RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 SLC23A1Q9UHI7 598 aa20.42■□□□□ 0.86
SSBP4-201ENST00000270061 PCDHB10Q9UN67 800 aa20.42■□□□□ 0.86
SSBP4-201ENST00000270061 SFT2D2O95562 160 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 HLA-GP17693 338 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 RCC1P18754 421 aaPredicted RBP20.41■□□□□ 0.86
SSBP4-201ENST00000270061 TNFRSF1AP19438 455 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 SEC61A1P61619 476 aaKnown RBP20.41■□□□□ 0.86
SSBP4-201ENST00000270061 HERPUD1Q15011 391 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 C2orf68Q2NKX9 166 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 CD177Q8N6Q3 437 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 HYLS1Q96M11 299 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 CABLES2Q9BTV7 478 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 TMEM30CPA0ZSE6 113 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 SLC22A5O76082 557 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 ZNF728P0DKX0 622 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 RAP2BP61225 183 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 COL10A1Q03692 680 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 ATXN7L3Q14CW9 347 aaPredicted RBP20.41■□□□□ 0.86
SSBP4-201ENST00000270061 KCNJ8Q15842 424 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 LINC01356Q8N9X3 169 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 UXS1Q8NBZ7 420 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 OR11L1Q8NGX0 322 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 CLDND2Q8NHS1 167 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 DNAJB11Q9UBS4 358 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 WNK2Q9Y3S1 2297 aa20.41■□□□□ 0.86
SSBP4-201ENST00000270061 MXRA5Q9NR99 2828 aa20.4■□□□□ 0.86
SSBP4-201ENST00000270061 A0A0B4J2A0 478 aa20.4■□□□□ 0.86
SSBP4-201ENST00000270061 IGKV1-6A0A0C4DH72 117 aa20.4■□□□□ 0.86
SSBP4-201ENST00000270061 TUSC2O75896 110 aa20.4■□□□□ 0.86
SSBP4-201ENST00000270061 DIRAS3O95661 229 aa20.4■□□□□ 0.86
SSBP4-201ENST00000270061 RPS2P15880 293 aaKnown RBP20.4■□□□□ 0.86
SSBP4-201ENST00000270061 PI3P19957 117 aa20.4■□□□□ 0.86
SSBP4-201ENST00000270061 VAMP1P23763 118 aa20.4■□□□□ 0.86
SSBP4-201ENST00000270061 OR3A1P47881 315 aa20.4■□□□□ 0.86
SSBP4-201ENST00000270061 LPCAT3Q6P1A2 487 aa20.4■□□□□ 0.86
SSBP4-201ENST00000270061 CCL17Q92583 94 aa20.4■□□□□ 0.86
SSBP4-201ENST00000270061 SHARPINQ9H0F6 387 aa20.4■□□□□ 0.86
SSBP4-201ENST00000270061 SHPKQ9UHJ6 478 aa20.4■□□□□ 0.86
SSBP4-201ENST00000270061 TRAPPC2LQ9UL33 140 aa20.4■□□□□ 0.86
SSBP4-201ENST00000270061 IGKV1D-17A0A075B6S4 117 aa20.39■□□□□ 0.86
SSBP4-201ENST00000270061 NPIPB11E5RHQ5 1161 aa20.39■□□□□ 0.86
SSBP4-201ENST00000270061 SMLR1H3BR10 107 aa20.39■□□□□ 0.86
SSBP4-201ENST00000270061 GOSR2O14653 212 aa20.39■□□□□ 0.86
SSBP4-201ENST00000270061 PPYP01298 95 aa20.39■□□□□ 0.86
SSBP4-201ENST00000270061 AADACP22760 399 aa20.39■□□□□ 0.86
SSBP4-201ENST00000270061 HERV-K104P61576 105 aa20.39■□□□□ 0.86
SSBP4-201ENST00000270061 SUPT4H1P63272 117 aaKnown RBP20.39■□□□□ 0.86
SSBP4-201ENST00000270061 SLC38A6Q8IZM9 456 aa20.39■□□□□ 0.86
SSBP4-201ENST00000270061 ZNF486Q96H40 463 aaPredicted RBP20.39■□□□□ 0.86
SSBP4-201ENST00000270061 LPAR3Q9UBY5 353 aa20.39■□□□□ 0.86
SSBP4-201ENST00000270061 TRBV6-7A0A0A0MS04 114 aa20.39■□□□□ 0.85
SSBP4-201ENST00000270061 ZNF737O75373 536 aa20.39■□□□□ 0.85
SSBP4-201ENST00000270061 ZNF205O95201 554 aa20.39■□□□□ 0.85
SSBP4-201ENST00000270061 NFYAP23511 347 aaPredicted RBP20.39■□□□□ 0.85
SSBP4-201ENST00000270061 H2BFSP57053 126 aa20.39■□□□□ 0.85
SSBP4-201ENST00000270061 HMGN3Q15651 99 aa20.39■□□□□ 0.85
SSBP4-201ENST00000270061 TIMD4Q96H15 378 aa20.39■□□□□ 0.85
SSBP4-201ENST00000270061 C1orf159Q96HA4 380 aa20.39■□□□□ 0.85
SSBP4-201ENST00000270061 METRNQ9UJH8 293 aa20.39■□□□□ 0.85
SSBP4-201ENST00000270061 PPP1R3CQ9UQK1 317 aa20.39■□□□□ 0.85
SSBP4-201ENST00000270061 DBX1A6NMT0 343 aa20.38■□□□□ 0.85
SSBP4-201ENST00000270061 BET1O15155 118 aa20.38■□□□□ 0.85
SSBP4-201ENST00000270061 AVPI1Q5T686 147 aa20.38■□□□□ 0.85
SSBP4-201ENST00000270061 C5orf24Q7Z6I8 188 aa20.38■□□□□ 0.85
SSBP4-201ENST00000270061 OR5T2Q8NGG2 359 aa20.38■□□□□ 0.85
SSBP4-201ENST00000270061 RSRP1Q9BUV0 290 aa20.38■□□□□ 0.85
SSBP4-201ENST00000270061 SRSF4Q08170 494 aaKnown RBP20.37■□□□□ 0.85
SSBP4-201ENST00000270061 OR5M8Q8NGP6 311 aa20.37■□□□□ 0.85
SSBP4-201ENST00000270061 OR2T35Q8NGX2 323 aa20.37■□□□□ 0.85
SSBP4-201ENST00000270061 ANGPTL6Q8NI99 470 aa20.37■□□□□ 0.85
SSBP4-201ENST00000270061 PPP1R35Q8TAP8 253 aa20.37■□□□□ 0.85
SSBP4-201ENST00000270061 RAB1CQ92928 201 aa20.37■□□□□ 0.85
SSBP4-201ENST00000270061 TOMM40LQ969M1 308 aa20.37■□□□□ 0.85
SSBP4-201ENST00000270061 COQ2Q96H96 371 aa20.37■□□□□ 0.85
SSBP4-201ENST00000270061 SNX22Q96L94 193 aa20.37■□□□□ 0.85
SSBP4-201ENST00000270061 CHIAQ9BZP6 476 aa20.37■□□□□ 0.85
SSBP4-201ENST00000270061 FAM172BPA6NC97 362 aa20.36■□□□□ 0.85
SSBP4-201ENST00000270061 CRYM-AS1A6NIL9 109 aa20.36■□□□□ 0.85
SSBP4-201ENST00000270061 KIAA1324LA8MWY0 1029 aaPredicted RBP20.36■□□□□ 0.85
SSBP4-201ENST00000270061 B4DSR2 109 aa20.36■□□□□ 0.85
SSBP4-201ENST00000270061 FAM157CP0CG43 387 aa20.36■□□□□ 0.85
SSBP4-201ENST00000270061 IRF2P14316 349 aa20.36■□□□□ 0.85
SSBP4-201ENST00000270061 FXYD4P59646 89 aa20.36■□□□□ 0.85
SSBP4-201ENST00000270061 LY6G6FQ5SQ64 297 aa20.36■□□□□ 0.85
SSBP4-201ENST00000270061 C11orf88Q6PI97 169 aa20.36■□□□□ 0.85
SSBP4-201ENST00000270061 BOLLQ8N9W6 283 aaKnown RBP20.36■□□□□ 0.85
SSBP4-201ENST00000270061 CASTOR1Q8WTX7 329 aa20.36■□□□□ 0.85
SSBP4-201ENST00000270061 OPN4Q9UHM6 478 aa20.36■□□□□ 0.85
SSBP4-201ENST00000270061 G3V3Q6 166 aa20.36■□□□□ 0.85
SSBP4-201ENST00000270061 RGS11O94810 467 aa20.36■□□□□ 0.85
SSBP4-201ENST00000270061 FAM120AOSQ5T036 256 aa20.36■□□□□ 0.85
SSBP4-201ENST00000270061 SGPP2Q8IWX5 399 aa20.36■□□□□ 0.85
SSBP4-201ENST00000270061 OR10J5Q8NHC4 309 aa20.36■□□□□ 0.85
SSBP4-201ENST00000270061 SIX6O95475 246 aa20.35■□□□□ 0.85
SSBP4-201ENST00000270061 MUC1P15941 1255 aaPredicted RBP20.35■□□□□ 0.85
SSBP4-201ENST00000270061 HNF1AP20823 631 aa20.35■□□□□ 0.85
SSBP4-201ENST00000270061 RBMXP38159 391 aaKnown RBP20.35■□□□□ 0.85
SSBP4-201ENST00000270061 PIGPP57054 158 aa20.35■□□□□ 0.85
SSBP4-201ENST00000270061 LMO4P61968 165 aa20.35■□□□□ 0.85
SSBP4-201ENST00000270061 AESQ08117 197 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms