RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 NAPSAO96009 420 aa10.98□□□□□ -0.65
SGCA-201ENST00000262018 CD55P08174 381 aa10.98□□□□□ -0.65
SGCA-201ENST00000262018 S100A1P23297 94 aa10.98□□□□□ -0.65
SGCA-201ENST00000262018 CFHR2P36980 270 aa10.98□□□□□ -0.65
SGCA-201ENST00000262018 TAS2R31P59538 309 aa10.98□□□□□ -0.65
SGCA-201ENST00000262018 CCL8P80075 99 aa10.98□□□□□ -0.65
SGCA-201ENST00000262018 RBM39Q14498 530 aaKnown RBP10.98□□□□□ -0.65
SGCA-201ENST00000262018 KLF17Q5JT82 389 aaPredicted RBP10.98□□□□□ -0.65
SGCA-201ENST00000262018 FIP1L1Q6UN15 594 aaKnown RBP10.98□□□□□ -0.65
SGCA-201ENST00000262018 ZNF826PQ6ZT77 177 aa10.98□□□□□ -0.65
SGCA-201ENST00000262018 OR4F5Q8NH21 305 aa10.98□□□□□ -0.65
SGCA-201ENST00000262018 FAM110DQ8TAY7 271 aaPredicted RBP10.98□□□□□ -0.65
SGCA-201ENST00000262018 CAPSLQ8WWF8 208 aa10.98□□□□□ -0.65
SGCA-201ENST00000262018 MEGF10Q96KG7 1140 aa10.98□□□□□ -0.65
SGCA-201ENST00000262018 SEC22CQ9BRL7 303 aa10.98□□□□□ -0.65
SGCA-201ENST00000262018 ZNF436Q9C0F3 470 aaPredicted RBP10.98□□□□□ -0.65
SGCA-201ENST00000262018 RIMS4Q9H426 269 aaPredicted RBP10.98□□□□□ -0.65
SGCA-201ENST00000262018 SAP30LQ9HAJ7 183 aa10.98□□□□□ -0.65
SGCA-201ENST00000262018 ZNF286AQ9HBT8 521 aa10.98□□□□□ -0.65
SGCA-201ENST00000262018 DECR2Q9NUI1 292 aa10.98□□□□□ -0.65
SGCA-201ENST00000262018 EHFQ9NZC4 300 aa10.98□□□□□ -0.65
SGCA-201ENST00000262018 IGHV3-64DA0A0J9YX35 117 aa10.97□□□□□ -0.65
SGCA-201ENST00000262018 C3orf80F5H4A9 247 aa10.97□□□□□ -0.65
SGCA-201ENST00000262018 ARPC4P59998 168 aa10.97□□□□□ -0.65
SGCA-201ENST00000262018 TSPAN5P62079 268 aa10.97□□□□□ -0.65
SGCA-201ENST00000262018 TNFAIP6P98066 277 aaPredicted RBP10.97□□□□□ -0.65
SGCA-201ENST00000262018 BEAN1Q3B7T3 259 aa10.97□□□□□ -0.65
SGCA-201ENST00000262018 ACP7Q6ZNF0 438 aa10.97□□□□□ -0.65
SGCA-201ENST00000262018 SLC25A42Q86VD7 318 aa10.97□□□□□ -0.65
SGCA-201ENST00000262018 DPCDQ9BVM2 203 aaPredicted RBP10.97□□□□□ -0.65
SGCA-201ENST00000262018 MS4A7Q9GZW8 240 aaPredicted RBP10.97□□□□□ -0.65
SGCA-201ENST00000262018 NECAP2Q9NVZ3 263 aa10.97□□□□□ -0.65
SGCA-201ENST00000262018 C1orf123Q9NWV4 160 aa10.97□□□□□ -0.65
SGCA-201ENST00000262018 IL19Q9UHD0 177 aa10.97□□□□□ -0.65
SGCA-201ENST00000262018 ZNF222Q9UK12 451 aa10.97□□□□□ -0.65
SGCA-201ENST00000262018 SLC33A1O00400 549 aaPredicted RBP10.96□□□□□ -0.65
SGCA-201ENST00000262018 SDCBPO00560 298 aaPredicted RBP10.96□□□□□ -0.65
SGCA-201ENST00000262018 SH2D1BO14796 132 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 ATP6V1G1O75348 118 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 OR2A4O95047 310 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 OR2H2O95918 312 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 ZNF44P15621 663 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 TNFRSF1AP19438 455 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 MDH2P40926 338 aaKnown RBP10.96□□□□□ -0.65
SGCA-201ENST00000262018 GATA4P43694 442 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 KRTAP10-3P60369 221 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 GMFBP60983 142 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 ZNF660Q6AZW8 331 aaPredicted RBP10.96□□□□□ -0.65
SGCA-201ENST00000262018 ZNF880Q6PDB4 577 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 DEFB108BQ8NET1 73 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 OR11H7Q8NGC8 314 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 OR2A7Q96R45 310 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 TMEM246Q9BRR3 403 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 FN3KRPQ9HA64 309 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 SEBOXQ9HB31 216 aaPredicted RBP10.96□□□□□ -0.65
SGCA-201ENST00000262018 CHMP1AQ9HD42 196 aaPredicted RBP10.96□□□□□ -0.65
SGCA-201ENST00000262018 Q9N2K0 584 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 UFSP2Q9NUQ7 469 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 RASL12Q9NYN1 266 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 GLS2Q9UI32 602 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 GPR132Q9UNW8 380 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 WIPI2Q9Y4P8 454 aa10.96□□□□□ -0.65
SGCA-201ENST00000262018 FAM181BA6NEQ2 426 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 SRRM5B3KS81 715 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 G3V4G9 280 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 FABP7O15540 132 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 HAND1O96004 215 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 CRYBA1P05813 215 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 OR4E1P0C645 316 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 GLRA1P23415 457 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 LMO1P25800 156 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 FGL1Q08830 312 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 SURF2Q15527 256 aaPredicted RBP10.95□□□□□ -0.66
SGCA-201ENST00000262018 SMIM21Q3B7S5 101 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 PAN3Q58A45 887 aaKnown RBP10.95□□□□□ -0.66
SGCA-201ENST00000262018 AADACL3Q5VUY0 350 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 DHRS11Q6UWP2 260 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 TMED4Q7Z7H5 227 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 FAM90A1Q86YD7 464 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 OR52B4Q8NGK2 314 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 MRPL30Q8TCC3 161 aaKnown RBP10.95□□□□□ -0.66
SGCA-201ENST00000262018 MARCH1Q8TCQ1 289 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 MRAPQ8TCY5 172 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 NEK7Q8TDX7 302 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 ZNF431Q8TF32 576 aaPredicted RBP10.95□□□□□ -0.66
SGCA-201ENST00000262018 LRRC29Q8WV35 223 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 ITLN1Q8WWA0 313 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 DMRTB1Q96MA1 342 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 OR2V2Q96R30 315 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 WDR13Q9H1Z4 485 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 SOX21Q9Y651 276 aaPredicted RBP10.95□□□□□ -0.66
SGCA-201ENST00000262018 AUP1Q9Y679 476 aa10.95□□□□□ -0.66
SGCA-201ENST00000262018 IGHV1-69-2A0A0G2JMI3 117 aa10.94□□□□□ -0.66
SGCA-201ENST00000262018 hCG_1807616A0A1W2PRN6 198 aa10.94□□□□□ -0.66
SGCA-201ENST00000262018 CLPSL1A2RUU4 121 aa10.94□□□□□ -0.66
SGCA-201ENST00000262018 OR5H14A6NHG9 310 aa10.94□□□□□ -0.66
SGCA-201ENST00000262018 IFNL4K9M1U5 179 aa10.94□□□□□ -0.66
SGCA-201ENST00000262018 SIRPB1O00241 398 aa10.94□□□□□ -0.66
SGCA-201ENST00000262018 OR5H8P0DN80 308 aa10.94□□□□□ -0.66
SGCA-201ENST00000262018 DHODHQ02127 395 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms