RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 VAX2Q9UIW0 290 aa11.05□□□□□ -0.64
CDH11-201ENST00000268603 C7orf71A4D174 169 aa11.05□□□□□ -0.64
CDH11-201ENST00000268603 HOXA3O43365 443 aaPredicted RBP11.05□□□□□ -0.64
CDH11-201ENST00000268603 NTN1O95631 604 aa11.05□□□□□ -0.64
CDH11-201ENST00000268603 CTLA4P16410 223 aa11.05□□□□□ -0.64
CDH11-201ENST00000268603 FAM216AQ8WUB2 273 aa11.05□□□□□ -0.64
CDH11-201ENST00000268603 PLA2G2FQ9BZM2 168 aa11.05□□□□□ -0.64
CDH11-201ENST00000268603 LAMB4A4D0S4 1761 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 TRAV21A0A0B4J279 112 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 K7N7A8 449 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 S1PR2O95136 353 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 ZNF506Q5JVG8 444 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 PSMG3Q9BT73 122 aaPredicted RBP11.04□□□□□ -0.64
CDH11-201ENST00000268603 CDCA4Q9BXL8 241 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 CXCL16Q9H2A7 254 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 HSPB7Q9UBY9 170 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 CDC42EP3Q9UKI2 254 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 VSIG10L2P0DP72 767 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 CCL4P13236 92 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 ISL1P61371 349 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 GAPTQ8N292 157 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 PHLDA1Q8WV24 401 aaPredicted RBP11.04□□□□□ -0.64
CDH11-201ENST00000268603 SMIM4Q8WVI0 70 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 SLC35E3Q7Z769 313 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 FGF11Q92914 225 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 GALNT14Q96FL9 552 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 CHD4Q14839 1912 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 MYO18AQ92614 2054 aaKnown RBP11.04□□□□□ -0.64
CDH11-201ENST00000268603 CEACAM18A8MTB9 384 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 HBZP02008 142 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 RPL27AP46776 148 aaKnown RBP11.04□□□□□ -0.64
CDH11-201ENST00000268603 KLF9Q13886 244 aaPredicted RBP11.04□□□□□ -0.64
CDH11-201ENST00000268603 MRGPRFQ96AM1 343 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 MMP9P14780 707 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 PRELID3AQ96N28 172 aa11.04□□□□□ -0.64
CDH11-201ENST00000268603 MYH9P35579 1960 aaKnown RBP11.03□□□□□ -0.64
CDH11-201ENST00000268603 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.03□□□□□ -0.64
CDH11-201ENST00000268603 A0A0A6YYD5 115 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 SLC25A17O43808 307 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 SELENOPP49908 381 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 NRN1LQ496H8 165 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 OR8B12Q8NGG6 310 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 CNRIP1Q96F85 164 aaPredicted RBP11.03□□□□□ -0.64
CDH11-201ENST00000268603 IGHV1OR15-9A0A0B4J2B8 117 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 GP1BAP07359 652 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 RSPO2Q6UXX9 243 aaPredicted RBP11.03□□□□□ -0.64
CDH11-201ENST00000268603 GVQW1Q8N7I0 195 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 ALG14Q96F25 216 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 PLPP3O14495 311 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 OTX1P32242 354 aaPredicted RBP11.03□□□□□ -0.64
CDH11-201ENST00000268603 SSTR5P35346 364 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 DUX3Q96PT4 197 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 MYH4Q9Y623 1939 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 SLC25A20O43772 301 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 FAM159AQ6UWV7 190 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 IGLV3-10A0A075B6K4 115 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 TRBV7-9A0A0J9YWB2 115 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 DCAF12L2Q5VW00 463 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 SCNM1Q9BWG6 230 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 MAP1LC3AQ9H492 121 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 CCL28Q9NRJ3 127 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 NDUFB6O95139 128 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 DLEU7Q6UYE1 221 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 RNF133Q8WVZ7 376 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 DNASE2BQ8WZ79 361 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 JKAMPQ9P055 326 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 TNFRSF18Q9Y5U5 241 aa11.03□□□□□ -0.64
CDH11-201ENST00000268603 TMEM229AB2RXF0 380 aa11.02□□□□□ -0.64
CDH11-201ENST00000268603 C21orf140B9A014 251 aa11.02□□□□□ -0.64
CDH11-201ENST00000268603 ETHE1O95571 254 aa11.02□□□□□ -0.64
CDH11-201ENST00000268603 CDS2O95674 445 aa11.02□□□□□ -0.64
CDH11-201ENST00000268603 ZNF688P0C7X2 276 aa11.02□□□□□ -0.64
CDH11-201ENST00000268603 NAT1P18440 290 aa11.02□□□□□ -0.64
CDH11-201ENST00000268603 OR6X1Q8NH79 312 aa11.02□□□□□ -0.64
CDH11-201ENST00000268603 LSM10Q969L4 123 aaKnown RBP11.02□□□□□ -0.64
CDH11-201ENST00000268603 PROB1E7EW31 1015 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 MPC2O95563 127 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 PCSK4Q6UW60 755 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 NFAM1Q8NET5 270 aaPredicted RBP11.02□□□□□ -0.65
CDH11-201ENST00000268603 PGLYRP4Q96LB8 373 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 SLC52A3Q9NQ40 469 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 IGKV3D-20A0A0C4DH25 116 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 CEACAM4O75871 244 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 HIST1H1AQ02539 215 aaPredicted RBP11.02□□□□□ -0.65
CDH11-201ENST00000268603 DHRS2Q13268 280 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 RNF122Q9H9V4 155 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 SIRT7Q9NRC8 400 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 GZMKP49863 264 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 YIPF6Q96EC8 236 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 WIPI2Q9Y4P8 454 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 TRGV2A0A075B6R0 118 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 PNLIPP16233 465 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 ST3GAL2Q16842 350 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 C10orf128Q5T292 105 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 AMER3Q8N944 861 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 OR10AC1Q8NH08 325 aa11.02□□□□□ -0.65
CDH11-201ENST00000268603 RBMY1BA6NDE4 496 aaKnown RBP11.01□□□□□ -0.65
CDH11-201ENST00000268603 RBMY1EA6NEQ0 496 aaKnown RBP11.01□□□□□ -0.65
CDH11-201ENST00000268603 CELA2BP08218 269 aaPredicted RBP11.01□□□□□ -0.65
CDH11-201ENST00000268603 RBMY1DP0C7P1 496 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms