RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 TNFSF11O14788 317 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 SSSCA1O60232 199 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 MMP7P09237 267 aaPredicted RBP8.89□□□□□ -0.99
SKA1-201ENST00000285116 BCL2P10415 239 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 ZNF32P17041 273 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 TAS2R30P59541 319 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 PSG4Q00888 419 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 ZNF880Q6PDB4 577 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 LINC00596Q86U02 117 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 OR5D13Q8NGL4 314 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 HIST1H2AAQ96QV6 131 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 P2RX4Q99571 388 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 PYGO2Q9BRQ0 406 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 Q9N2K0 584 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 P4HTMQ9NXG6 502 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 LRFN1Q9P244 771 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 K7ESF4 209 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 ZNF205O95201 554 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 EPHA1P21709 976 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 PDLIM4P50479 330 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 RUNX1Q01196 453 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 ZNF92Q03936 586 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 TRA2AQ13595 282 aaKnown RBP eCLIP8.88□□□□□ -0.99
SKA1-201ENST00000285116 IQCJQ1A5X6 159 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 MPV17LQ2QL34 196 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 TGIF2LYQ8IUE0 185 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 PLPPR1Q8TBJ4 325 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 SIGLEC12Q96PQ1 595 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 ATP5SQ99766 215 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 WNT16Q9UBV4 365 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 ADGRG4Q8IZF6 3080 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 FAM221AA4D161 298 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 MARCH11A6NNE9 402 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 H0Y980 276 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 KLF7O75840 302 aaPredicted RBP8.88□□□□□ -0.99
SKA1-201ENST00000285116 CST7O76096 145 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 MBP02144 154 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 MDKP21741 143 aaPredicted RBP8.88□□□□□ -0.99
SKA1-201ENST00000285116 VDAC1P21796 283 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 CCKARP32238 428 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 IL24Q13007 206 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 ODF3L1Q8IXM7 274 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 IL22RA1Q8N6P7 574 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 SUMF1Q8NBK3 374 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 AGBL5Q8NDL9 886 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 TMEM18Q96B42 140 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 FOXB1Q99853 325 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 ARRDC1-AS1Q9H2J1 176 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 RIMS4Q9H426 269 aaPredicted RBP8.88□□□□□ -0.99
SKA1-201ENST00000285116 RTTNQ86VV8 2226 aa8.88□□□□□ -0.99
SKA1-201ENST00000285116 IGHEP01854 428 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 ERVFC1-1P60608 527 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 ZXDAP98168 799 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 CYB5R2Q6BCY4 276 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 TBC1D26Q86UD7 250 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 TMEM217Q8N7C4 229 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 LINC00470Q9BZP3 86 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 GPR35Q9HC97 309 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 GAB2Q9UQC2 676 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 KIR2DS1A0A191URI9 304 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 ZFP92A6NM28 416 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 SS18L1O75177 396 aaPredicted RBP8.87□□□□□ -0.99
SKA1-201ENST00000285116 CRYABP02511 175 aaKnown RBP8.87□□□□□ -0.99
SKA1-201ENST00000285116 METTL15P1P0C7V9 234 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 EDN3P14138 238 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 ZNF25P17030 456 aaPredicted RBP8.87□□□□□ -0.99
SKA1-201ENST00000285116 NTF4P34130 210 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 KIR2DS4P43632 304 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 NPBWR2P48146 333 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 FGF12P61328 243 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 PAX5Q02548 391 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 CLN3Q13286 438 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 PMS2P11Q13670 270 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 KIR2DS1Q14954 304 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 PLCXD3Q63HM9 321 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 AAED1Q7RTV5 226 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 ZNF695Q8IW36 515 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 OR2Y1Q8NGV0 311 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 DYRK2Q92630 601 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 RNF115Q9Y4L5 304 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 COL6A6A6NMZ7 2263 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 PFN1P07737 140 aaKnown RBP8.87□□□□□ -0.99
SKA1-201ENST00000285116 CELA2AP08217 269 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 TDGF1P3P51864 188 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 CARD18P57730 90 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 ZNF787Q6DD87 383 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 RPS19BP1Q86WX3 136 aaKnown RBP8.87□□□□□ -0.99
SKA1-201ENST00000285116 ZNF611Q8N823 705 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 EXTL1Q92935 676 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 PARD6GQ9BYG4 376 aaPredicted RBP8.87□□□□□ -0.99
SKA1-201ENST00000285116 MAGT1Q9H0U3 335 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 SLC7A10Q9NS82 523 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 OCIAD1Q9NX40 245 aa8.87□□□□□ -0.99
SKA1-201ENST00000285116 UBE2J1Q9Y385 318 aaPredicted RBP8.87□□□□□ -0.99
SKA1-201ENST00000285116 NCKAP5O14513 1909 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 POLEQ07864 2286 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 IGKV3D-15A0A087WSY6 115 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 NPIPB11E5RHQ5 1161 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 PPP5D1E7EU14 171 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 CXorf66Q5JRM2 361 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms