RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 UBE2L6O14933 153 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 ZNF205O95201 554 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 CCR6P51684 374 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 RND3P61587 244 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 TMEM267Q0VDI3 215 aaPredicted RBP7.1□□□□□ -1.27
PTPN3-201ENST00000262539 MRGPRGQ86SM5 289 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 GLCCI1Q86VQ1 547 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 UBALD1Q8TB05 177 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 SLC25A28Q96A46 364 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 BTF3L4Q96K17 158 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 SLC25A22Q9H936 323 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 SAP30LQ9HAJ7 183 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 GAR1Q9NY12 217 aaKnown RBP7.1□□□□□ -1.27
PTPN3-201ENST00000262539 ANAPC10Q9UM13 185 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 UFC1Q9Y3C8 167 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 ADRA2AP08913 450 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 CNN1P51911 297 aaKnown RBP7.1□□□□□ -1.27
PTPN3-201ENST00000262539 TMEM268Q5VZI3 342 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 TGIF2LXQ8IUE1 241 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 GNPNAT1Q96EK6 184 aaPredicted RBP7.1□□□□□ -1.27
PTPN3-201ENST00000262539 MARS2Q96GW9 593 aaKnown RBP7.1□□□□□ -1.27
PTPN3-201ENST00000262539 ALPK3Q96L96 1907 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 E5RGE8 158 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 FCGR3BO75015 233 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 CEACAM6P40199 344 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 RSPO4Q2I0M5 234 aaPredicted RBP7.1□□□□□ -1.27
PTPN3-201ENST00000262539 NR2C2APQ86WQ0 139 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 NSG2Q9Y328 171 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 A0A1B0GTH9 108 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 CCSO14618 274 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 GATCO43716 136 aaKnown RBP7.1□□□□□ -1.27
PTPN3-201ENST00000262539 SMPD2O60906 423 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 SLC25A5P05141 298 aaKnown RBP7.1□□□□□ -1.27
PTPN3-201ENST00000262539 FCGR2CP31995 323 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 GLRXP35754 106 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 FAM3AP98173 230 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 TAGLNQ01995 201 aaKnown RBP7.1□□□□□ -1.27
PTPN3-201ENST00000262539 SLX1AQ9BQ83 275 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 NIPSNAP3BQ9BS92 247 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 MS4A5Q9H3V2 200 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 PROK2Q9HC23 129 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 CEP250Q9BV73 2442 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 DHRS7BQ6IAN0 325 aaPredicted RBP7.1□□□□□ -1.27
PTPN3-201ENST00000262539 PRSS54Q6PEW0 395 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 TAF9BQ9HBM6 251 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 PLSCR4Q9NRQ2 329 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 A0A0A6YYJ9 748 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 H7BYZ3 331 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 INPP5JQ15735 1006 aaPredicted RBP7.1□□□□□ -1.27
PTPN3-201ENST00000262539 ACSF3Q4G176 576 aaPredicted RBP7.1□□□□□ -1.27
PTPN3-201ENST00000262539 CHRDL1Q9BU40 450 aa7.1□□□□□ -1.27
PTPN3-201ENST00000262539 PRR32B1ATL7 298 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 GAPDHP04406 335 aaKnown RBP7.09□□□□□ -1.27
PTPN3-201ENST00000262539 RAB7AP51149 207 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 WDR61Q9GZS3 305 aaKnown RBP7.09□□□□□ -1.27
PTPN3-201ENST00000262539 UBE2L5PA0A1B0GUS4 154 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 CD8AP01732 235 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 MGPP08493 103 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 RFPL3SP0C7P2 107 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 SLC35B1P78383 322 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 OR10K2Q6IF99 312 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 PRSS45Q7RTY3 260 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 OR1B1Q8NGR6 318 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 ARHGAP5-AS1Q96IT6 56 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 DOK5Q9P104 306 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 PSG11Q9UQ72 335 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 MRPS18BQ9Y676 258 aaKnown RBP7.09□□□□□ -1.27
PTPN3-201ENST00000262539 PYCARD-AS1I3L0S3 204 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 ID1P41134 155 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 TFPI2P48307 235 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 SRSF4Q08170 494 aaKnown RBP7.09□□□□□ -1.27
PTPN3-201ENST00000262539 INSL4Q14641 139 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 HMGN3Q15651 99 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 MIDNQ504T8 468 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 LCN15Q6UWW0 184 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 LYPD6Q86Y78 171 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 TUBA4BQ9H853 241 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 OR6C3Q9NZP0 311 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 FAM90A26D6RGX4 464 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 HRH1P35367 487 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 SPINK9Q5DT21 86 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 ASCL5Q7RTU5 278 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 LRTM2Q8N967 370 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 RNF141Q8WVD5 230 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 TMUB1Q9BVT8 246 aa7.09□□□□□ -1.27
PTPN3-201ENST00000262539 MGST3O14880 152 aa7.09□□□□□ -1.28
PTPN3-201ENST00000262539 NGFP01138 241 aa7.09□□□□□ -1.28
PTPN3-201ENST00000262539 COX5AP20674 150 aa7.09□□□□□ -1.28
PTPN3-201ENST00000262539 KIR2DS2P43631 304 aa7.09□□□□□ -1.28
PTPN3-201ENST00000262539 GPR6P46095 362 aaPredicted RBP7.09□□□□□ -1.28
PTPN3-201ENST00000262539 PDCD1Q15116 288 aa7.09□□□□□ -1.28
PTPN3-201ENST00000262539 GPR137Q96N19 417 aa7.09□□□□□ -1.28
PTPN3-201ENST00000262539 PNRC2Q9NPJ4 139 aaKnown RBP7.09□□□□□ -1.28
PTPN3-201ENST00000262539 STARD10Q9Y365 291 aa7.09□□□□□ -1.28
PTPN3-201ENST00000262539 UMAD1C9J7I0 102 aa7.08□□□□□ -1.28
PTPN3-201ENST00000262539 NKX2-8O15522 239 aa7.08□□□□□ -1.28
PTPN3-201ENST00000262539 Q0VFX4 171 aa7.08□□□□□ -1.28
PTPN3-201ENST00000262539 HAGHQ16775 308 aa7.08□□□□□ -1.28
PTPN3-201ENST00000262539 BAP18Q8IXM2 172 aa7.08□□□□□ -1.28
PTPN3-201ENST00000262539 OR8G5Q8NG78 346 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms