RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 TALDO1P37837 337 aa10.33□□□□□ -0.76
SS18-202ENST00000269138 ZNF134P52741 427 aa10.33□□□□□ -0.76
SS18-202ENST00000269138 PRRX1P54821 245 aa10.33□□□□□ -0.76
SS18-202ENST00000269138 ARL6IP1Q15041 203 aa10.33□□□□□ -0.76
SS18-202ENST00000269138 SLC9A3R2Q15599 337 aa10.33□□□□□ -0.76
SS18-202ENST00000269138 SSX2Q16385 188 aa10.33□□□□□ -0.76
SS18-202ENST00000269138 HLA-DRB5Q30154 266 aa10.33□□□□□ -0.76
SS18-202ENST00000269138 PLA1AQ53H76 456 aa10.33□□□□□ -0.76
SS18-202ENST00000269138 MZT2AQ6P582 158 aa10.33□□□□□ -0.76
SS18-202ENST00000269138 BEND2Q8NDZ0 799 aa10.33□□□□□ -0.76
SS18-202ENST00000269138 ZNF596Q8TC21 504 aa10.33□□□□□ -0.76
SS18-202ENST00000269138 IL1F10Q8WWZ1 152 aa10.33□□□□□ -0.76
SS18-202ENST00000269138 AP3S1Q92572 193 aa10.33□□□□□ -0.76
SS18-202ENST00000269138 GALMQ96C23 342 aa10.33□□□□□ -0.76
SS18-202ENST00000269138 MMP28Q9H239 520 aa10.33□□□□□ -0.76
SS18-202ENST00000269138 RAB9BQ9NP90 201 aa10.33□□□□□ -0.76
SS18-202ENST00000269138 CCDC59Q9P031 241 aaKnown RBP10.33□□□□□ -0.76
SS18-202ENST00000269138 RSL24D1Q9UHA3 163 aaKnown RBP10.33□□□□□ -0.76
SS18-202ENST00000269138 TBL2Q9Y4P3 447 aaKnown RBP10.33□□□□□ -0.76
SS18-202ENST00000269138 A0A0A6YYJ9 748 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 IGKV1-6A0A0C4DH72 117 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 DPPA5A6NC42 116 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 TRDCB7Z8K6 153 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 LY6LH3BQJ8 138 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 BUB1B-PAK6H3BSN5 160 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 CTDSP2O14595 271 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 APOA1P02647 267 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 GSTT2P0CG29 244 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 GSTT2BP0CG30 244 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 HTR1DP28221 377 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 SOX6P35712 828 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 IER3P46695 156 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 TAS2R20P59543 309 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 GNG2P59768 71 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 HTD2P86397 168 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 PNLIPRP3Q17RR3 467 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 MORN2Q502X0 79 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 MINOS1Q5TGZ0 78 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 LDLRAD3Q86YD5 345 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 ZNF439Q8NDP4 499 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 MALSU1Q96EH3 234 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 ST6GALNAC5Q9BVH7 336 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 PARP12Q9H0J9 701 aaKnown RBP10.32□□□□□ -0.76
SS18-202ENST00000269138 MEGF9Q9H1U4 602 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 MIXL1Q9H2W2 232 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 OR1A1Q9P1Q5 309 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 DPM3Q9P2X0 92 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 MINOS1-NBL1R4GNA1 71 aa10.32□□□□□ -0.76
SS18-202ENST00000269138 POM121CA8CG34 1229 aa10.31□□□□□ -0.76
SS18-202ENST00000269138 FAM25AB3EWG3 89 aa10.31□□□□□ -0.76
SS18-202ENST00000269138 FAM25CB3EWG5 89 aa10.31□□□□□ -0.76
SS18-202ENST00000269138 FAM25GB3EWG6 89 aa10.31□□□□□ -0.76
SS18-202ENST00000269138 DTYMKP23919 212 aa10.31□□□□□ -0.76
SS18-202ENST00000269138 RAB13P51153 203 aa10.31□□□□□ -0.76
SS18-202ENST00000269138 UBA52P62987 128 aaKnown RBP10.31□□□□□ -0.76
SS18-202ENST00000269138 DIAPH2-AS1Q14236 149 aa10.31□□□□□ -0.76
SS18-202ENST00000269138 HERPUD1Q15011 391 aa10.31□□□□□ -0.76
SS18-202ENST00000269138 CT45A1Q5HYN5 189 aa10.31□□□□□ -0.76
SS18-202ENST00000269138 TMEM69Q5SWH9 247 aa10.31□□□□□ -0.76
SS18-202ENST00000269138 FOXB2Q5VYV0 432 aa10.31□□□□□ -0.76
SS18-202ENST00000269138 CT45A3Q8NHU0 189 aa10.31□□□□□ -0.76
SS18-202ENST00000269138 GCDHQ92947 438 aaPredicted RBP10.31□□□□□ -0.76
SS18-202ENST00000269138 CMTM3Q96MX0 182 aa10.31□□□□□ -0.76
SS18-202ENST00000269138 DCUN1D5Q9BTE7 237 aa10.31□□□□□ -0.76
SS18-202ENST00000269138 SLIRPQ9GZT3 109 aaKnown RBP10.31□□□□□ -0.76
SS18-202ENST00000269138 JPT1Q9UK76 154 aa10.31□□□□□ -0.76
SS18-202ENST00000269138 MGAT4AQ9UM21 535 aa10.31□□□□□ -0.76
SS18-202ENST00000269138 LEUTXA8MZ59 168 aa10.3□□□□□ -0.76
SS18-202ENST00000269138 FABP7O15540 132 aa10.3□□□□□ -0.76
SS18-202ENST00000269138 HLA-DQB1P01920 261 aa10.3□□□□□ -0.76
SS18-202ENST00000269138 FCER2P06734 321 aa10.3□□□□□ -0.76
SS18-202ENST00000269138 PITPNAQ00169 270 aa10.3□□□□□ -0.76
SS18-202ENST00000269138 TMEM30BQ3MIR4 351 aa10.3□□□□□ -0.76
SS18-202ENST00000269138 IGSF11Q5DX21 431 aa10.3□□□□□ -0.76
SS18-202ENST00000269138 TPTE2P1Q5T6R2 138 aa10.3□□□□□ -0.76
SS18-202ENST00000269138 SLC25A48Q6ZT89 311 aaKnown RBP10.3□□□□□ -0.76
SS18-202ENST00000269138 LINC00311Q8N616 119 aa10.3□□□□□ -0.76
SS18-202ENST00000269138 GVQW1Q8N7I0 195 aa10.3□□□□□ -0.76
SS18-202ENST00000269138 OR10X1Q8NGY0 326 aa10.3□□□□□ -0.76
SS18-202ENST00000269138 PIFOQ8TCI5 191 aa10.3□□□□□ -0.76
SS18-202ENST00000269138 SSMEM1Q8WWF3 244 aa10.3□□□□□ -0.76
SS18-202ENST00000269138 JMJD8Q96S16 334 aa10.3□□□□□ -0.76
SS18-202ENST00000269138 SSX3Q99909 188 aa10.3□□□□□ -0.76
SS18-202ENST00000269138 SLC23A1Q9UHI7 598 aa10.3□□□□□ -0.76
SS18-202ENST00000269138 MRPS7Q9Y2R9 242 aaKnown RBP10.3□□□□□ -0.76
SS18-202ENST00000269138 SMIM31A0A1B0GVY4 71 aa10.29□□□□□ -0.76
SS18-202ENST00000269138 MEIS3P1A6NDR6 274 aa10.29□□□□□ -0.76
SS18-202ENST00000269138 H3BUX3 64 aa10.29□□□□□ -0.76
SS18-202ENST00000269138 ZNF701M0R085 212 aaPredicted RBP10.29□□□□□ -0.76
SS18-202ENST00000269138 RGS5O15539 181 aa10.29□□□□□ -0.76
SS18-202ENST00000269138 YPEL1O60688 119 aa10.29□□□□□ -0.76
SS18-202ENST00000269138 MNDAP41218 407 aa10.29□□□□□ -0.76
SS18-202ENST00000269138 LRRC75BQ2VPJ9 315 aa10.29□□□□□ -0.76
SS18-202ENST00000269138 STEAP3Q658P3 488 aa10.29□□□□□ -0.76
SS18-202ENST00000269138 LAX1Q8IWV1 398 aa10.29□□□□□ -0.76
SS18-202ENST00000269138 C8orf31Q8N9H6 132 aa10.29□□□□□ -0.76
SS18-202ENST00000269138 OR4A4PQ8NGN8 299 aa10.29□□□□□ -0.76
SS18-202ENST00000269138 YPEL2Q96QA6 119 aa10.29□□□□□ -0.76
SS18-202ENST00000269138 OCSTAMPQ9BR26 566 aa10.29□□□□□ -0.76
SS18-202ENST00000269138 CHIAQ9BZP6 476 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms