RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 DNM1P46Q6ZS02 220 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 OR2Z1Q8NG97 314 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 OR8B2Q96RD0 313 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 MRPL18Q9H0U6 180 aaKnown RBP4.8□□□□□ -1.64
XRN1-201ENST00000264951 CNTD2Q9H8S5 307 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 MSL2Q9HCI7 577 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 MRPS18AQ9NVS2 196 aaKnown RBP4.8□□□□□ -1.64
XRN1-201ENST00000264951 MED29Q9NX70 200 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 ZNF815PA8K554 130 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 HOXA5P20719 270 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 SMAD2Q15796 467 aaKnown RBP4.8□□□□□ -1.64
XRN1-201ENST00000264951 MEIG1Q5JSS6 88 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 GCSAMQ8N6F7 178 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 ZNF441Q8N8Z8 693 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 MFRPQ9BY79 579 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 TMEM222Q9H0R3 208 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 MS4A5Q9H3V2 200 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 PTP4A3O75365 173 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 MGPP08493 103 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 FBXO46Q6PJ61 603 aaPredicted RBP4.8□□□□□ -1.64
XRN1-201ENST00000264951 WFDC8Q8IUA0 241 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 TP53INP2Q8IXH6 220 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 DDB2Q92466 427 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 HHIPQ96QV1 700 aa4.8□□□□□ -1.64
XRN1-201ENST00000264951 ZNF430Q9H8G1 570 aaPredicted RBP4.8□□□□□ -1.64
XRN1-201ENST00000264951 MON2Q7Z3U7 1717 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 A0A0U1RQV5 110 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 LOC390937A0A1W2PQ73 354 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 TCRBV5S1A1TA0A578 114 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 SRSF4Q08170 494 aaKnown RBP4.79□□□□□ -1.64
XRN1-201ENST00000264951 GAGE2BQ13066 116 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 TNXAQ16473 311 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 GUCA2BQ16661 112 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 GAGE2EQ4V326 116 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 OR9G4Q8NGQ1 327 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 OR1K1Q8NGR3 316 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 SPACA5Q96QH8 159 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 SDHCQ99643 169 aaPredicted RBP4.79□□□□□ -1.64
XRN1-201ENST00000264951 SPAG8Q99932 426 aaPredicted RBP4.79□□□□□ -1.64
XRN1-201ENST00000264951 DNAJB12Q9NXW2 375 aaKnown RBP4.79□□□□□ -1.64
XRN1-201ENST00000264951 GAGE2DQ9UEU5 116 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 CARHSP1Q9Y2V2 147 aaKnown RBP4.79□□□□□ -1.64
XRN1-201ENST00000264951 NCOR1O75376 2440 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 PCBP3P57721 371 aaKnown RBP4.79□□□□□ -1.64
XRN1-201ENST00000264951 TNFAIP6P98066 277 aaPredicted RBP4.79□□□□□ -1.64
XRN1-201ENST00000264951 ZNF880Q6PDB4 577 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 ALKAL1Q6UXT8 129 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 ANKRD33Q7Z3H0 272 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 DEFB132Q7Z7B7 95 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 SPEM1Q8N4L4 309 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 DEFB108BQ8NET1 73 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 ZNF775Q96BV0 537 aaPredicted RBP4.79□□□□□ -1.64
XRN1-201ENST00000264951 TMEM101Q96IK0 257 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 HARBI1Q96MB7 349 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 ZNF257Q9Y2Q1 563 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 FMN2Q9NZ56 1722 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 LMO7DNF2Z398 122 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 J3QR06 171 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 EML2O95834 649 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 ZNF146Q15072 292 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 MDP1Q86V88 176 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 CRISPLD2Q9H0B8 497 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 NUP188Q5SRE5 1749 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 PUSL1Q8N0Z8 303 aaKnown RBP4.79□□□□□ -1.64
XRN1-201ENST00000264951 DYNLRB2Q8TF09 96 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 RAX2Q96IS3 184 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 V9GYH0 126 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 FER1L4A9Z1Z3 1794 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 FER1L6Q2WGJ9 1857 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 TRAV39A0A0B4J263 110 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 CA1P00915 261 aaPredicted RBP4.79□□□□□ -1.64
XRN1-201ENST00000264951 TMEM249Q2WGJ8 235 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 HIKESHIQ53FT3 197 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 TM4SF19Q96DZ7 209 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 MS4A6AQ9H2W1 248 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 TMEM140Q9NV12 185 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 COA4Q9NYJ1 87 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 ONECUT1Q9UBC0 465 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 DHCR7Q9UBM7 475 aaKnown RBP4.79□□□□□ -1.64
XRN1-201ENST00000264951 TRIP11Q15643 1979 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 KNDC1Q76NI1 1749 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 SPNP16150 400 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 GUCA2AQ02747 115 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 ERV3-1Q14264 604 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 ZNF841Q6ZN19 808 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 LRRC29Q8WV35 223 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 ELSPBP1Q96BH3 223 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 MS4A3Q96HJ5 214 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 G6PC2Q9NQR9 355 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 ZNF600Q6ZNG1 722 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 VKORC1L1Q8N0U8 176 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 CIARTQ8N365 385 aaPredicted RBP4.79□□□□□ -1.64
XRN1-201ENST00000264951 ST20Q9HBF5 79 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 ZFP64Q9NPA5 681 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 DLL1O00548 723 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 FTH1P19P0C7X4 201 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 ZNF77Q15935 545 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 OPN3Q9H1Y3 402 aaPredicted RBP4.79□□□□□ -1.64
XRN1-201ENST00000264951 DNAJC4Q9NNZ3 241 aa4.79□□□□□ -1.64
XRN1-201ENST00000264951 ASCL3Q9NQ33 180 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms