RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 PAGE4O60829 102 aa9.9□□□□□ -0.82
NPC1L1-201ENST00000289547 BCL2P10415 239 aa9.9□□□□□ -0.82
NPC1L1-201ENST00000289547 Q56UQ5 140 aa9.9□□□□□ -0.82
NPC1L1-201ENST00000289547 CDCP2Q5VXM1 449 aa9.9□□□□□ -0.82
NPC1L1-201ENST00000289547 SGMS2Q8NHU3 365 aa9.9□□□□□ -0.82
NPC1L1-201ENST00000289547 SPSB1Q96BD6 273 aa9.9□□□□□ -0.82
NPC1L1-201ENST00000289547 NKX2-6A6NCS4 301 aa9.9□□□□□ -0.82
NPC1L1-201ENST00000289547 LYZL6O75951 148 aa9.9□□□□□ -0.82
NPC1L1-201ENST00000289547 HOXA5P20719 270 aa9.9□□□□□ -0.82
NPC1L1-201ENST00000289547 CTSSP25774 331 aa9.9□□□□□ -0.82
NPC1L1-201ENST00000289547 PAFAH1B2P68402 229 aa9.9□□□□□ -0.82
NPC1L1-201ENST00000289547 C2orf68Q2NKX9 166 aa9.9□□□□□ -0.82
NPC1L1-201ENST00000289547 OR1L6Q8NGR2 347 aa9.9□□□□□ -0.82
NPC1L1-201ENST00000289547 AQP10Q96PS8 301 aa9.9□□□□□ -0.82
NPC1L1-201ENST00000289547 RARRES2Q99969 163 aa9.9□□□□□ -0.82
NPC1L1-201ENST00000289547 SRD5A3Q9H8P0 318 aa9.9□□□□□ -0.82
NPC1L1-201ENST00000289547 TDRD6O60522 2096 aaKnown RBP9.9□□□□□ -0.83
NPC1L1-201ENST00000289547 TMEM11P17152 192 aa9.9□□□□□ -0.83
NPC1L1-201ENST00000289547 VDAC1P21796 283 aa9.9□□□□□ -0.83
NPC1L1-201ENST00000289547 CD226Q15762 336 aa9.9□□□□□ -0.83
NPC1L1-201ENST00000289547 H1FXQ92522 213 aaKnown RBP9.9□□□□□ -0.83
NPC1L1-201ENST00000289547 MANBALQ9NQG1 85 aa9.9□□□□□ -0.83
NPC1L1-201ENST00000289547 TSC2P49815 1807 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 IGLV3-12A0A075B6K2 115 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 TSPAN2O60636 221 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 CD74P04233 296 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 IL3RAP26951 378 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 TUSC5Q8IXB3 177 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 OR2D3Q8NGH3 330 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 CACFD1Q9UGQ2 172 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 PIN1P1O15428 100 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 SYNGR2O43760 224 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 HSPB1P04792 205 aaKnown RBP9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 FHITP49789 147 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 ARL16Q0P5N6 197 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 MRPL54Q6P161 138 aaKnown RBP9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 S100A7AQ86SG5 101 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 APCDD1LQ8NCL9 501 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 TMEM171Q8WVE6 324 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 ACY3Q96HD9 319 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 OR6C3Q9NZP0 311 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 LIPT2A6NK58 231 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 PPOXP50336 477 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 RAB7AP51149 207 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 FUT6P51993 359 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 TBR1Q16650 682 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 MESTQ5EB52 335 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 CACNA1IQ9P0X4 2223 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 GPR12P47775 334 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 RND3P61587 244 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 SPATA45Q537H7 98 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 ARL6IP6Q8N6S5 226 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 OR4B1Q8NGF8 309 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 OR6X1Q8NH79 312 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 HEXA-AS1Q9H8Q6 139 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 UQCR10Q9UDW1 63 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 ZNF835Q9Y2P0 537 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 GREB1Q4ZG55 1949 aa9.89□□□□□ -0.83
NPC1L1-201ENST00000289547 CDS2O95674 445 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 HKR1P10072 659 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 HERPUD1Q15011 391 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 TBC1D26Q86UD7 250 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 ZNF573Q86YE8 665 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 UBTD1Q9HAC8 227 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 PDCD6O75340 191 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 CTSBP07858 339 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 HIST1H1BP16401 226 aaKnown RBP9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 MDH2P40926 338 aaKnown RBP9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 P2RY6Q15077 328 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 H1FOOQ8IZA3 346 aaPredicted RBP9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 OR1F12Q8NHA8 337 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 SFXN3Q9BWM7 321 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 ZNF665Q9H7R5 613 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 NPTNQ9Y639 398 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 ENSAO43768 121 aaKnown RBP9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 CD8AP01732 235 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 CTAG1AP78358 180 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 WDR61Q9GZS3 305 aaKnown RBP9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 DNAJC4Q9NNZ3 241 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 PLPP3O14495 311 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 S100A7P31151 101 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 BRS3P32247 399 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 EFNB1P98172 346 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 MGAT2Q10469 447 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 FAM214BQ7L5A3 538 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 ZPLD1Q8TCW7 415 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 TMEM147Q9BVK8 224 aa9.88□□□□□ -0.83
NPC1L1-201ENST00000289547 DHRS3O75911 302 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 PLA2G5P39877 138 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 PLPPR5Q32ZL2 321 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 HOGA1Q86XE5 327 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 PRSS3P2Q8NHM4 247 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 DPF1Q92782 380 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 GPR132Q9UNW8 380 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 DTX4Q9Y2E6 619 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 KLHDC2Q9Y2U9 406 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 GAGE10A6NGK3 116 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 DHRS7CA6NNS2 312 aa9.87□□□□□ -0.83
NPC1L1-201ENST00000289547 SH2D1BO14796 132 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms