RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 METTL11BQ5VVY1 283 aa7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 CCBE1Q6UXH8 406 aaPredicted RBP7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 Q6ZRG5 221 aa7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 HSD17B10Q99714 261 aaKnown RBP7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 TM2D1Q9BX74 207 aa7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 MLXQ9UH92 298 aa7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 RAB22AQ9UL26 194 aa7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 PAX1P15863 534 aa7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 REG1BP48304 166 aa7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 SUB1P53999 127 aaKnown RBP eCLIP7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 ELLP55199 621 aaPredicted RBP7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 TAS2R30P59541 319 aa7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 ECSCRQ19T08 205 aa7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 LRP11Q86VZ4 500 aa7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 OR8B3Q8NGG8 313 aa7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 OR2T6Q8NHC8 308 aa7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 MRGPRDQ8TDS7 321 aa7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 C1orf147Q96MC9 270 aaPredicted RBP7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 OR8B2Q96RD0 313 aa7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 RABAC1Q9UI14 185 aa7.13□□□□□ -1.27
PTPDC1-201ENST00000288976 IGHV1-46P01743 117 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 APOC3P02656 99 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 NFYAP23511 347 aaPredicted RBP7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 S100PP25815 95 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 MUC15Q8N387 334 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 POC1AQ8NBT0 407 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 DYNLRB2Q8TF09 96 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 AQP3Q92482 292 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 DPH3Q96FX2 82 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 MEGF10Q96KG7 1140 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 DPCDQ9BVM2 203 aaPredicted RBP7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 PARP12Q9H0J9 701 aaKnown RBP7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 ARV1Q9H2C2 271 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 PSG11Q9UQ72 335 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 TMEM272A0A1B0GTI8 110 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 DANCRP0C864 163 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 TAS2R46P59540 309 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 ERHP84090 104 aaKnown RBP7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 BAMBIQ13145 260 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 IAH1Q2TAA2 248 aaPredicted RBP7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 WDR86Q86TI4 376 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 IGFBPL1Q8WX77 278 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 IGHV3OR16-12A0A075B7B8 117 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 IGHV3-72A0A0B4J1Y9 119 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 OR7C2O60412 319 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 RP2O75695 350 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 S100A7P31151 101 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 PMELP40967 661 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 OR2F1Q13607 317 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 TATDN3Q17R31 274 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 TPRX1Q8N7U7 411 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 SULT4A1Q9BR01 284 aa7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 THAP7Q9BT49 309 aaPredicted RBP7.12□□□□□ -1.27
PTPDC1-201ENST00000288976 IGHV3OR15-7A0A075B7D8 119 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 CTAG2O75638 210 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 PLAUP00749 431 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 PGA5P0DJD9 388 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 ERVK11-1P61568 191 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 IL13RA2Q14627 380 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 CCDC190Q86UF4 302 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 NEU4Q8WWR8 484 aaPredicted RBP7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 SEH1LQ96EE3 360 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 SLC25A22Q9H936 323 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 SIRT7Q9NRC8 400 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 PUS1Q9Y606 427 aaKnown RBP eCLIP7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 POM121CA8CG34 1229 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 H0Y8G0 127 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 H0YL77 283 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 PF4V1P10720 104 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 TBPP20226 339 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 ARF6P62330 175 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 ZNF45Q02386 682 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 C2orf76Q3KRA6 126 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 MINDY2Q8NBR6 621 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 EDARADDQ8WWZ3 215 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 GALMQ96C23 342 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 MAGT1Q9H0U3 335 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 TRAV38-1A0A0B4J264 116 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 TAS2R19P59542 299 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 RPS27AP62979 156 aaKnown RBP7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 SP5Q6BEB4 398 aaPredicted RBP7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 FAM89BQ8N5H3 189 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 MISP3Q96FF7 219 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 MMP28Q9H239 520 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 MIXL1Q9H2W2 232 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 AKIP1Q9NQ31 210 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 CTDSPLO15194 276 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 LYRM1O43325 122 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 PF4P02776 101 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 OR8U8P0C7N1 319 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 VSIG8P0DPA2 414 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 IAPPP10997 89 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 RAB4AP20338 218 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 FGF12P61328 243 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 HTD2P86397 168 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 CYCSP99999 105 aaKnown RBP7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 OPCMLQ14982 345 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 C11orf53Q8IXP5 236 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 DUX5Q96PT3 197 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 SOSTQ9BQB4 213 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms