RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 OR5P3Q8WZ94 311 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 APH1AQ96BI3 265 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 RAB40CQ96S21 281 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 ATP5SQ99766 215 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 CABLES2Q9BTV7 478 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 PKIBQ9C010 78 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 TREM2Q9NZC2 230 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 OR2W1Q9Y3N9 320 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 RNF115Q9Y4L5 304 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 HECTD1Q9ULT8 2610 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 LRRK2Q5S007 2527 aa10.99□□□□□ -0.65
C9orf3-201ENST00000277198 SETXQ7Z333 2677 aaKnown RBP10.98□□□□□ -0.65
C9orf3-201ENST00000277198 IGKV1D-13A0A0B4J2D9 117 aa10.98□□□□□ -0.65
C9orf3-201ENST00000277198 IGKV1-6A0A0C4DH72 117 aa10.98□□□□□ -0.65
C9orf3-201ENST00000277198 ANKRD30BLA7E2S9 258 aa10.98□□□□□ -0.65
C9orf3-201ENST00000277198 IGHV3-9P01782 118 aa10.98□□□□□ -0.65
C9orf3-201ENST00000277198 HLA-HP01893 362 aa10.98□□□□□ -0.65
C9orf3-201ENST00000277198 IGKV1-13P0DP09 117 aa10.98□□□□□ -0.65
C9orf3-201ENST00000277198 ZNF14P17017 642 aaPredicted RBP10.98□□□□□ -0.65
C9orf3-201ENST00000277198 CCNOP22674 350 aa10.98□□□□□ -0.65
C9orf3-201ENST00000277198 AKR1C3P42330 323 aa10.98□□□□□ -0.65
C9orf3-201ENST00000277198 GNG3P63215 75 aa10.98□□□□□ -0.65
C9orf3-201ENST00000277198 KRBOX4Q5JUW0 171 aa10.98□□□□□ -0.65
C9orf3-201ENST00000277198 SPINK14Q6IE38 97 aa10.98□□□□□ -0.65
C9orf3-201ENST00000277198 IGFL2Q6UWQ7 119 aa10.98□□□□□ -0.65
C9orf3-201ENST00000277198 STX12Q86Y82 276 aa10.98□□□□□ -0.65
C9orf3-201ENST00000277198 TUSC5Q8IXB3 177 aa10.98□□□□□ -0.65
C9orf3-201ENST00000277198 CISD2Q8N5K1 135 aaKnown RBP10.98□□□□□ -0.65
C9orf3-201ENST00000277198 OR10G4Q8NGN3 311 aa10.98□□□□□ -0.65
C9orf3-201ENST00000277198 MRPL30Q8TCC3 161 aaKnown RBP10.98□□□□□ -0.65
C9orf3-201ENST00000277198 CCL28Q9NRJ3 127 aa10.98□□□□□ -0.65
C9orf3-201ENST00000277198 GLRX2Q9NS18 164 aa10.98□□□□□ -0.65
C9orf3-201ENST00000277198 J3QW42 95 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 DEGS1O15121 323 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 CHST1O43916 411 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 IGHV2-5P01817 119 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 ACAA1P09110 424 aaPredicted RBP10.97□□□□□ -0.65
C9orf3-201ENST00000277198 MDH2P40926 338 aaKnown RBP10.97□□□□□ -0.65
C9orf3-201ENST00000277198 DYNLT3P51808 116 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 TAS2R30P59541 319 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 RPL23AP62750 156 aaKnown RBP10.97□□□□□ -0.65
C9orf3-201ENST00000277198 ZNF506Q5JVG8 444 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 AKR1C8PQ5T2L2 129 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 ABHD17BQ5VST6 288 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 ZNF324BQ6AW86 544 aaPredicted RBP10.97□□□□□ -0.65
C9orf3-201ENST00000277198 Q6ZS92 163 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 MOB1BQ7L9L4 216 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 H1FOOQ8IZA3 346 aaPredicted RBP10.97□□□□□ -0.65
C9orf3-201ENST00000277198 OR10J5Q8NHC4 309 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 LSM10Q969L4 123 aaKnown RBP10.97□□□□□ -0.65
C9orf3-201ENST00000277198 PRRG4Q9BZD6 226 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 SEBOXQ9HB31 216 aaPredicted RBP10.97□□□□□ -0.65
C9orf3-201ENST00000277198 WSB1Q9Y6I7 421 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 A0A096LPE4 126 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 A0A1W2PPH5 198 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 A0A1W2PPZ6 126 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 CXorf65A6NEN9 183 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 A6NLC8 198 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 HSD17B6O14756 317 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 TMEM50AO95807 157 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 IFNA17P01571 189 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 OR13C7P0DN81 318 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 HLA-DRB3P79483 266 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 ACSF3Q4G176 576 aaPredicted RBP10.97□□□□□ -0.65
C9orf3-201ENST00000277198 KHDC3LQ587J8 217 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 ODF3L1Q8IXM7 274 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 ZADH2Q8N4Q0 377 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 ZFP62Q8NB50 900 aaPredicted RBP10.97□□□□□ -0.65
C9orf3-201ENST00000277198 ISOC2Q96AB3 205 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 SNRNP40Q96DI7 357 aaKnown RBP10.97□□□□□ -0.65
C9orf3-201ENST00000277198 YPEL4Q96NS1 127 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 TAAR3PQ9P1P4 343 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 RNF150Q9ULK6 438 aa10.97□□□□□ -0.65
C9orf3-201ENST00000277198 SERPINE2P07093 398 aa10.96□□□□□ -0.65
C9orf3-201ENST00000277198 SRP19P09132 144 aaKnown RBP10.96□□□□□ -0.65
C9orf3-201ENST00000277198 GNLYP22749 145 aa10.96□□□□□ -0.65
C9orf3-201ENST00000277198 OMGP23515 440 aa10.96□□□□□ -0.65
C9orf3-201ENST00000277198 CD200P41217 278 aa10.96□□□□□ -0.65
C9orf3-201ENST00000277198 ASCL1P50553 236 aa10.96□□□□□ -0.65
C9orf3-201ENST00000277198 PAX9P55771 341 aa10.96□□□□□ -0.65
C9orf3-201ENST00000277198 SRSF1Q07955 248 aaKnown RBP eCLIP10.96□□□□□ -0.65
C9orf3-201ENST00000277198 MRPL49Q13405 166 aaKnown RBP10.96□□□□□ -0.65
C9orf3-201ENST00000277198 FAM58AQ8N1B3 248 aa10.96□□□□□ -0.65
C9orf3-201ENST00000277198 FAM24BQ8N5W8 94 aa10.96□□□□□ -0.65
C9orf3-201ENST00000277198 HS3ST6Q96QI5 342 aa10.96□□□□□ -0.65
C9orf3-201ENST00000277198 RARRES2Q99969 163 aa10.96□□□□□ -0.65
C9orf3-201ENST00000277198 C20orf24Q9BUV8 137 aa10.96□□□□□ -0.65
C9orf3-201ENST00000277198 MAGT1Q9H0U3 335 aa10.96□□□□□ -0.65
C9orf3-201ENST00000277198 CALHM2Q9HA72 323 aa10.96□□□□□ -0.65
C9orf3-201ENST00000277198 UTP20O75691 2785 aaKnown RBP10.96□□□□□ -0.65
C9orf3-201ENST00000277198 ARID1AO14497 2285 aa10.96□□□□□ -0.66
C9orf3-201ENST00000277198 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.96□□□□□ -0.66
C9orf3-201ENST00000277198 GPR37O15354 613 aa10.96□□□□□ -0.66
C9orf3-201ENST00000277198 TXNL1O43396 289 aa10.96□□□□□ -0.66
C9orf3-201ENST00000277198 SYNGR1O43759 233 aa10.96□□□□□ -0.66
C9orf3-201ENST00000277198 OR2C1O95371 312 aa10.96□□□□□ -0.66
C9orf3-201ENST00000277198 IFNA5P01569 189 aa10.96□□□□□ -0.66
C9orf3-201ENST00000277198 APLNRP35414 380 aa10.96□□□□□ -0.66
C9orf3-201ENST00000277198 RPS23P62266 143 aaKnown RBP10.96□□□□□ -0.66
C9orf3-201ENST00000277198 SRYQ05066 204 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms