RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 OR6C3Q9NZP0 311 aa13.6□□□□□ -0.23
TPM1-201ENST00000267996 BOLA1Q9Y3E2 137 aa13.6□□□□□ -0.23
TPM1-201ENST00000267996 DSCAML1Q8TD84 2053 aa13.6□□□□□ -0.23
TPM1-201ENST00000267996 NKX6-3A6NJ46 265 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 SPINT2O43291 252 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 FSTL3O95633 263 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 DANCRP0C864 163 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 SSTR5P35346 364 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 GLYATL2Q8WU03 294 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 MSI2Q96DH6 328 aaKnown RBP13.59□□□□□ -0.23
TPM1-201ENST00000267996 PLSCR3Q9NRY6 295 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 A0A1W2PPR1 153 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 HSD17B6O14756 317 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 ADAP1O75689 374 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 IGLV2-14P01704 120 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 SP6Q3SY56 376 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 GSG1LQ6UXU4 331 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 LIAT1Q6ZQX7 453 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 TBC1D26Q86UD7 250 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 CMTM1Q8IZ96 169 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 OR52L2PQ8NGH6 319 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 SEC22AQ96IW7 307 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 AKR1E2Q96JD6 320 aa13.59□□□□□ -0.23
TPM1-201ENST00000267996 VRK1Q99986 396 aaPredicted RBP13.59□□□□□ -0.23
TPM1-201ENST00000267996 TRAV14DV4A0A0A6YYC5 116 aa13.58□□□□□ -0.24
TPM1-201ENST00000267996 C3orf85A0A1B0GTC6 90 aa13.58□□□□□ -0.24
TPM1-201ENST00000267996 F2RL2O00254 374 aa13.58□□□□□ -0.24
TPM1-201ENST00000267996 PGLYRP1O75594 196 aaPredicted RBP13.58□□□□□ -0.24
TPM1-201ENST00000267996 C1QL1O75973 258 aa13.58□□□□□ -0.24
TPM1-201ENST00000267996 EDDM3BP56851 147 aa13.58□□□□□ -0.24
TPM1-201ENST00000267996 GNMTQ14749 295 aa13.58□□□□□ -0.24
TPM1-201ENST00000267996 HFEQ30201 348 aa13.58□□□□□ -0.24
TPM1-201ENST00000267996 CORO2AQ92828 525 aa13.58□□□□□ -0.24
TPM1-201ENST00000267996 TP53RKQ96S44 253 aa13.58□□□□□ -0.24
TPM1-201ENST00000267996 NMES1Q9C002 83 aa13.58□□□□□ -0.24
TPM1-201ENST00000267996 KAAG1Q9UBP8 84 aa13.58□□□□□ -0.24
TPM1-201ENST00000267996 C5orf51A6NDU8 294 aa13.57□□□□□ -0.24
TPM1-201ENST00000267996 HMSDA8MTL9 139 aa13.57□□□□□ -0.24
TPM1-201ENST00000267996 TMPRSS2O15393 492 aa13.57□□□□□ -0.24
TPM1-201ENST00000267996 SOD3P08294 240 aa13.57□□□□□ -0.24
TPM1-201ENST00000267996 OR8U9P0C7N5 309 aa13.57□□□□□ -0.24
TPM1-201ENST00000267996 CYCSP99999 105 aaKnown RBP13.57□□□□□ -0.24
TPM1-201ENST00000267996 MSMO1Q15800 293 aa13.57□□□□□ -0.24
TPM1-201ENST00000267996 OR8U1Q8NH10 309 aa13.57□□□□□ -0.24
TPM1-201ENST00000267996 GRPEL2Q8TAA5 225 aa13.57□□□□□ -0.24
TPM1-201ENST00000267996 RFESDQ8TAC1 157 aa13.57□□□□□ -0.24
TPM1-201ENST00000267996 C18orf12Q96KH6 178 aa13.57□□□□□ -0.24
TPM1-201ENST00000267996 PDCD10Q9BUL8 212 aa13.57□□□□□ -0.24
TPM1-201ENST00000267996 TMEM222Q9H0R3 208 aa13.57□□□□□ -0.24
TPM1-201ENST00000267996 RAB1BQ9H0U4 201 aa13.57□□□□□ -0.24
TPM1-201ENST00000267996 LINC00574Q9H8X3 128 aa13.57□□□□□ -0.24
TPM1-201ENST00000267996 OR2S2Q9NQN1 319 aa13.57□□□□□ -0.24
TPM1-201ENST00000267996 HSPB11Q9Y547 144 aa13.57□□□□□ -0.24
TPM1-201ENST00000267996 DOPEY1Q5JWR5 2465 aa13.57□□□□□ -0.24
TPM1-201ENST00000267996 MPTX1A8MV57 137 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 FAM25EA8MYX2 175 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 PHF1O43189 567 aaPredicted RBP13.56□□□□□ -0.24
TPM1-201ENST00000267996 NDUFA2O43678 99 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 FCN3O75636 299 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 RP2O75695 350 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 HOXB5P09067 269 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 COL8A2P25067 703 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 SRPXP78539 464 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 IFITM2Q01629 132 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 FGL1Q08830 312 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 IL15RAQ13261 267 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 C17orf58Q2M2W7 97 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 LGALSLQ3ZCW2 172 aaPredicted RBP13.56□□□□□ -0.24
TPM1-201ENST00000267996 FAM53AQ6NSI3 398 aaPredicted RBP13.56□□□□□ -0.24
TPM1-201ENST00000267996 TCF23Q7RTU1 214 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 LGI3Q8N145 548 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 ZBTB8BQ8NAP8 495 aaPredicted RBP13.56□□□□□ -0.24
TPM1-201ENST00000267996 FAM216AQ8WUB2 273 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 TMEM56Q96MV1 263 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 METTL8Q9H825 291 aaKnown RBP13.56□□□□□ -0.24
TPM1-201ENST00000267996 RAB9BQ9NP90 201 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 CALYQ9NYX4 217 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 JPT1Q9UK76 154 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 TMEM56-RWDD3S4R434 201 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 KBTBD11-OT1A0A1B0GTJ5 212 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 C13orf42A0A1B0GVH6 325 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 H0Y980 276 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 B3GALNT1O75752 331 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 SNAPC5O75971 98 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 UCP1P25874 307 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 S100GP29377 79 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 PPP1CCP36873 323 aaKnown RBP13.56□□□□□ -0.24
TPM1-201ENST00000267996 LOXL3P58215 753 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 MRPS11P82912 194 aaKnown RBP13.56□□□□□ -0.24
TPM1-201ENST00000267996 ZBTB34Q8NCN2 500 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 LHFPL5Q8TAF8 219 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 PPP1R1CQ8WVI7 109 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 NINJ1Q92982 152 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 OR10C1Q96KK4 312 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 C2orf50Q96LR7 162 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 TMEM246Q9BRR3 403 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 SLC25A10Q9UBX3 287 aaPredicted RBP13.56□□□□□ -0.24
TPM1-201ENST00000267996 CLN8Q9UBY8 286 aa13.56□□□□□ -0.24
TPM1-201ENST00000267996 HRNRQ86YZ3 2850 aaPredicted RBP13.55□□□□□ -0.24
TPM1-201ENST00000267996 TRGV10A0A0A0MS01 117 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms