RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 CXXC4Q9H2H0 198 aa14.84□□□□□ -0.03
SSB-201ENST00000260956 ZFP57Q9NU63 452 aa14.84□□□□□ -0.03
SSB-201ENST00000260956 LPAR3Q9UBY5 353 aa14.84□□□□□ -0.03
SSB-201ENST00000260956 FBN2P35556 2912 aa14.84□□□□□ -0.03
SSB-201ENST00000260956 RAB19A4D1S5 217 aa14.83□□□□□ -0.03
SSB-201ENST00000260956 PSPNO60542 156 aa14.83□□□□□ -0.03
SSB-201ENST00000260956 PGLYRP1O75594 196 aaPredicted RBP14.83□□□□□ -0.03
SSB-201ENST00000260956 NXPH2O95156 264 aa14.83□□□□□ -0.03
SSB-201ENST00000260956 PTBP3O95758 552 aaKnown RBP14.83□□□□□ -0.03
SSB-201ENST00000260956 COL8A1P27658 744 aa14.83□□□□□ -0.03
SSB-201ENST00000260956 P2RY1P47900 373 aa14.83□□□□□ -0.03
SSB-201ENST00000260956 SMCO1Q147U7 214 aa14.83□□□□□ -0.03
SSB-201ENST00000260956 WDR82Q6UXN9 313 aa14.83□□□□□ -0.03
SSB-201ENST00000260956 MEX3BQ6ZN04 569 aaKnown RBP14.83□□□□□ -0.03
SSB-201ENST00000260956 ABHD14BQ96IU4 210 aa14.83□□□□□ -0.03
SSB-201ENST00000260956 SMIM8Q96KF7 97 aa14.83□□□□□ -0.03
SSB-201ENST00000260956 PIGMQ9H3S5 423 aa14.83□□□□□ -0.03
SSB-201ENST00000260956 WFDC1Q9HC57 220 aa14.83□□□□□ -0.03
SSB-201ENST00000260956 UNC79Q9P2D8 2635 aa14.83□□□□□ -0.03
SSB-201ENST00000260956 TRAV39A0A0B4J263 110 aa14.83□□□□□ -0.04
SSB-201ENST00000260956 C19orf84I3L1E1 186 aa14.83□□□□□ -0.04
SSB-201ENST00000260956 WNT9BO14905 357 aa14.83□□□□□ -0.04
SSB-201ENST00000260956 ST8SIA3O43173 380 aa14.83□□□□□ -0.04
SSB-201ENST00000260956 GPR137BO60478 399 aa14.83□□□□□ -0.04
SSB-201ENST00000260956 HAND1O96004 215 aa14.83□□□□□ -0.04
SSB-201ENST00000260956 CHRNB4P30926 498 aa14.83□□□□□ -0.04
SSB-201ENST00000260956 C3orf36Q3SXR2 165 aa14.83□□□□□ -0.04
SSB-201ENST00000260956 ZNF826PQ6ZT77 177 aa14.83□□□□□ -0.04
SSB-201ENST00000260956 BEND4Q6ZU67 534 aa14.83□□□□□ -0.04
SSB-201ENST00000260956 UBAC2Q8NBM4 344 aa14.83□□□□□ -0.04
SSB-201ENST00000260956 RNF141Q8WVD5 230 aa14.83□□□□□ -0.04
SSB-201ENST00000260956 PARP12Q9H0J9 701 aaKnown RBP14.83□□□□□ -0.04
SSB-201ENST00000260956 HSD17B6O14756 317 aa14.82□□□□□ -0.04
SSB-201ENST00000260956 SCGB1D2O95969 90 aa14.82□□□□□ -0.04
SSB-201ENST00000260956 GRPP07492 148 aa14.82□□□□□ -0.04
SSB-201ENST00000260956 AGAP20933 346 aa14.82□□□□□ -0.04
SSB-201ENST00000260956 BMP5P22003 454 aa14.82□□□□□ -0.04
SSB-201ENST00000260956 F2RP25116 425 aa14.82□□□□□ -0.04
SSB-201ENST00000260956 HOXA4Q00056 320 aaPredicted RBP14.82□□□□□ -0.04
SSB-201ENST00000260956 TFF3Q07654 80 aa14.82□□□□□ -0.04
SSB-201ENST00000260956 GPR157Q5UAW9 335 aa14.82□□□□□ -0.04
SSB-201ENST00000260956 UQCC3Q6UW78 93 aa14.82□□□□□ -0.04
SSB-201ENST00000260956 C1orf174Q8IYL3 243 aa14.82□□□□□ -0.04
SSB-201ENST00000260956 OR10J5Q8NHC4 309 aa14.82□□□□□ -0.04
SSB-201ENST00000260956 MARC2Q969Z3 335 aa14.82□□□□□ -0.04
SSB-201ENST00000260956 TOLLIPQ9H0E2 274 aa14.82□□□□□ -0.04
SSB-201ENST00000260956 COQ3Q9NZJ6 369 aa14.82□□□□□ -0.04
SSB-201ENST00000260956 IGHV3-64DA0A0J9YX35 117 aa14.81□□□□□ -0.04
SSB-201ENST00000260956 FAM90A27PA6NNH2 459 aa14.81□□□□□ -0.04
SSB-201ENST00000260956 SH2D1BO14796 132 aa14.81□□□□□ -0.04
SSB-201ENST00000260956 HEXAP06865 529 aa14.81□□□□□ -0.04
SSB-201ENST00000260956 CEBPDP49716 269 aaPredicted RBP14.81□□□□□ -0.04
SSB-201ENST00000260956 SULT1A2P50226 295 aa14.81□□□□□ -0.04
SSB-201ENST00000260956 EIF5AP63241 154 aaKnown RBP14.81□□□□□ -0.04
SSB-201ENST00000260956 ACP7Q6ZNF0 438 aa14.81□□□□□ -0.04
SSB-201ENST00000260956 ODF3L1Q8IXM7 274 aa14.81□□□□□ -0.04
SSB-201ENST00000260956 CA5BP1Q8WTZ4 195 aa14.81□□□□□ -0.04
SSB-201ENST00000260956 SAT2Q96F10 170 aaPredicted RBP14.81□□□□□ -0.04
SSB-201ENST00000260956 TAF9BQ9HBM6 251 aa14.81□□□□□ -0.04
SSB-201ENST00000260956 OR2S2Q9NQN1 319 aa14.81□□□□□ -0.04
SSB-201ENST00000260956 UBE2J1Q9Y385 318 aaPredicted RBP14.81□□□□□ -0.04
SSB-201ENST00000260956 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.8□□□□□ -0.04
SSB-201ENST00000260956 A0A0G2JRQ6 117 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 PITX3O75364 302 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 CLDN14O95500 239 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 PAX5Q02548 391 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 ZNF718Q3SXZ3 478 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 PRAMEF6Q5VXH4 476 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 SPERTQ8NA61 448 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 BPIFCQ8NFQ6 507 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 OR10V1Q8NGI7 309 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 COQ2Q96H96 371 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 TAAR3PQ9P1P4 343 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 ZSCAN5BA6NJL1 495 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 KIAA1324LA8MWY0 1029 aaPredicted RBP14.8□□□□□ -0.04
SSB-201ENST00000260956 ADAM20O43506 726 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 TIMM8AO60220 97 aaPredicted RBP14.8□□□□□ -0.04
SSB-201ENST00000260956 JTBO76095 146 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 IGKV1-39P01597 117 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 IGKV1D-39P04432 117 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 VDAC1P21796 283 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 LPAR6P43657 344 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 NKX6-1P78426 367 aaPredicted RBP14.8□□□□□ -0.04
SSB-201ENST00000260956 ID3Q02535 119 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 TIMM23BQ5SRD1 257 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 ZNF295-AS1Q8N0V1 137 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 SPIN2AQ99865 258 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 SPIN2BQ9BPZ2 258 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 MS4A7Q9GZW8 240 aaPredicted RBP14.8□□□□□ -0.04
SSB-201ENST00000260956 TAS2R3Q9NYW6 316 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 FZR1Q9UM11 496 aa14.8□□□□□ -0.04
SSB-201ENST00000260956 CSMD2Q7Z408 3487 aa14.79□□□□□ -0.04
SSB-201ENST00000260956 NUDT19A8MXV4 375 aa14.79□□□□□ -0.04
SSB-201ENST00000260956 CD200P41217 278 aa14.79□□□□□ -0.04
SSB-201ENST00000260956 OR3A1P47881 315 aa14.79□□□□□ -0.04
SSB-201ENST00000260956 EIF4EBP1Q13541 118 aaPredicted RBP14.79□□□□□ -0.04
SSB-201ENST00000260956 SLC35E4Q6ICL7 350 aa14.79□□□□□ -0.04
SSB-201ENST00000260956 ZNF695Q8IW36 515 aa14.79□□□□□ -0.04
SSB-201ENST00000260956 CMTM1Q8IZ96 169 aa14.79□□□□□ -0.04
SSB-201ENST00000260956 LYPD6BQ8NI32 183 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms