RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 IGHV2-70DA0A0C4DH43 119 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 STAG3L2P0CL84 134 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 DUSP1P28562 367 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 OTX1P32242 354 aaPredicted RBP7.3□□□□□ -1.24
LDB3-201ENST00000263066 RPS11P62280 158 aaKnown RBP eCLIP7.3□□□□□ -1.24
LDB3-201ENST00000263066 OR10P1Q8NGE3 313 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 OR1L3Q8NH93 324 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 DAZLQ92904 295 aaKnown RBP7.3□□□□□ -1.24
LDB3-201ENST00000263066 TM4SF18Q96CE8 201 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 GFI1Q99684 422 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 ZNF286AQ9HBT8 521 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 THYN1Q9P016 225 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 ZNF407Q9C0G0 2248 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 SMG1Q96Q15 3661 aaKnown RBP7.3□□□□□ -1.24
LDB3-201ENST00000263066 SCN8AQ9UQD0 1980 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 LOC105371242A0A075B767 164 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 NPIPB7O75200 414 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 SERF1AO75920 110 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 TMEM225BP0DP42 221 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 ZNF93P35789 620 aaPredicted RBP7.3□□□□□ -1.24
LDB3-201ENST00000263066 RELBQ01201 579 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 SHBQ15464 509 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 TSPO2Q5TGU0 170 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 RAET1LQ5VY80 246 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 SHISA5Q8N114 240 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 PAQR4Q8N4S7 273 aaPredicted RBP7.3□□□□□ -1.24
LDB3-201ENST00000263066 CISD2Q8N5K1 135 aaKnown RBP7.3□□□□□ -1.24
LDB3-201ENST00000263066 OR2C3Q8N628 320 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 SGMS2Q8NHU3 365 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 ZNF319Q9P2F9 582 aa7.3□□□□□ -1.24
LDB3-201ENST00000263066 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.3□□□□□ -1.24
LDB3-201ENST00000263066 A0A1W2PR48 441 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 DPRXA6NFQ7 191 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 SLC16A7O60669 478 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 ZNF737O75373 536 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 NEURL1O76050 574 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 ZNF205O95201 554 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 AZU1P20160 251 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 TAS2R46P59540 309 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 DUSP2Q05923 314 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 ICAM4Q14773 271 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 ABHD17CQ6PCB6 329 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 OR2L13Q8N349 312 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 FGGYQ96C11 551 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 MRPS28Q9Y2Q9 187 aaKnown RBP7.29□□□□□ -1.24
LDB3-201ENST00000263066 DENND4CQ5VZ89 1909 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 LRRC3CA6NJW4 275 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 DEDDO75618 318 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 BCL2P10415 239 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 RPS4Y1P22090 263 aaKnown RBP7.29□□□□□ -1.24
LDB3-201ENST00000263066 PIGPP57054 158 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 PMP22Q01453 160 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 ZIC1Q15915 447 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 TMEM95Q3KNT9 176 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 TMEM225Q6GV28 225 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 BAHD1Q8TBE0 780 aaPredicted RBP7.29□□□□□ -1.24
LDB3-201ENST00000263066 TMEM59Q9BXS4 323 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 SS18L2Q9UHA2 77 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 KCNS2Q9ULS6 477 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 EMC9Q9Y3B6 208 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 MRPS18BQ9Y676 258 aaKnown RBP7.29□□□□□ -1.24
LDB3-201ENST00000263066 DOCK4Q8N1I0 1966 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 BMPR1BO00238 502 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 FTH1P19P0C7X4 201 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 ZNF16P17020 682 aaPredicted RBP7.29□□□□□ -1.24
LDB3-201ENST00000263066 ZNF43P17038 809 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 RUNX2Q13950 521 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 HLA-DRB5Q30154 266 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 C9orf135Q5VTT2 229 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 ASPHD2Q6ICH7 369 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 SLC18B1Q6NT16 456 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 TCF23Q7RTU1 214 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 LMF2Q9BU23 707 aaKnown RBP7.29□□□□□ -1.24
LDB3-201ENST00000263066 PEF1Q9UBV8 284 aaKnown RBP7.29□□□□□ -1.24
LDB3-201ENST00000263066 ANAPC1Q9H1A4 1944 aa7.29□□□□□ -1.24
LDB3-201ENST00000263066 FIGNL2A6NMB9 653 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 ISLRO14498 428 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 NUDT21O43809 227 aaKnown RBP7.28□□□□□ -1.24
LDB3-201ENST00000263066 CLEC3AO75596 197 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 ESDP10768 282 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 BLVRBP30043 206 aaPredicted RBP7.28□□□□□ -1.24
LDB3-201ENST00000263066 APOBEC1P41238 236 aaKnown RBP7.28□□□□□ -1.24
LDB3-201ENST00000263066 IER3P46695 156 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 ZNF83P51522 516 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 ARF6P62330 175 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 EWSR1Q01844 656 aaKnown RBP eCLIP7.28□□□□□ -1.24
LDB3-201ENST00000263066 ESPL1Q14674 2120 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 LTC4SQ16873 150 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 KIAA1644Q3SXP7 199 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 MPV17L2Q567V2 206 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 FAM57BQ71RH2 274 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 BOD1L2Q8IYS8 172 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 POC1AQ8NBT0 407 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 SPIN2AQ99865 258 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 SPIN2BQ9BPZ2 258 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 C19orf25Q9UFG5 118 aaPredicted RBP7.28□□□□□ -1.24
LDB3-201ENST00000263066 TBL2Q9Y4P3 447 aaKnown RBP7.28□□□□□ -1.24
LDB3-201ENST00000263066 A0A1W2PQM1 296 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 P2RY10O00398 339 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 HYPMO75409 117 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms