RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 TMEM222Q9H0R3 208 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 METTL8Q9H825 291 aaKnown RBP10.07□□□□□ -0.8
SDE2-201ENST00000272091 TNFSF18Q9UNG2 199 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 USP24Q9UPU5 2620 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 TMEM178BH3BS89 294 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 TNFRSF13BO14836 293 aaPredicted RBP10.07□□□□□ -0.8
SDE2-201ENST00000272091 CGB3P0DN86 165 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 CGB7P0DN87 165 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 RPA2P15927 270 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 GALNT11Q8NCW6 608 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 C2orf50Q96LR7 162 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 KCNIP1Q9NZI2 227 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 MBD2Q9UBB5 411 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 CFAP46Q8IYW2 2715 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 DCHS2Q6V1P9 2916 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 B9A039 149 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 P2RX3P56373 397 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 TMEM65Q6PI78 240 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 TMUB2Q71RG4 321 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 GALMQ96C23 342 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 KCNIP3Q9Y2W7 256 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 NBASA2RRP1 2371 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 CFDP00746 253 aaPredicted RBP10.07□□□□□ -0.8
SDE2-201ENST00000272091 EIF4EBP1Q13541 118 aaPredicted RBP10.07□□□□□ -0.8
SDE2-201ENST00000272091 OPCMLQ14982 345 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 TMEM56Q96MV1 263 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 TMEM56-RWDD3S4R434 201 aa10.07□□□□□ -0.8
SDE2-201ENST00000272091 DIDO1Q9BTC0 2240 aaKnown RBP10.06□□□□□ -0.8
SDE2-201ENST00000272091 IGHV3-43A0A0B4J1X8 118 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 IGHV3-43DP0DP04 118 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 LYL1P12980 280 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 MUC1P15941 1255 aaPredicted RBP10.06□□□□□ -0.8
SDE2-201ENST00000272091 PSMB6P28072 239 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 PPP1CCP36873 323 aaKnown RBP10.06□□□□□ -0.8
SDE2-201ENST00000272091 LUMP51884 338 aaPredicted RBP10.06□□□□□ -0.8
SDE2-201ENST00000272091 FGL1Q08830 312 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 SLC35G3Q8N808 338 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 RFESDQ8TAC1 157 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 OR5AC2Q9NZP5 309 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 A0A1W2PPR1 153 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 L7N2F9 121 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 RAB32Q13637 225 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 SELENOHQ8IZQ5 122 aaKnown RBP10.06□□□□□ -0.8
SDE2-201ENST00000272091 ARL11Q969Q4 196 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 RRNAD1Q96FB5 475 aaKnown RBP10.06□□□□□ -0.8
SDE2-201ENST00000272091 DYNLRB1Q9NP97 96 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 FBXO9Q9UK97 447 aaPredicted RBP10.06□□□□□ -0.8
SDE2-201ENST00000272091 LRBAP50851 2863 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 ROS1P08922 2347 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 C19orf84I3L1E1 186 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 HSPA12AO43301 675 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 WNT2P09544 360 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 OR8U9P0C7N5 309 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 C17orf58Q2M2W7 97 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 TEX261Q6UWH6 196 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 ZNF546Q86UE3 836 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 OR8U1Q8NH10 309 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 LRRC46Q96FV0 321 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 DNTTIP1Q9H147 329 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 TMEM106BQ9NUM4 274 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 U3KQ87 197 aa10.06□□□□□ -0.8
SDE2-201ENST00000272091 SIGLEC5O15389 551 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 CLDN14O95500 239 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 UCP1P25874 307 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 MEX3BQ6ZN04 569 aaKnown RBP10.05□□□□□ -0.8
SDE2-201ENST00000272091 MUC15Q8N387 334 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 DRAM1Q8N682 238 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 EGLN1Q9GZT9 426 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 ZNF665Q9H7R5 613 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 VSTM5A8MXK1 200 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 H0Y980 276 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 IRF2P14316 349 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 IL2RGP31785 369 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 LOXL3P58215 753 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 IAH1Q2TAA2 248 aaPredicted RBP10.05□□□□□ -0.8
SDE2-201ENST00000272091 LGI3Q8N145 548 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 COMMD9Q9P000 198 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 LGALS8O00214 317 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 CDS2O95674 445 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 F2RP25116 425 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 S100A11P31949 105 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 EDDM3BP56851 147 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 C14orf79Q96F83 325 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 MFFQ9GZY8 342 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 MS4A5Q9H3V2 200 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 NCOR1P1Q9H4R4 102 aa10.05□□□□□ -0.8
SDE2-201ENST00000272091 IGKV1-39P01597 117 aa10.04□□□□□ -0.8
SDE2-201ENST00000272091 IGKV1D-39P04432 117 aa10.04□□□□□ -0.8
SDE2-201ENST00000272091 HTD2P86397 168 aa10.04□□□□□ -0.8
SDE2-201ENST00000272091 CYCSP99999 105 aaKnown RBP10.04□□□□□ -0.8
SDE2-201ENST00000272091 TMEM268Q5VZI3 342 aa10.04□□□□□ -0.8
SDE2-201ENST00000272091 ZNF808Q8N4W9 903 aaPredicted RBP10.04□□□□□ -0.8
SDE2-201ENST00000272091 OR52M1Q8NGK5 317 aa10.04□□□□□ -0.8
SDE2-201ENST00000272091 CCL17Q92583 94 aa10.04□□□□□ -0.8
SDE2-201ENST00000272091 PKDREJQ9NTG1 2253 aa10.04□□□□□ -0.8
SDE2-201ENST00000272091 F2RL2O00254 374 aa10.04□□□□□ -0.8
SDE2-201ENST00000272091 TRAT1Q6PIZ9 186 aa10.04□□□□□ -0.8
SDE2-201ENST00000272091 LYPD2Q6UXB3 125 aa10.04□□□□□ -0.8
SDE2-201ENST00000272091 AGMATQ9BSE5 352 aa10.04□□□□□ -0.8
SDE2-201ENST00000272091 FAM234AQ9H0X4 552 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms