RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 SYNGR3O43761 229 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 ZNF883P0CG24 379 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 SLC25A6P12236 298 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 MOGAT3Q86VF5 341 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 NTNG2Q96CW9 530 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 RAB40CQ96S21 281 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 FREM2Q5SZK8 3169 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 NKX6-3A6NJ46 265 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 CRYABP02511 175 aaKnown RBP12.32□□□□□ -0.44
TMEM47-201ENST00000275954 G6PCP35575 357 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 SSTP61278 116 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 SNRPEP62304 92 aaKnown RBP12.32□□□□□ -0.44
TMEM47-201ENST00000275954 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.32□□□□□ -0.44
TMEM47-201ENST00000275954 MFSD2BA6NFX1 497 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 ERVS71-1P61550 626 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 HLA-DRB3P79483 266 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 HTD2P86397 168 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 AWAT1Q58HT5 328 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 SLC25A53Q5H9E4 307 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 OR10X1Q8NGY0 326 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 LOC102723996A0A087X1L8 192 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 A0A1W2PPQ1 181 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 ST8SIA5O15466 376 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 COX5AP20674 150 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 PTGDSP41222 190 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 FAM214BQ7L5A3 538 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 ZIC4Q8N9L1 334 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 C12orf57Q99622 126 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 OPN3Q9H1Y3 402 aaPredicted RBP12.31□□□□□ -0.44
TMEM47-201ENST00000275954 BPTFQ12830 3046 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 LY6G6EA0A0G2JKS1 128 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 ZNF705FA8MVS1 300 aaPredicted RBP12.31□□□□□ -0.44
TMEM47-201ENST00000275954 PPP1R2P9O14990 202 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 ZNF735P0CB33 412 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 ZNF705DP0CH99 300 aaPredicted RBP12.31□□□□□ -0.44
TMEM47-201ENST00000275954 ZNF705BP0CI00 300 aaPredicted RBP12.31□□□□□ -0.44
TMEM47-201ENST00000275954 P2RY1P47900 373 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 FOXO1Q12778 655 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 MOB1BQ7L9L4 216 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 TMEM252Q8N6L7 170 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 ABHD14BQ96IU4 210 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 RSRP1Q9BUV0 290 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 ZNF703Q9H7S9 590 aaPredicted RBP12.31□□□□□ -0.44
TMEM47-201ENST00000275954 U3KQA8 63 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 RNF222A6NCQ9 220 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 RHBDL1O75783 438 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 CDS2O95674 445 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 UCP2P55851 309 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 KLF3P57682 345 aaPredicted RBP12.31□□□□□ -0.44
TMEM47-201ENST00000275954 SMUG1Q53HV7 270 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 RAB39BQ96DA2 213 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 DLL3Q9NYJ7 618 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 NDRG3Q9UGV2 375 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 NPTNQ9Y639 398 aa12.31□□□□□ -0.44
TMEM47-201ENST00000275954 TRGV10A0A0A0MS01 117 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 hCG_1809904A0A1W2PP81 198 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 A0A1W2PR64 198 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 A0A1W2PRV1 198 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 CRYM-AS1A6NIL9 109 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 A8MXE2 369 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 ZNF708P17019 499 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 F2RP25116 425 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 ACTR3CQ9C0K3 210 aaPredicted RBP12.3□□□□□ -0.44
TMEM47-201ENST00000275954 MYO15AQ9UKN7 3530 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 MAP1AP78559 2803 aaPredicted RBP12.3□□□□□ -0.44
TMEM47-201ENST00000275954 hCG_38984A0A1B0GV85 526 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 C7orf77A4D0Y5 90 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 MAP1LC3B2A6NCE7 125 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 C1QTNF9BB2RNN3 333 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 C1QTNF9P0C862 333 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 HKR1P10072 659 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 MGST1P10620 155 aaKnown RBP12.3□□□□□ -0.44
TMEM47-201ENST00000275954 HES1Q14469 280 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 OR52L2PQ8NGH6 319 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 GMPPAQ96IJ6 420 aaPredicted RBP12.3□□□□□ -0.44
TMEM47-201ENST00000275954 RTBDNQ9BSG5 229 aaPredicted RBP12.3□□□□□ -0.44
TMEM47-201ENST00000275954 MAP1LC3BQ9GZQ8 125 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 ATPIF1Q9UII2 106 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 DOCK11Q5JSL3 2073 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 OR7C2O60412 319 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 OR2H2O95918 312 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 C5orf24Q7Z6I8 188 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 TP53RKQ96S44 253 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 COMMD5Q9GZQ3 224 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 CXXC4Q9H2H0 198 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 HEXA-AS1Q9H8Q6 139 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 OR1A1Q9P1Q5 309 aa12.3□□□□□ -0.44
TMEM47-201ENST00000275954 A0A1W2PPH5 198 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 DEDDO75618 318 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 APOA2P02652 100 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 FFAR4Q5NUL3 377 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 ATRAIDQ6UW56 229 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 RBMXL3Q8N7X1 1067 aaKnown RBP12.29□□□□□ -0.44
TMEM47-201ENST00000275954 NRIP2Q9BQI9 281 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 RSG1Q9BU20 258 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 PATZ1Q9HBE1 687 aaKnown RBP12.29□□□□□ -0.44
TMEM47-201ENST00000275954 MDFIC2A0A1B0GVS7 189 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 CD8AP01732 235 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 NPBWR1P48145 328 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 GNB1P62873 340 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms