RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 CLN3Q13286 438 aa8.68□□□□□ -1.02
CCDC36-201ENST00000296449 ZNF324BQ6AW86 544 aaPredicted RBP8.68□□□□□ -1.02
CCDC36-201ENST00000296449 ABLIM2Q6H8Q1 611 aa8.68□□□□□ -1.02
CCDC36-201ENST00000296449 PARD6GQ9BYG4 376 aaPredicted RBP8.68□□□□□ -1.02
CCDC36-201ENST00000296449 ACTR3CQ9C0K3 210 aaPredicted RBP8.68□□□□□ -1.02
CCDC36-201ENST00000296449 CACNG5Q9UF02 275 aa8.68□□□□□ -1.02
CCDC36-201ENST00000296449 ZNF407Q9C0G0 2248 aa8.68□□□□□ -1.02
CCDC36-201ENST00000296449 SYNGR2O43760 224 aa8.68□□□□□ -1.02
CCDC36-201ENST00000296449 IFNA1P01562 189 aa8.68□□□□□ -1.02
CCDC36-201ENST00000296449 IGKV1-39P01597 117 aa8.68□□□□□ -1.02
CCDC36-201ENST00000296449 IGKV1D-39P04432 117 aa8.68□□□□□ -1.02
CCDC36-201ENST00000296449 C21orf62-AS1Q17RA5 79 aa8.68□□□□□ -1.02
CCDC36-201ENST00000296449 SLC23A3Q6PIS1 610 aa8.68□□□□□ -1.02
CCDC36-201ENST00000296449 TGIF2LYQ8IUE0 185 aa8.68□□□□□ -1.02
CCDC36-201ENST00000296449 MRPL30Q8TCC3 161 aaKnown RBP8.68□□□□□ -1.02
CCDC36-201ENST00000296449 PINX1Q96BK5 328 aaKnown RBP8.68□□□□□ -1.02
CCDC36-201ENST00000296449 ZNF845Q96IR2 970 aaPredicted RBP8.68□□□□□ -1.02
CCDC36-201ENST00000296449 NOL4LQ96MY1 436 aaPredicted RBP8.68□□□□□ -1.02
CCDC36-201ENST00000296449 REPIN1Q9BWE0 567 aaKnown RBP8.68□□□□□ -1.02
CCDC36-201ENST00000296449 GPR87Q9BY21 358 aa8.68□□□□□ -1.02
CCDC36-201ENST00000296449 RIMS4Q9H426 269 aaPredicted RBP8.68□□□□□ -1.02
CCDC36-201ENST00000296449 RBKSQ9H477 322 aa8.68□□□□□ -1.02
CCDC36-201ENST00000296449 OR2W1Q9Y3N9 320 aa8.68□□□□□ -1.02
CCDC36-201ENST00000296449 TRBV6-6A0A0A6YYG2 114 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 MAP1LC3B2A6NCE7 125 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 AMBPP02760 352 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 PFN1P07737 140 aaKnown RBP8.67□□□□□ -1.02
CCDC36-201ENST00000296449 GZMBP10144 247 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 NDUFB7P17568 137 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 COL10A1Q03692 680 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 LRRC75BQ2VPJ9 315 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 CYP2G1PQ6ZSU1 146 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 CENPVQ7Z7K6 275 aaPredicted RBP8.67□□□□□ -1.02
CCDC36-201ENST00000296449 RPS19BP1Q86WX3 136 aaKnown RBP8.67□□□□□ -1.02
CCDC36-201ENST00000296449 LSM10Q969L4 123 aaKnown RBP8.67□□□□□ -1.02
CCDC36-201ENST00000296449 MAP1LC3BQ9GZQ8 125 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 PSENENQ9NZ42 101 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 NAT8Q9UHE5 227 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 TNRC6BQ9UPQ9 1833 aaKnown RBP8.67□□□□□ -1.02
CCDC36-201ENST00000296449 TRAPPC2LH3BP13 241 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 IGHV3-9P01782 118 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 SRD5A2P31213 254 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 ADIRFQ15847 76 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 TMEM41BQ5BJD5 291 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 BEND4Q6ZU67 534 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 C16orf82Q7Z2V1 217 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 OR1P1Q8NH06 330 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 OR10D3Q8NH80 312 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 KCNE4Q8WWG9 221 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 CLDN23Q96B33 292 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 ADGRG7Q96K78 797 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 SMIM7Q9BQ49 75 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 PLK3Q9H4B4 646 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 ERRFI1Q9UJM3 462 aaPredicted RBP8.67□□□□□ -1.02
CCDC36-201ENST00000296449 GAB2Q9UQC2 676 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 CHD3Q12873 2000 aaKnown RBP8.67□□□□□ -1.02
CCDC36-201ENST00000296449 LRP5LA4QPB2 252 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 SYNGR1O43759 233 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 KLF7O75840 302 aaPredicted RBP8.67□□□□□ -1.02
CCDC36-201ENST00000296449 IGKV1-5P01602 117 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 ELLP55199 621 aaPredicted RBP8.67□□□□□ -1.02
CCDC36-201ENST00000296449 MLF1P58340 268 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 CEACAM21Q3KPI0 293 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 NCR3LG1Q68D85 454 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 FAM180AQ6UWF9 173 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 ZDHHC23Q8IYP9 409 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 OR10J5Q8NHC4 309 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 ABHD3Q8WU67 409 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 RAB24Q969Q5 203 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 WDR61Q9GZS3 305 aaKnown RBP8.67□□□□□ -1.02
CCDC36-201ENST00000296449 TP53TG5Q9Y2B4 290 aa8.67□□□□□ -1.02
CCDC36-201ENST00000296449 CACNA1EQ15878 2313 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 A8MWP6 167 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 ZNF737O75373 536 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 RFPL3SP0C7P2 107 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 CCL2P13500 99 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 ZNF16P17020 682 aaPredicted RBP8.66□□□□□ -1.02
CCDC36-201ENST00000296449 CCNOP22674 350 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 NUBP1P53384 320 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 HBG1P69891 147 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 HBG2P69892 147 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 NRN1LQ496H8 165 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 LINC00596Q86U02 117 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 MKXQ8IYA7 352 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 BEND2Q8NDZ0 799 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 MISP3Q96FF7 219 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 OR4C12Q96R67 309 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 A6NJY4 79 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 CD300LBA8K4G0 201 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 HS3ST1O14792 307 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 GCGP01275 180 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 IGKV1D-33P01593 117 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 IGKV1-33P01594 117 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 IGLV2-14P01704 120 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 FGF5P12034 268 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 GZMHP20718 246 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 EPHA8P29322 1005 aaPredicted RBP8.66□□□□□ -1.02
CCDC36-201ENST00000296449 PLA2G5P39877 138 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 PDLIM4P50479 330 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 TMEM241Q24JQ0 296 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms