RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 SPINK9Q5DT21 86 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 CST9LP1Q5W188 147 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 TMPRSS7Q7RTY8 843 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 FAM185AQ8N0U4 392 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 ZNF845Q96IR2 970 aaPredicted RBP11.02□□□□□ -0.65
COL8A1-202ENST00000273342 FOXB1Q99853 325 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 C2orf88Q9BSF0 95 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 NDUFAF3Q9BU61 184 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 WNT5BQ9H1J7 359 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 TMEM38BQ9NVV0 291 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 VAX2Q9UIW0 290 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 ZNF816-ZNF321PA0A0X1KG74 233 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 C10orf142B7Z368 130 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 GUSBP11Q6P575 273 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 RPP25LQ8N5L8 163 aaKnown RBP11.02□□□□□ -0.65
COL8A1-202ENST00000273342 FADS6Q8N9I5 356 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 CPEB3Q8NE35 698 aaKnown RBP11.02□□□□□ -0.65
COL8A1-202ENST00000273342 OR10V1Q8NGI7 309 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 OR5R1Q8NH85 324 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 HLA-CQ95604 372 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 RARRES3Q9UL19 164 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 EXPH5Q8NEV8 1989 aa11.02□□□□□ -0.65
COL8A1-202ENST00000273342 A0A0G2JMM0 328 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 A0A1W2PPB8 328 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 A0A1W2PRS3 328 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 KIR3DP1A8MWS1 328 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 SYNGR2O43760 224 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 IGLV3-19P01714 112 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 HNF1AP20823 631 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 PAX5Q02548 391 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 TEX38Q6PEX7 206 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 SNHG12Q9BXW3 62 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 OR2H1Q9GZK4 316 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 FGF23Q9GZV9 251 aaPredicted RBP11.01□□□□□ -0.65
COL8A1-202ENST00000273342 SRD5A3Q9H8P0 318 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 MTCH1Q9NZJ7 389 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 PGPEP1LA6NFU8 196 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 DVL1O14640 695 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 PFN1P07737 140 aaKnown RBP11.01□□□□□ -0.65
COL8A1-202ENST00000273342 CEACAM1P13688 526 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 RPL29P47914 159 aaKnown RBP11.01□□□□□ -0.65
COL8A1-202ENST00000273342 NUBP1P53384 320 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 RPL23P62829 140 aaKnown RBP11.01□□□□□ -0.65
COL8A1-202ENST00000273342 ASCL4Q6XD76 172 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 ZNF525Q8N782 197 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 ABHD3Q8WU67 409 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 IGLV3-32A0A0A0MS00 114 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 A6NNC1 897 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 TUSC2O75896 110 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 CRYAAP02489 173 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 VASH2Q86V25 355 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 OR51G1Q8NGK1 321 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 MRPL30Q8TCC3 161 aaKnown RBP11.01□□□□□ -0.65
COL8A1-202ENST00000273342 MRPL37Q9BZE1 423 aaKnown RBP11.01□□□□□ -0.65
COL8A1-202ENST00000273342 PARLQ9H300 379 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 OCIAD1Q9NX40 245 aa11.01□□□□□ -0.65
COL8A1-202ENST00000273342 DNAJC13O75165 2243 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 LOC102725191A0A1B0GVB3 256 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 KIAA1324LA8MWY0 1029 aaPredicted RBP11□□□□□ -0.65
COL8A1-202ENST00000273342 C1QTNF9BB2RNN3 333 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 CLDN1O95832 211 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 IGKV1-39P01597 117 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 IGKV1D-39P04432 117 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 ZNF25P17030 456 aaPredicted RBP11□□□□□ -0.65
COL8A1-202ENST00000273342 CARD18P57730 90 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 UBE2G2P60604 165 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 NUTF2P61970 127 aaKnown RBP11□□□□□ -0.65
COL8A1-202ENST00000273342 MEF2BQ02080 365 aaPredicted RBP11□□□□□ -0.65
COL8A1-202ENST00000273342 SRYQ05066 204 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 PRDX4Q13162 271 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 RAB30Q15771 203 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 BATFQ16520 125 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 TMEM42Q69YG0 159 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 SYT13Q7L8C5 426 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 PNPLA5Q7Z6Z6 429 aaPredicted RBP11□□□□□ -0.65
COL8A1-202ENST00000273342 OR10J5Q8NHC4 309 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 PLSCR2Q9NRY7 297 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 NAT8Q9UHE5 227 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 RNF150Q9ULK6 438 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 SVILO95425 2214 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 IGLV3-12A0A075B6K2 115 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 C5orf49A4QMS7 147 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 ZNF705FA8MVS1 300 aaPredicted RBP11□□□□□ -0.65
COL8A1-202ENST00000273342 VAMP5O95183 116 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 ZNF705DP0CH99 300 aaPredicted RBP11□□□□□ -0.65
COL8A1-202ENST00000273342 ZNF705BP0CI00 300 aaPredicted RBP11□□□□□ -0.65
COL8A1-202ENST00000273342 LIFP15018 202 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 BTNL3Q6UXE8 466 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 RABEPKQ7Z6M1 372 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 MRGPRGQ86SM5 289 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 TMEM256Q8N2U0 113 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 OR5D13Q8NGL4 314 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 RNF138Q8WVD3 245 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 TMEM204Q9BSN7 226 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 IL17BQ9UHF5 180 aa11□□□□□ -0.65
COL8A1-202ENST00000273342 USF3Q68DE3 2245 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 MKRN2OSH3BPM6 223 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 FAM53AQ6NSI3 398 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-202ENST00000273342 ZNF705AQ6ZN79 300 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-202ENST00000273342 ADGRG7Q96K78 797 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms