RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 GYPAP02724 150 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 ATXN8OSP0DMR3 200 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 TMEM11P17152 192 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 GUCA1AP43080 201 aaPredicted RBP11.26□□□□□ -0.61
NUP54-201ENST00000264883 FBXW4P57775 412 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 NXPH1P58417 271 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 ID3Q02535 119 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 PLPPR5Q32ZL2 321 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 FAM78BQ5VT40 261 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 SMIM15Q7Z3B0 74 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 KMT5CQ86Y97 462 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 SELENOHQ8IZQ5 122 aaKnown RBP11.26□□□□□ -0.61
NUP54-201ENST00000264883 MRGPRDQ8TDS7 321 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 SIGLEC12Q96PQ1 595 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 HSPB9Q9BQS6 159 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 PLSCR2Q9NRY7 297 aa11.26□□□□□ -0.61
NUP54-201ENST00000264883 ADAMTS9Q9P2N4 1935 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 DUXBA0A1W2PPF3 345 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 RER1O15258 196 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 AADACP22760 399 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 MDH2P40926 338 aaKnown RBP11.25□□□□□ -0.61
NUP54-201ENST00000264883 NPBWR2P48146 333 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 PLXDC1Q8IUK5 500 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 GJC3Q8NFK1 279 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 PLPPR1Q8TBJ4 325 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 SPSB1Q96BD6 273 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 TMEM56Q96MV1 263 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 NUDT22Q9BRQ3 303 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 ZNF160Q9HCG1 818 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 PLA2G3Q9NZ20 509 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 PTRH2Q9Y3E5 179 aaKnown RBP11.25□□□□□ -0.61
NUP54-201ENST00000264883 TMEM56-RWDD3S4R434 201 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 USP34Q70CQ2 3546 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 PAX9P55771 341 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 TLE1Q04724 770 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 ACSF3Q4G176 576 aaPredicted RBP11.25□□□□□ -0.61
NUP54-201ENST00000264883 OR8G2PQ6IF36 304 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 DYRK2Q92630 601 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 PIGTQ969N2 578 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 PATZ1Q9HBE1 687 aaKnown RBP11.25□□□□□ -0.61
NUP54-201ENST00000264883 LAMA1P25391 3075 aa11.25□□□□□ -0.61
NUP54-201ENST00000264883 EXPH5Q8NEV8 1989 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 TMEM250H0YL14 139 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 H3BP45 60 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 CDAP32320 146 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 TMEM267Q0VDI3 215 aaPredicted RBP11.24□□□□□ -0.61
NUP54-201ENST00000264883 MRPL30Q8TCC3 161 aaKnown RBP11.24□□□□□ -0.61
NUP54-201ENST00000264883 LHX4Q969G2 390 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 PSMG3Q9BT73 122 aaPredicted RBP11.24□□□□□ -0.61
NUP54-201ENST00000264883 REPIN1Q9BWE0 567 aaKnown RBP11.24□□□□□ -0.61
NUP54-201ENST00000264883 ZNF552Q9H707 407 aaPredicted RBP11.24□□□□□ -0.61
NUP54-201ENST00000264883 KLRF1Q9NZS2 232 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 WIPI2Q9Y4P8 454 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 LOC105371242A0A075B767 164 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 GRIFINA4D1Z8 144 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 CBY3A6NI87 242 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 TOMM40O96008 361 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 MSR1P21757 451 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 EPHA8P29322 1005 aaPredicted RBP11.24□□□□□ -0.61
NUP54-201ENST00000264883 TESK1Q15569 626 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 TBC1D26Q86UD7 250 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 ZNF709Q8N972 641 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 OR4B1Q8NGF8 309 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 BTF3L4Q96K17 158 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 LYZL4Q96KX0 146 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 SLC45A2Q9UMX9 530 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 KIAA2026Q5HYC2 2103 aa11.24□□□□□ -0.61
NUP54-201ENST00000264883 CLEC18AA5D8T8 446 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 AQP7P3A6NL99 342 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 LMO7DNF2Z398 122 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 SYNGR4O95473 234 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 PPBPP02775 128 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 ADMP35318 185 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 PSMB3P49720 205 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 PPP1CBP62140 327 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 C10orf128Q5T292 105 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 FOXL2NBQ6ZUU3 175 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 CLEC18CQ8NCF0 446 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 NFAM1Q8NET5 270 aaPredicted RBP11.23□□□□□ -0.61
NUP54-201ENST00000264883 OR5T1Q8NG75 326 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 LAMTOR2Q9Y2Q5 125 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 MUC3AQ02505 3323 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 E9PLN8 166 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 GALR2O43603 387 aaPredicted RBP11.23□□□□□ -0.61
NUP54-201ENST00000264883 DUX1O43812 170 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 EFNA2O43921 213 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 SERF2P84101 59 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 MFAP5Q13361 173 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 OR8B8Q15620 311 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 CACNA1EQ15878 2313 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 NMSQ5H8A3 153 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 C20orf196Q8IYI0 205 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 GCNT2Q8N0V5 402 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 OR5AU1Q8NGC0 362 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 OR4F5Q8NH21 305 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 NAT6Q93015 286 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 OR4F4Q96R69 305 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 TUBG2Q9NRH3 451 aa11.23□□□□□ -0.61
NUP54-201ENST00000264883 SLC39A9Q9NUM3 307 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms