RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 OR4F4Q96R69 305 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 SMIM7Q9BQ49 75 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 DLL3Q9NYJ7 618 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 POLDIP2Q9Y2S7 368 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 GTF3C1Q12789 2109 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 A0A1W2PPV4 95 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 MSMO1Q15800 293 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 BTNL8Q6UX41 500 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 RAB39BQ96DA2 213 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 TMEM131Q92545 1883 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 LNP1A1A4G5 178 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 WNT9BO14905 357 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 RIPPLY2Q5TAB7 128 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 TMEM178AQ8NBL3 297 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 OR5A2Q8NGI9 324 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 CLN8Q9UBY8 286 aa13.6□□□□□ -0.23
SMAD6-201ENST00000288840 CARHSP1Q9Y2V2 147 aaKnown RBP13.6□□□□□ -0.23
SMAD6-201ENST00000288840 Q3ZCU0 254 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 GALMQ96C23 342 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 CABLES2Q9BTV7 478 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 TAAR3PQ9P1P4 343 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 WNK2Q9Y3S1 2297 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 DNPH1O43598 174 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 OPN1MWP04001 364 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 OPN1MW2P0DN77 364 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 OPN1MW3P0DN78 364 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 CATR1Q13166 79 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 ZNF880Q6PDB4 577 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 C15orf54Q8N8G6 183 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 ATP23Q9Y6H3 246 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 OR5H1A6NKK0 313 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 OTX1P32242 354 aaPredicted RBP13.59□□□□□ -0.23
SMAD6-201ENST00000288840 ZFP36L1Q07352 338 aaKnown RBP13.59□□□□□ -0.23
SMAD6-201ENST00000288840 HPSE2Q8WWQ2 592 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 TVP23CQ96ET8 276 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 ABHD14BQ96IU4 210 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 TECTBQ96PL2 329 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 DCAF16Q9NXF7 216 aa13.59□□□□□ -0.23
SMAD6-201ENST00000288840 LRP5LA4QPB2 252 aa13.58□□□□□ -0.23
SMAD6-201ENST00000288840 PPP1R2P9O14990 202 aa13.58□□□□□ -0.23
SMAD6-201ENST00000288840 CD200P41217 278 aa13.58□□□□□ -0.23
SMAD6-201ENST00000288840 SRSF4Q08170 494 aaKnown RBP13.58□□□□□ -0.23
SMAD6-201ENST00000288840 MAJINQ3KP22 176 aa13.58□□□□□ -0.23
SMAD6-201ENST00000288840 OR2Z1Q8NG97 314 aa13.58□□□□□ -0.23
SMAD6-201ENST00000288840 OR52L2PQ8NGH6 319 aa13.58□□□□□ -0.23
SMAD6-201ENST00000288840 OR10D4PQ8NGN7 298 aa13.58□□□□□ -0.23
SMAD6-201ENST00000288840 GALNT14Q96FL9 552 aa13.58□□□□□ -0.23
SMAD6-201ENST00000288840 A0A1W2PPQ1 181 aa13.58□□□□□ -0.24
SMAD6-201ENST00000288840 RRP8O43159 456 aaKnown RBP13.58□□□□□ -0.24
SMAD6-201ENST00000288840 SP1P08047 785 aa13.58□□□□□ -0.24
SMAD6-201ENST00000288840 TMPRSS5Q9H3S3 457 aa13.58□□□□□ -0.24
SMAD6-201ENST00000288840 CACNA1BQ00975 2339 aa13.58□□□□□ -0.24
SMAD6-201ENST00000288840 OR2H2O95918 312 aa13.58□□□□□ -0.24
SMAD6-201ENST00000288840 PDLIM3Q53GG5 364 aaPredicted RBP13.58□□□□□ -0.24
SMAD6-201ENST00000288840 LIN7CQ9NUP9 197 aaKnown RBP13.58□□□□□ -0.24
SMAD6-201ENST00000288840 TMEM100Q9NV29 134 aa13.58□□□□□ -0.24
SMAD6-201ENST00000288840 GFOD1Q9NXC2 390 aa13.58□□□□□ -0.24
SMAD6-201ENST00000288840 TUBD1Q9UJT1 453 aa13.58□□□□□ -0.24
SMAD6-201ENST00000288840 TRBV23-1A0A0A0MS06 115 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 C9orf172C9J069 976 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 HOXA1P49639 335 aaPredicted RBP13.57□□□□□ -0.24
SMAD6-201ENST00000288840 B3GALT5-AS1P59052 145 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 HLA-DRB3P79483 266 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 SLC38A11Q08AI6 406 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 DEFB109BQ30KR1 87 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 PRAMEF5Q5TYX0 476 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 OR1L1Q8NH94 360 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 ZNF703Q9H7S9 590 aaPredicted RBP13.57□□□□□ -0.24
SMAD6-201ENST00000288840 GCM1Q9NP62 436 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 ENY2Q9NPA8 101 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 A0A1W2PPE3 182 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 MAP1LC3B2A6NCE7 125 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 NKX2-8O15522 239 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 ATP5SQ99766 215 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 REPIN1Q9BWE0 567 aaKnown RBP13.57□□□□□ -0.24
SMAD6-201ENST00000288840 MAP1LC3BQ9GZQ8 125 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 RIMS4Q9H426 269 aaPredicted RBP13.57□□□□□ -0.24
SMAD6-201ENST00000288840 NEURL1O76050 574 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 FABP1P07148 127 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 FGF7P21781 194 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 RNPS1Q15287 305 aaKnown RBP13.57□□□□□ -0.24
SMAD6-201ENST00000288840 FBXW9Q5XUX1 488 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 OR10P1Q8NGE3 313 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 TMEM204Q9BSN7 226 aa13.57□□□□□ -0.24
SMAD6-201ENST00000288840 C9orf152Q5JTZ5 239 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 GLRX2Q9NS18 164 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 MIOXQ9UGB7 285 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 LAMP3Q9UQV4 416 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 ST8SIA5O15466 376 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 SPRY3O43610 288 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 C20orf204Q6ZNR8 217 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 OR5B21A6NL26 309 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 B4E171 279 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 FCGR3BO75015 233 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 FABP4P15090 132 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 TSPAN7P41732 249 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 ZNF83P51522 516 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 ERVK-16P61578 105 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 OR8B8Q15620 311 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 COMMD1Q8N668 190 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms