RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 NECAP2Q9NVZ3 263 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 LAMP3Q9UQV4 416 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 NKX2-6A6NCS4 301 aa13.34□□□□□ -0.27
UBAP1-201ENST00000297661 SSSCA1O60232 199 aa13.34□□□□□ -0.27
UBAP1-201ENST00000297661 NKX2-1P43699 371 aaPredicted RBP13.34□□□□□ -0.27
UBAP1-201ENST00000297661 Q0VFX4 171 aa13.34□□□□□ -0.27
UBAP1-201ENST00000297661 GGNQ86UU5 652 aa13.34□□□□□ -0.27
UBAP1-201ENST00000297661 CALHM1Q8IU99 346 aa13.34□□□□□ -0.27
UBAP1-201ENST00000297661 OR2Y1Q8NGV0 311 aa13.34□□□□□ -0.27
UBAP1-201ENST00000297661 MAGT1Q9H0U3 335 aa13.34□□□□□ -0.27
UBAP1-201ENST00000297661 ZNF407Q9C0G0 2248 aa13.34□□□□□ -0.27
UBAP1-201ENST00000297661 HSPB6O14558 160 aa13.34□□□□□ -0.27
UBAP1-201ENST00000297661 NPBWR2P48146 333 aa13.34□□□□□ -0.27
UBAP1-201ENST00000297661 PLCXD3Q63HM9 321 aa13.34□□□□□ -0.27
UBAP1-201ENST00000297661 PIP4P1Q86T03 277 aa13.34□□□□□ -0.27
UBAP1-201ENST00000297661 FAM185AQ8N0U4 392 aa13.34□□□□□ -0.27
UBAP1-201ENST00000297661 NECAP1Q8NC96 275 aa13.34□□□□□ -0.27
UBAP1-201ENST00000297661 OR10D3Q8NH80 312 aa13.34□□□□□ -0.27
UBAP1-201ENST00000297661 TMEM18Q96B42 140 aa13.34□□□□□ -0.27
UBAP1-201ENST00000297661 CTDSP1Q9GZU7 261 aa13.34□□□□□ -0.27
UBAP1-201ENST00000297661 LYRM2Q9NU23 88 aaPredicted RBP13.34□□□□□ -0.27
UBAP1-201ENST00000297661 PINLYPA6NC86 204 aa13.33□□□□□ -0.27
UBAP1-201ENST00000297661 FOLR3P41439 243 aa13.33□□□□□ -0.27
UBAP1-201ENST00000297661 RPL29P47914 159 aaKnown RBP13.33□□□□□ -0.27
UBAP1-201ENST00000297661 CLDN15P56746 228 aa13.33□□□□□ -0.27
UBAP1-201ENST00000297661 RAC3P60763 192 aa13.33□□□□□ -0.27
UBAP1-201ENST00000297661 SRYQ05066 204 aa13.33□□□□□ -0.27
UBAP1-201ENST00000297661 FOXB1Q99853 325 aa13.33□□□□□ -0.27
UBAP1-201ENST00000297661 WNT5BQ9H1J7 359 aa13.33□□□□□ -0.27
UBAP1-201ENST00000297661 DEPPQ9NTK1 212 aa13.33□□□□□ -0.27
UBAP1-201ENST00000297661 KIAA1549Q9HCM3 1950 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 TMEM210A6NLX4 147 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 TM4SF5O14894 197 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 OR7C1O76099 320 aaPredicted RBP13.33□□□□□ -0.28
UBAP1-201ENST00000297661 P04436 131 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 RPLP1P05386 114 aaKnown RBP13.33□□□□□ -0.28
UBAP1-201ENST00000297661 PLA2G5P39877 138 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 GAGE1Q13065 139 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 NCR3LG1Q68D85 454 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 BTNL3Q6UXE8 466 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 OSR2Q8N2R0 312 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 PRR18Q8N4B5 295 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 SPSB1Q96BD6 273 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 ZNF665Q9H7R5 613 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 CISD1Q9NZ45 108 aaKnown RBP13.33□□□□□ -0.28
UBAP1-201ENST00000297661 CHD8Q9HCK8 2581 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 A0A096LPE4 126 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 A0A1W2PPZ6 126 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 ZNF716A6NP11 495 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 SCGB1D1O95968 90 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 FTH1P19P0C7X4 201 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 BCL2P10415 239 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 OR3A1P47881 315 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 PDLIM4P50479 330 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 VAMP2P63027 116 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 C1orf194Q5T5A4 169 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 ACY3Q96HD9 319 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 TP53RKQ96S44 253 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 HIPK2Q9H2X6 1198 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 ZNF442Q9H7R0 627 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 CRIM1Q9NZV1 1036 aa13.33□□□□□ -0.28
UBAP1-201ENST00000297661 IFNL4K9M1U5 179 aa13.32□□□□□ -0.28
UBAP1-201ENST00000297661 CRYABP02511 175 aaKnown RBP13.32□□□□□ -0.28
UBAP1-201ENST00000297661 PFN1P07737 140 aaKnown RBP13.32□□□□□ -0.28
UBAP1-201ENST00000297661 CST2P09228 141 aa13.32□□□□□ -0.28
UBAP1-201ENST00000297661 ELLP55199 621 aaPredicted RBP13.32□□□□□ -0.28
UBAP1-201ENST00000297661 ERVS71-1P61550 626 aa13.32□□□□□ -0.28
UBAP1-201ENST00000297661 CNN3Q15417 329 aaKnown RBP13.32□□□□□ -0.28
UBAP1-201ENST00000297661 ODF3L1Q8IXM7 274 aa13.32□□□□□ -0.28
UBAP1-201ENST00000297661 TMEM37Q8WXS4 190 aa13.32□□□□□ -0.28
UBAP1-201ENST00000297661 HS3ST6Q96QI5 342 aa13.32□□□□□ -0.28
UBAP1-201ENST00000297661 OR2H1Q9GZK4 316 aa13.32□□□□□ -0.28
UBAP1-201ENST00000297661 PPP5D1E7EU14 171 aa13.32□□□□□ -0.28
UBAP1-201ENST00000297661 NXPH3O95157 252 aa13.32□□□□□ -0.28
UBAP1-201ENST00000297661 EDN3P14138 238 aa13.32□□□□□ -0.28
UBAP1-201ENST00000297661 GZMHP20718 246 aa13.32□□□□□ -0.28
UBAP1-201ENST00000297661 IDH3GP51553 393 aaPredicted RBP13.32□□□□□ -0.28
UBAP1-201ENST00000297661 PYGO2Q9BRQ0 406 aa13.32□□□□□ -0.28
UBAP1-201ENST00000297661 MRPS18CQ9Y3D5 142 aaKnown RBP13.32□□□□□ -0.28
UBAP1-201ENST00000297661 TRAV1-1A0A0B4J248 108 aa13.31□□□□□ -0.28
UBAP1-201ENST00000297661 OR6C6A6NF89 314 aa13.31□□□□□ -0.28
UBAP1-201ENST00000297661 CDS2O95674 445 aa13.31□□□□□ -0.28
UBAP1-201ENST00000297661 LINC00614P0C842 121 aa13.31□□□□□ -0.28
UBAP1-201ENST00000297661 CEACAM1P13688 526 aa13.31□□□□□ -0.28
UBAP1-201ENST00000297661 AADACP22760 399 aa13.31□□□□□ -0.28
UBAP1-201ENST00000297661 MRPS11P82912 194 aaKnown RBP13.31□□□□□ -0.28
UBAP1-201ENST00000297661 ADIRFQ15847 76 aa13.31□□□□□ -0.28
UBAP1-201ENST00000297661 CLEC12BQ2HXU8 276 aa13.31□□□□□ -0.28
UBAP1-201ENST00000297661 CXorf66Q5JRM2 361 aaPredicted RBP13.31□□□□□ -0.28
UBAP1-201ENST00000297661 DPPA3Q6W0C5 159 aa13.31□□□□□ -0.28
UBAP1-201ENST00000297661 Q6ZSR3 168 aa13.31□□□□□ -0.28
UBAP1-201ENST00000297661 C16orf82Q7Z2V1 217 aa13.31□□□□□ -0.28
UBAP1-201ENST00000297661 CPEB3Q8NE35 698 aaKnown RBP13.31□□□□□ -0.28
UBAP1-201ENST00000297661 DTD1Q8TEA8 209 aa13.31□□□□□ -0.28
UBAP1-201ENST00000297661 WFIKKN1Q96NZ8 548 aa13.31□□□□□ -0.28
UBAP1-201ENST00000297661 IL36RNQ9UBH0 155 aa13.31□□□□□ -0.28
UBAP1-201ENST00000297661 POLR3KQ9Y2Y1 108 aaPredicted RBP13.31□□□□□ -0.28
UBAP1-201ENST00000297661 DNAJC13O75165 2243 aa13.31□□□□□ -0.28
UBAP1-201ENST00000297661 KIR2DL5BA0A0G2JN68 375 aa13.31□□□□□ -0.28
UBAP1-201ENST00000297661 KIR2DL5BA0A0G2JPC4 375 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms