RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 TMEM54Q969K7 222 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 NPFFR1Q9GZQ6 430 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 PEMTQ9UBM1 199 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 NEURL1O76050 574 aa11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 NDUFB6O95139 128 aa11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 TMEM78Q5T7P6 136 aa11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 ZNF645Q8N7E2 425 aa11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 MTFP1Q9UDX5 166 aa11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 A0A1W2PRX2 142 aa11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 MAP1LC3B2A6NCE7 125 aa11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 HIST1H1BP16401 226 aaKnown RBP11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 COMPP49747 757 aaPredicted RBP11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 MAP1LC3BQ9GZQ8 125 aa11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 TLNRD1Q9H1K6 362 aa11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 TRAV39A0A0B4J263 110 aa11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 LOC102723971A0A1B0GUV8 181 aa11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 FAM24AA6NFZ4 105 aa11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 SLC25A53Q5H9E4 307 aa11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 FAM122BQ7Z309 247 aa11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 COL11A1P12107 1806 aaPredicted RBP11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 FUCA1P04066 466 aa11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 FGF9P31371 208 aaPredicted RBP11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 C11orf87Q6NUJ2 197 aa11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 GLDNQ6ZMI3 551 aaPredicted RBP11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 DRAXINQ8NBI3 349 aaPredicted RBP11.72□□□□□ -0.53
PDGFRB-201ENST00000261799 TRIP12Q14669 1992 aaPredicted RBP11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 C19orf67A6NJJ6 358 aa11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 HYPMO75409 117 aa11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 LRRC75BQ2VPJ9 315 aa11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 TMEM97Q5BJF2 176 aa11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 TPRX1Q8N7U7 411 aa11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 SSC4DQ8WTU2 575 aa11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 ZDHHC11Q9H8X9 412 aa11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 ZNF586Q9NXT0 402 aa11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 KIF13BQ9NQT8 1826 aa11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 TRIM77I1YAP6 450 aa11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 ZNF737O75373 536 aa11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 MUC1P15941 1255 aaPredicted RBP11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 MMP16P51512 607 aa11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 AMMECR1LQ6DCA0 310 aa11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 TMEM56-RWDD3S4R434 201 aa11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 S1PR2O95136 353 aa11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 DMKNQ6E0U4 476 aaPredicted RBP11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 MMP24Q9Y5R2 645 aa11.71□□□□□ -0.53
PDGFRB-201ENST00000261799 GCSHP23434 173 aa11.71□□□□□ -0.54
PDGFRB-201ENST00000261799 PSG5Q15238 335 aa11.71□□□□□ -0.54
PDGFRB-201ENST00000261799 OR2C3Q8N628 320 aa11.71□□□□□ -0.54
PDGFRB-201ENST00000261799 OR4D11Q8NGI4 311 aa11.71□□□□□ -0.54
PDGFRB-201ENST00000261799 MANBALQ9NQG1 85 aa11.71□□□□□ -0.54
PDGFRB-201ENST00000261799 PDE4DIPQ5VU43 2346 aa11.71□□□□□ -0.54
PDGFRB-201ENST00000261799 SCN1AP35498 2009 aa11.71□□□□□ -0.54
PDGFRB-201ENST00000261799 NPIPB11E5RHQ5 1161 aa11.71□□□□□ -0.54
PDGFRB-201ENST00000261799 J3QKU1 62 aa11.71□□□□□ -0.54
PDGFRB-201ENST00000261799 ZNF708P17019 499 aa11.71□□□□□ -0.54
PDGFRB-201ENST00000261799 SPCS3P61009 180 aa11.71□□□□□ -0.54
PDGFRB-201ENST00000261799 IGLV3-21P80748 117 aaPredicted RBP11.71□□□□□ -0.54
PDGFRB-201ENST00000261799 TEPPQ6URK8 271 aa11.71□□□□□ -0.54
PDGFRB-201ENST00000261799 C20orf204Q6ZNR8 217 aa11.71□□□□□ -0.54
PDGFRB-201ENST00000261799 PGLYRP3Q96LB9 341 aa11.71□□□□□ -0.54
PDGFRB-201ENST00000261799 CST4P01036 141 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 THBDP07204 575 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 PPP1R1AQ13522 171 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 LGALSLQ3ZCW2 172 aaPredicted RBP11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 OR10Z1Q8NGY1 313 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 MBPP02686 304 aaPredicted RBP11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 PTTG1IPP53801 180 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 RPL8P62917 257 aaKnown RBP11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 DNM1P46Q6ZS02 220 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 COL4A1P02462 1669 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 PSG2P11465 335 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 RIGQ13278 110 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 SSX1Q16384 188 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 RNF212Q495C1 297 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 PRSS3P2Q8NHM4 247 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 MRPS18CQ9Y3D5 142 aaKnown RBP11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 PARP14Q460N5 1801 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 A0A0G2JLM5 398 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 P01737 135 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 TRGV3P03979 118 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 MEOX2P50222 304 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 DYNLT3P51808 116 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 FDX2Q6P4F2 183 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 ZNF705AQ6ZN79 300 aaPredicted RBP11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 ST6GALNAC2Q9UJ37 374 aa11.7□□□□□ -0.54
PDGFRB-201ENST00000261799 ODAMA1E959 279 aa11.69□□□□□ -0.54
PDGFRB-201ENST00000261799 CELA3AP09093 270 aa11.69□□□□□ -0.54
PDGFRB-201ENST00000261799 P2RY1P47900 373 aa11.69□□□□□ -0.54
PDGFRB-201ENST00000261799 OR4B1Q8NGF8 309 aa11.69□□□□□ -0.54
PDGFRB-201ENST00000261799 DYRK2Q92630 601 aa11.69□□□□□ -0.54
PDGFRB-201ENST00000261799 CRISP2P16562 243 aa11.69□□□□□ -0.54
PDGFRB-201ENST00000261799 G0S2P27469 103 aa11.69□□□□□ -0.54
PDGFRB-201ENST00000261799 HERVK_113P61574 105 aa11.69□□□□□ -0.54
PDGFRB-201ENST00000261799 C19orf54Q5BKX5 351 aa11.69□□□□□ -0.54
PDGFRB-201ENST00000261799 SEZ6L2Q6UXD5 910 aa11.69□□□□□ -0.54
PDGFRB-201ENST00000261799 GVQW1Q8N7I0 195 aa11.69□□□□□ -0.54
PDGFRB-201ENST00000261799 MEGF10Q96KG7 1140 aa11.69□□□□□ -0.54
PDGFRB-201ENST00000261799 PRSS22Q9GZN4 317 aa11.69□□□□□ -0.54
PDGFRB-201ENST00000261799 LOC285556D6RIA3 1793 aa11.69□□□□□ -0.54
PDGFRB-201ENST00000261799 FAM90A10PA6NDY2 464 aa11.69□□□□□ -0.54
PDGFRB-201ENST00000261799 FAM90A18PA6NE21 464 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms