RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 IL36GQ9NZH8 169 aa12.57□□□□□ -0.4
CCNF-201ENST00000293968 IGHV1-45A0A0A0MS14 117 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 ARGFXA6NJG6 315 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 P2RY6Q15077 328 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 SPINK9Q5DT21 86 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 C20orf204Q6ZNR8 217 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 LRP11Q86VZ4 500 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 CA5BP1Q8WTZ4 195 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 FUT9Q9Y231 359 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 OR2W1Q9Y3N9 320 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 ATP23Q9Y6H3 246 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 DOCK7Q96N67 2140 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 CLEC18AA5D8T8 446 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 NGFP01138 241 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 FGF12P61328 243 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 PMS2P11Q13670 270 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 BSXQ3C1V8 233 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 DMRTC2Q8IXT2 367 aaPredicted RBP12.56□□□□□ -0.4
CCNF-201ENST00000293968 CLEC18CQ8NCF0 446 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 ELOVL1Q9BW60 279 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 SF3B5Q9BWJ5 86 aaKnown RBP12.56□□□□□ -0.4
CCNF-201ENST00000293968 ZXDAP98168 799 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 ZNF726P1Q15940 193 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 THOC3Q96J01 351 aaKnown RBP12.56□□□□□ -0.4
CCNF-201ENST00000293968 ZNF552Q9H707 407 aaPredicted RBP12.56□□□□□ -0.4
CCNF-201ENST00000293968 ZNF391Q9UJN7 358 aa12.56□□□□□ -0.4
CCNF-201ENST00000293968 SCGB1D1O95968 90 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 CHRNA7P36544 502 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 PSMB3P49720 205 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 SLC38A11Q08AI6 406 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 PROK2Q9HC23 129 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 RNF115Q9Y4L5 304 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 DEGS1O15121 323 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 TOX3O15405 576 aaPredicted RBP12.55□□□□□ -0.4
CCNF-201ENST00000293968 KRASP01116 189 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 G0S2P27469 103 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 DPPA3Q6W0C5 159 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 MRGPRGQ86SM5 289 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 ZNF808Q8N4W9 903 aaPredicted RBP12.55□□□□□ -0.4
CCNF-201ENST00000293968 OR10V1Q8NGI7 309 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 NAT8Q9UHE5 227 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 LRRC3CA6NJW4 275 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 SLC31A2O15432 143 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 APLNRP35414 380 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 OR8G1Q15617 311 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 Q3ZCU0 254 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 MISP3Q96FF7 219 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 ANKRD30BLA7E2S9 258 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 COX6A1P12074 109 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 FOSL1P15407 271 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 FOLR3P41439 243 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 OR1P1Q8NH06 330 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 GATAD1Q8WUU5 269 aa12.55□□□□□ -0.4
CCNF-201ENST00000293968 GTF3AQ92664 365 aaKnown RBP12.55□□□□□ -0.4
CCNF-201ENST00000293968 DEFA4P12838 97 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 HLA-CQ95604 372 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 ABHD14BQ96IU4 210 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 ZNF576Q9H609 170 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 UMODP07911 640 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 ZNF816Q0VGE8 651 aaPredicted RBP12.54□□□□□ -0.4
CCNF-201ENST00000293968 TMEM41BQ5BJD5 291 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 MRPL14Q6P1L8 145 aaKnown RBP12.54□□□□□ -0.4
CCNF-201ENST00000293968 TGIF2LXQ8IUE1 241 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 ZNF525Q8N782 197 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 ZNF709Q8N972 641 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 OR51I2Q9H344 312 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 KIAA2026Q5HYC2 2103 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 CACNA1DQ01668 2161 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 ARHGAP21Q5T5U3 1957 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 DUXBA0A1W2PPF3 345 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 ZNF716A6NP11 495 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 DKK1O94907 266 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 NAPSAO96009 420 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 AMBPP02760 352 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 CEACAM1P13688 526 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 UBE2G2P60604 165 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 TMEM183AQ8IXX5 376 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 MRPL30Q8TCC3 161 aaKnown RBP12.54□□□□□ -0.4
CCNF-201ENST00000293968 SDSLQ96GA7 329 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 TECTBQ96PL2 329 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 ATG101Q9BSB4 218 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 DUSP23Q9BVJ7 150 aa12.54□□□□□ -0.4
CCNF-201ENST00000293968 TGOLN2O43493 480 aa12.53□□□□□ -0.4
CCNF-201ENST00000293968 CA6P23280 308 aa12.53□□□□□ -0.4
CCNF-201ENST00000293968 FOXG1P55316 489 aaPredicted RBP12.53□□□□□ -0.4
CCNF-201ENST00000293968 PLP2Q04941 152 aa12.53□□□□□ -0.4
CCNF-201ENST00000293968 CST9LP1Q5W188 147 aa12.53□□□□□ -0.4
CCNF-201ENST00000293968 ATG2AQ2TAZ0 1938 aa12.53□□□□□ -0.4
CCNF-201ENST00000293968 EGR1P18146 543 aa12.53□□□□□ -0.4
CCNF-201ENST00000293968 HNF1AP20823 631 aa12.53□□□□□ -0.4
CCNF-201ENST00000293968 Q6ZSR3 168 aa12.53□□□□□ -0.4
CCNF-201ENST00000293968 SRD5A2P31213 254 aa12.53□□□□□ -0.4
CCNF-201ENST00000293968 FAM3BP58499 235 aaPredicted RBP12.53□□□□□ -0.4
CCNF-201ENST00000293968 MEF2BQ02080 365 aaPredicted RBP12.53□□□□□ -0.4
CCNF-201ENST00000293968 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.53□□□□□ -0.4
CCNF-201ENST00000293968 FAM58AQ8N1B3 248 aa12.53□□□□□ -0.4
CCNF-201ENST00000293968 IFI44Q8TCB0 444 aa12.53□□□□□ -0.4
CCNF-201ENST00000293968 EPHA8P29322 1005 aaPredicted RBP12.52□□□□□ -0.4
CCNF-201ENST00000293968 COL19A1Q14993 1142 aa12.52□□□□□ -0.4
CCNF-201ENST00000293968 ZNF705FA8MVS1 300 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms