RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 MEGF6O75095 1541 aa10.25□□□□□ -0.77
SNIP1-201ENST00000296215 PIKFYVEQ9Y2I7 2098 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 K7N7A8 449 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 MRPL58Q14197 206 aaKnown RBP10.24□□□□□ -0.77
SNIP1-201ENST00000296215 POU2AF1Q16633 256 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 Q6ZVL8 140 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 ICAM5Q9UMF0 924 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 PIN1P1O15428 100 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 ID1P41134 155 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 EDDM3BP56851 147 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 GAB4Q2WGN9 574 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 TDRG1Q3Y452 100 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 LINC00346Q8IVM7 164 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 SCCPDHQ8NBX0 429 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 VOPP1Q96AW1 172 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 ABHD14AQ9BUJ0 271 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 RAB1BQ9H0U4 201 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 C5orf66Q9H5L9 145 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 C3orf85A0A1B0GTC6 90 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 KIR3DS1Q14943 382 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 OR5AN1Q8NGI8 311 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 CLEC3AO75596 197 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 AMY1AP04745 511 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 C9orf50Q5SZB4 431 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 C5orf24Q7Z6I8 188 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 SLC16A11Q8NCK7 471 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 APOBEC3DQ96AK3 386 aaPredicted RBP10.24□□□□□ -0.77
SNIP1-201ENST00000296215 HIST1H4GQ99525 98 aa10.24□□□□□ -0.77
SNIP1-201ENST00000296215 MCTS1Q9ULC4 181 aaKnown RBP10.24□□□□□ -0.77
SNIP1-201ENST00000296215 TEX48A0A1B0GUV7 120 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 LSRQ86X29 649 aaPredicted RBP10.23□□□□□ -0.77
SNIP1-201ENST00000296215 ZNF740Q8NDX6 193 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 RPRMQ9NS64 109 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 B4GALT6Q9UBX8 382 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 A0A1B0GUS0 222 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 IGLC7A0M8Q6 106 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 PSMB11A5LHX3 300 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 GPX1P07203 203 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 GPR6P46095 362 aaPredicted RBP10.23□□□□□ -0.77
SNIP1-201ENST00000296215 MEIG1Q5JSS6 88 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 BHLHA15Q7RTS1 189 aaPredicted RBP10.23□□□□□ -0.77
SNIP1-201ENST00000296215 FBXL14Q8N1E6 418 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 OR2M3Q8NG83 312 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 NHP2Q9NX24 153 aaKnown RBP10.23□□□□□ -0.77
SNIP1-201ENST00000296215 SH2D1BO14796 132 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 SYNGR1O43759 233 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 IL18BPO95998 194 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 TCTEX1D4Q5JR98 221 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 BHLHA9Q7RTU4 235 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 OR10AC1Q8NH08 325 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 PLD4Q96BZ4 506 aa10.23□□□□□ -0.77
SNIP1-201ENST00000296215 LINC01553A4QN01 128 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 C9orf118A6NHY6 69 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 ZNF716A6NP11 495 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 PLPP1O14494 284 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 CD1AP06126 327 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 ZNF735P0CB33 412 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 SCGB1D4Q6XE38 83 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 SYT8Q8NBV8 401 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 OR4X2Q8NGF9 303 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 FER1L6-AS2Q96M78 137 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 C20orf141Q9NUB4 165 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 ZNF391Q9UJN7 358 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 TNFSF11O14788 317 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 RNPS1Q15287 305 aaKnown RBP10.22□□□□□ -0.77
SNIP1-201ENST00000296215 OR1C1Q15619 314 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 SHISA6Q6ZSJ9 500 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 A4D1N5 150 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 IGLON5A6NGN9 336 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 GALR2O43603 387 aaPredicted RBP10.22□□□□□ -0.77
SNIP1-201ENST00000296215 RAC3P60763 192 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 ERVK-16P61578 105 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 TCEAL8Q8IYN2 117 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 OR51E1Q8TCB6 317 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 GPR146Q96CH1 333 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 MRIQ9BWK5 157 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 CXCL11O14625 94 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 SRSF10O75494 262 aaKnown RBP10.22□□□□□ -0.77
SNIP1-201ENST00000296215 BCL3P20749 454 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 APOBEC1P41238 236 aaKnown RBP10.22□□□□□ -0.77
SNIP1-201ENST00000296215 PDLIM4P50479 330 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 COA6Q5JTJ3 125 aaKnown RBP10.22□□□□□ -0.77
SNIP1-201ENST00000296215 HES3Q5TGS1 186 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 ABHD17CQ6PCB6 329 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 SAMD7Q7Z3H4 446 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 OR4A5Q8NH83 315 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 PLPPR1Q8TBJ4 325 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 DAZLQ92904 295 aaKnown RBP10.22□□□□□ -0.77
SNIP1-201ENST00000296215 FBXL7Q9UJT9 491 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 SCN4AP35499 1836 aa10.22□□□□□ -0.77
SNIP1-201ENST00000296215 MEF2CQ06413 473 aaPredicted RBP10.21□□□□□ -0.77
SNIP1-201ENST00000296215 DEFB134Q4QY38 66 aa10.21□□□□□ -0.77
SNIP1-201ENST00000296215 BAHD1Q8TBE0 780 aaPredicted RBP10.21□□□□□ -0.77
SNIP1-201ENST00000296215 CXCL16Q9H2A7 254 aa10.21□□□□□ -0.77
SNIP1-201ENST00000296215 C19orf25Q9UFG5 118 aaPredicted RBP10.21□□□□□ -0.77
SNIP1-201ENST00000296215 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.21□□□□□ -0.77
SNIP1-201ENST00000296215 HGFACQ04756 655 aa10.21□□□□□ -0.77
SNIP1-201ENST00000296215 PIGTQ969N2 578 aa10.21□□□□□ -0.77
SNIP1-201ENST00000296215 MRM2Q9UI43 246 aaKnown RBP10.21□□□□□ -0.77
SNIP1-201ENST00000296215 PXMP4Q9Y6I8 212 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms