ 0.89
SPTSSA-201ENST00000298130 ABHD14BQ96IU4 210 aa20.63■□□□□ 0.89
SPTSSA-201ENST00000298130 DFFBO76075 338 aa20.63■□□□□ 0.89
SPTSSA-201ENST00000298130 CEACAM1P13688 526 aa20.63■□□□□ 0.89
SPTSSA-201ENST00000298130 HOXB1P14653 301 aaPredicted RBP20.63■□□□□ 0.89
SPTSSA-201ENST00000298130 UBALD2Q8IYN6 164 aa20.63■□□□□ 0.89
SPTSSA-201ENST00000298130 TOLLIPQ9H0E2 274 aa20.63■□□□□ 0.89
SPTSSA-201ENST00000298130 UBE2L5PA0A1B0GUS4 154 aa20.63■□□□□ 0.89
SPTSSA-201ENST00000298130 RAMP3O60896 148 aa20.63■□□□□ 0.89
SPTSSA-201ENST00000298130 MEOX1P50221 254 aa20.63■□□□□ 0.89
SPTSSA-201ENST00000298130 SPINK9Q5DT21 86 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms