RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 BTF3L4Q96K17 158 aa16.33■□□□□ 0.2
TRA2A-201ENST00000297071 RSG1Q9BU20 258 aa16.33■□□□□ 0.2
TRA2A-201ENST00000297071 MAP1LC3BQ9GZQ8 125 aa16.33■□□□□ 0.2
TRA2A-201ENST00000297071 MTCH1Q9NZJ7 389 aa16.33■□□□□ 0.2
TRA2A-201ENST00000297071 PRSS50Q9UI38 385 aa16.33■□□□□ 0.2
TRA2A-201ENST00000297071 IGKV3D-15A0A087WSY6 115 aa16.32■□□□□ 0.2
TRA2A-201ENST00000297071 MBP02144 154 aa16.32■□□□□ 0.2
TRA2A-201ENST00000297071 FAM3BP58499 235 aaPredicted RBP16.32■□□□□ 0.2
TRA2A-201ENST00000297071 TMEM267Q0VDI3 215 aaPredicted RBP16.32■□□□□ 0.2
TRA2A-201ENST00000297071 LCN15Q6UWW0 184 aa16.32■□□□□ 0.2
TRA2A-201ENST00000297071 HAPLN4Q86UW8 402 aa16.32■□□□□ 0.2
TRA2A-201ENST00000297071 NAXEQ8NCW5 288 aa16.32■□□□□ 0.2
TRA2A-201ENST00000297071 TMEM170AQ8WVE7 144 aa16.32■□□□□ 0.2
TRA2A-201ENST00000297071 APOBEC3DQ96AK3 386 aaPredicted RBP16.32■□□□□ 0.2
TRA2A-201ENST00000297071 CEBPZOSA8MTT3 80 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 CXCL13O43927 109 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 ZNF737O75373 536 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 IGHEP01854 428 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 HLA-HP01893 362 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 AMBPP02760 352 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 PSG2P11465 335 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 PRSS12P56730 875 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 MEF2BQ02080 365 aaPredicted RBP16.31■□□□□ 0.2
TRA2A-201ENST00000297071 BSXQ3C1V8 233 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 CPEB3Q8NE35 698 aaKnown RBP16.31■□□□□ 0.2
TRA2A-201ENST00000297071 OR51G1Q8NGK1 321 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 TAF15Q92804 592 aaKnown RBP eCLIP16.31■□□□□ 0.2
TRA2A-201ENST00000297071 RHOVQ96L33 236 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 PKIBQ9C010 78 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 MANBALQ9NQG1 85 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 LIN7CQ9NUP9 197 aaKnown RBP16.31■□□□□ 0.2
TRA2A-201ENST00000297071 CHD3Q12873 2000 aaKnown RBP16.31■□□□□ 0.2
TRA2A-201ENST00000297071 A8MWP6 167 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 VENTXO95231 258 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 GZMBP10144 247 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 ARL16Q0P5N6 197 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 CLN3Q13286 438 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 NEK7Q8TDX7 302 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 SNX22Q96L94 193 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 SMIM7Q9BQ49 75 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 NDUFAF3Q9BU61 184 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 VSIRQ9H7M9 311 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 CACNG5Q9UF02 275 aa16.31■□□□□ 0.2
TRA2A-201ENST00000297071 OR5B21A6NL26 309 aa16.3■□□□□ 0.2
TRA2A-201ENST00000297071 IGKV1-39P01597 117 aa16.3■□□□□ 0.2
TRA2A-201ENST00000297071 IGKV1D-39P04432 117 aa16.3■□□□□ 0.2
TRA2A-201ENST00000297071 P04436 131 aa16.3■□□□□ 0.2
TRA2A-201ENST00000297071 METTL15P1P0C7V9 234 aa16.3■□□□□ 0.2
TRA2A-201ENST00000297071 SRP14P37108 136 aaKnown RBP16.3■□□□□ 0.2
TRA2A-201ENST00000297071 ACOT6Q3I5F7 207 aaPredicted RBP16.3■□□□□ 0.2
TRA2A-201ENST00000297071 PDZD11Q5EBL8 140 aa16.3■□□□□ 0.2
TRA2A-201ENST00000297071 TMEM14EPQ6UXP3 125 aa16.3■□□□□ 0.2
TRA2A-201ENST00000297071 Q6ZRM9 215 aa16.3■□□□□ 0.2
TRA2A-201ENST00000297071 SSX7Q7RTT5 188 aa16.3■□□□□ 0.2
TRA2A-201ENST00000297071 C16orf82Q7Z2V1 217 aa16.3■□□□□ 0.2
TRA2A-201ENST00000297071 MRPL21Q7Z2W9 205 aaKnown RBP16.3■□□□□ 0.2
TRA2A-201ENST00000297071 SPEM1Q8N4L4 309 aa16.3■□□□□ 0.2
TRA2A-201ENST00000297071 OR10D3Q8NH80 312 aa16.3■□□□□ 0.2
TRA2A-201ENST00000297071 PSMF1Q92530 271 aa16.3■□□□□ 0.2
TRA2A-201ENST00000297071 OR5B12Q96R08 314 aa16.3■□□□□ 0.2
TRA2A-201ENST00000297071 AKIRIN1Q9H9L7 192 aaPredicted RBP16.3■□□□□ 0.2
TRA2A-201ENST00000297071 MPC1Q9Y5U8 109 aa16.3■□□□□ 0.2
TRA2A-201ENST00000297071 PIEZO1Q92508 2521 aa16.3■□□□□ 0.2
TRA2A-201ENST00000297071 BRWD1Q9NSI6 2320 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 CABIN1Q9Y6J0 2220 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 CTXND1A0A1B0GTU2 59 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 A0A1B0GV90 55 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 GGCTO75223 188 aaKnown RBP16.29■□□□□ 0.2
TRA2A-201ENST00000297071 KLF7O75840 302 aaPredicted RBP16.29■□□□□ 0.2
TRA2A-201ENST00000297071 CCKARP32238 428 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 COL10A1Q03692 680 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 CDCP2Q5VXM1 449 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 LILRB2Q8N423 598 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 OR2Y1Q8NGV0 311 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 MEGF10Q96KG7 1140 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 SLC39A9Q9NUM3 307 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 OCIAD1Q9NX40 245 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 CDH23Q9H251 3354 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 RNF212BA8MTL3 300 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 HRASP01112 189 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 IGKV1-5P01602 117 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 PSMB3P49720 205 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 GPM6AP51674 278 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 RPL23P62829 140 aaKnown RBP16.29■□□□□ 0.2
TRA2A-201ENST00000297071 TCEAL6Q6IPX3 200 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 ZNF573Q86YE8 665 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 CISD2Q8N5K1 135 aaKnown RBP16.29■□□□□ 0.2
TRA2A-201ENST00000297071 LHX4Q969G2 390 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 HIST1H2AAQ96QV6 131 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 OR4C12Q96R67 309 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 SSX3Q99909 188 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 PHF7Q9BWX1 381 aaPredicted RBP16.29■□□□□ 0.2
TRA2A-201ENST00000297071 RBKSQ9H477 322 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 TMEM9BQ9NQ34 198 aa16.29■□□□□ 0.2
TRA2A-201ENST00000297071 ERRFI1Q9UJM3 462 aaPredicted RBP16.29■□□□□ 0.2
TRA2A-201ENST00000297071 PPP5D1E7EU14 171 aa16.28■□□□□ 0.2
TRA2A-201ENST00000297071 H3BP45 60 aa16.28■□□□□ 0.2
TRA2A-201ENST00000297071 H7BYZ3 331 aa16.28■□□□□ 0.2
TRA2A-201ENST00000297071 TRA2AQ13595 282 aaKnown RBP eCLIP16.28■□□□□ 0.22e-8■■■■■ 41.5
TRA2A-201ENST00000297071 ZNF468Q5VIY5 522 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms