RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 COMMD1Q8N668 190 aa15.3■□□□□ 0.04
CDC42EP3-201ENST00000295324 C1orf162Q8NEQ5 155 aaPredicted RBP15.3■□□□□ 0.04
CDC42EP3-201ENST00000295324 TMEM18Q96B42 140 aa15.3■□□□□ 0.04
CDC42EP3-201ENST00000295324 PAFAH1B2P68402 229 aa15.3■□□□□ 0.04
CDC42EP3-201ENST00000295324 GOLT1BQ9Y3E0 138 aa15.3■□□□□ 0.04
CDC42EP3-201ENST00000295324 HILPDAQ9Y5L2 63 aa15.3■□□□□ 0.04
CDC42EP3-201ENST00000295324 FAM27E3Q08E93 113 aa15.29■□□□□ 0.04
CDC42EP3-201ENST00000295324 RSRP1Q9BUV0 290 aa15.29■□□□□ 0.04
CDC42EP3-201ENST00000295324 POMT1Q9Y6A1 747 aa15.29■□□□□ 0.04
CDC42EP3-201ENST00000295324 A0A1W2PPE3 182 aa15.29■□□□□ 0.04
CDC42EP3-201ENST00000295324 SEZ6L2Q6UXD5 910 aa15.29■□□□□ 0.04
CDC42EP3-201ENST00000295324 SUCLG1P53597 346 aaKnown RBP15.29■□□□□ 0.04
CDC42EP3-201ENST00000295324 C12orf57Q99622 126 aa15.29■□□□□ 0.04
CDC42EP3-201ENST00000295324 CKAP5Q14008 2032 aa15.29■□□□□ 0.04
CDC42EP3-201ENST00000295324 SCN5AQ14524 2016 aa15.29■□□□□ 0.04
CDC42EP3-201ENST00000295324 FOXH1O75593 365 aa15.29■□□□□ 0.04
CDC42EP3-201ENST00000295324 INHBBP09529 407 aa15.29■□□□□ 0.04
CDC42EP3-201ENST00000295324 CDC34P49427 236 aaPredicted RBP15.29■□□□□ 0.04
CDC42EP3-201ENST00000295324 VWA1Q6PCB0 445 aa15.29■□□□□ 0.04
CDC42EP3-201ENST00000295324 DYRK2Q92630 601 aa15.29■□□□□ 0.04
CDC42EP3-201ENST00000295324 CABLES2Q9BTV7 478 aa15.29■□□□□ 0.04
CDC42EP3-201ENST00000295324 TGFBR3LH3BV60 316 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 HBZP02008 142 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 PAX5Q02548 391 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 RNF212Q495C1 297 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 CLEC9AQ6UXN8 241 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 MARVELD1Q9BSK0 173 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 ZNF318Q5VUA4 2279 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 ADAP1O75689 374 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 SPNP16150 400 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 OR1B1Q8NGR6 318 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 ZNHIT1O43257 154 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 ZIC3O60481 467 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 EGR4Q05215 589 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 BLNKQ8WV28 456 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 MRGPRFQ96AM1 343 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 YTHDF2Q9Y5A9 579 aaKnown RBP15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 CDS2O95674 445 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 FCGR3AP08637 254 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 CFHR1Q03591 330 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 NSUN5P2Q63ZY6 315 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 PPIAL4CA0A0B4J2A2 164 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 TRBV5-5A0A0J9YX44 114 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 SOX15O60248 233 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 PPIAL4GP0DN37 164 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 FABP9Q0Z7S8 132 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 RFLNBQ8N5W9 214 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 ZNF680Q8NEM1 530 aa15.28■□□□□ 0.04
CDC42EP3-201ENST00000295324 PIKFYVEQ9Y2I7 2098 aa15.27■□□□□ 0.04
CDC42EP3-201ENST00000295324 MAP1LC3B2A6NCE7 125 aa15.27■□□□□ 0.04
CDC42EP3-201ENST00000295324 NPIPB9F8W1W9 429 aa15.27■□□□□ 0.04
CDC42EP3-201ENST00000295324 SNAI3Q3KNW1 292 aa15.27■□□□□ 0.04
CDC42EP3-201ENST00000295324 MAP1LC3BQ9GZQ8 125 aa15.27■□□□□ 0.04
CDC42EP3-201ENST00000295324 ZNF552Q9H707 407 aaPredicted RBP15.27■□□□□ 0.04
CDC42EP3-201ENST00000295324 LCTP09848 1927 aa15.27■□□□□ 0.04
CDC42EP3-201ENST00000295324 SAXO1Q8IYX7 474 aa15.27■□□□□ 0.04
CDC42EP3-201ENST00000295324 SIRT4Q9Y6E7 314 aaPredicted RBP15.27■□□□□ 0.04
CDC42EP3-201ENST00000295324 LEUTXA8MZ59 168 aa15.27■□□□□ 0.03
CDC42EP3-201ENST00000295324 J3QR06 171 aa15.27■□□□□ 0.03
CDC42EP3-201ENST00000295324 HPRT1P00492 218 aa15.27■□□□□ 0.03
CDC42EP3-201ENST00000295324 ACSF3Q4G176 576 aaPredicted RBP15.27■□□□□ 0.03
CDC42EP3-201ENST00000295324 ODAMA1E959 279 aa15.27■□□□□ 0.03
CDC42EP3-201ENST00000295324 CYB5R3P00387 301 aaPredicted RBP15.27■□□□□ 0.03
CDC42EP3-201ENST00000295324 ZNF561Q8N587 486 aa15.27■□□□□ 0.03
CDC42EP3-201ENST00000295324 CLEC5AQ9NY25 188 aa15.27■□□□□ 0.03
CDC42EP3-201ENST00000295324 A0A1B0GU03 582 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 CHST1O43916 411 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 SLC6A1P30531 599 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 OR8I2Q8N0Y5 310 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 FADS6Q8N9I5 356 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 OR10G4Q8NGN3 311 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 OR10G9Q8NGN4 311 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 OR10G7Q8NGN6 311 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 C17orf51A8MQB3 221 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 EFNB2P52799 333 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 ERVFC1-1P60608 527 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 HDHD3Q9BSH5 251 aaPredicted RBP15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 PATJQ8NI35 1801 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 LOC105371242A0A075B767 164 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 G6PCP35575 357 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 P2RY1P47900 373 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 KLHDC1Q8N7A1 406 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 OR1L6Q8NGR2 347 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 FAM206AQ9NX38 181 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 RAB5AP20339 215 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 HTR1DP28221 377 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 ASCL3Q9NQ33 180 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 SLC2A8Q9NY64 477 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 NPY1RP25929 384 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 CD40P25942 277 aa15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 TECRQ9NZ01 308 aaKnown RBP15.26■□□□□ 0.03
CDC42EP3-201ENST00000295324 RTTNQ86VV8 2226 aa15.25■□□□□ 0.03
CDC42EP3-201ENST00000295324 DUXBA0A1W2PPF3 345 aa15.25■□□□□ 0.03
CDC42EP3-201ENST00000295324 RANP62826 216 aaKnown RBP15.25■□□□□ 0.03
CDC42EP3-201ENST00000295324 NHLRC2Q8NBF2 726 aa15.25■□□□□ 0.03
CDC42EP3-201ENST00000295324 RPL27AP46776 148 aaKnown RBP15.25■□□□□ 0.03
CDC42EP3-201ENST00000295324 UBE2L3P68036 154 aaKnown RBP15.25■□□□□ 0.03
CDC42EP3-201ENST00000295324 SBF1O95248 1867 aa15.25■□□□□ 0.03
CDC42EP3-201ENST00000295324 HNRNPA3P51991 378 aaKnown RBP15.25■□□□□ 0.03
CDC42EP3-201ENST00000295324 RHOFQ9HBH0 211 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms