RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 A0A1W2PPV9 198 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 TCRBV5S1A1TA0A578 114 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 NBR2O15453 112 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 CELA3BP08861 270 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 FCGR2AP12318 317 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 PVRP15151 417 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 SRIP30626 198 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 TGFBR3Q03167 851 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 KIAA0040Q15053 153 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 PDCD1Q15116 288 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 SYT14P1Q58G82 188 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 SLC35F2Q8IXU6 374 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 APCDD1LQ8NCL9 501 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 OR10AG1Q8NH19 301 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 SGK494Q96LW2 274 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 NMES1Q9C002 83 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 WNT10AQ9GZT5 417 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 SPANXB1Q9NS25 103 aaPredicted RBP6.63□□□□□ -1.35
GPNMB-201ENST00000258733 SPCS1Q9Y6A9 102 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 DSPPQ9NZW4 1301 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 TRGV10A0A0A0MS01 117 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 ZNF816-ZNF321PA0A0X1KG74 233 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 A0A1W2PPI3 338 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 TMEM229AB2RXF0 380 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 ZNF253O75346 499 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 MOSP00540 346 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 THBDP07204 575 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 PTHLHP12272 177 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 FCGR2BP31994 310 aaPredicted RBP6.63□□□□□ -1.35
GPNMB-201ENST00000258733 ACSF3Q4G176 576 aaPredicted RBP6.63□□□□□ -1.35
GPNMB-201ENST00000258733 Q6ZUT4 128 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 TEX29Q8N6K0 151 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 SCCPDHQ8NBX0 429 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 OR10G7Q8NGN6 311 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 OR2I1PQ8NGU4 316 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 GGTLC1Q9BX51 225 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 ELOVL3Q9HB03 270 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 RNF114Q9Y508 228 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 DPRXA6NFQ7 191 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 TMEM212A6NML5 194 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 SIRPB1O00241 398 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 SYNGR1O43759 233 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 SEC11BP0C7V7 166 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 EMP1P54849 157 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 CTBP1Q13363 440 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 TBR1Q16650 682 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 FAM174BQ3ZCQ3 159 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 ZNF385BQ569K4 471 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 LRRC25Q8N386 305 aaPredicted RBP6.63□□□□□ -1.35
GPNMB-201ENST00000258733 SIGLECL1Q8N7X8 197 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 RNF138Q8WVD3 245 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 NEUROG1Q92886 237 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 AMELYQ99218 206 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 ATP5SQ99766 215 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 CST11Q9H112 138 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 EGLN3Q9H6Z9 239 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 GPR84Q9NQS5 396 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 TAAR3PQ9P1P4 343 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 LINC00312Q9Y6C7 94 aa6.63□□□□□ -1.35
GPNMB-201ENST00000258733 SIP14410 1827 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 A6NDN8 102 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 H3BUT2 72 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 J3KT08 172 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 LINC00694P0DN24 101 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 PRDX2P32119 198 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 GNG5P63218 68 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 PMCHL1Q16048 86 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 RPEL1Q2QD12 228 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 MEIG1Q5JSS6 88 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 SLC25A30Q5SVS4 291 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 GPD1LQ8N335 351 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 OR1L8Q8NGR8 309 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 VSTM2AQ8TAG5 236 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 CT55Q8WUE5 264 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 SOCS4Q8WXH5 440 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 DYNLL2Q96FJ2 89 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 ADTRPQ96IZ2 230 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 MAP1LC3AQ9H492 121 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 POLDIP2Q9Y2S7 368 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 MED12LQ86YW9 2145 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 NUP214P35658 2090 aaPredicted RBP6.62□□□□□ -1.35
GPNMB-201ENST00000258733 GON4LQ3T8J9 2241 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 A0A1W2PS29 197 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 GASTP01350 101 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 C8orf88P0DMB2 117 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 CPMP14384 443 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 EVI2AP22794 236 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 GALR1P47211 349 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 RPS15AP62244 130 aaKnown RBP6.62□□□□□ -1.35
GPNMB-201ENST00000258733 IGFBP7Q16270 282 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 Q6AWC8 147 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 OPN5Q6U736 354 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 CEACAM19Q7Z692 300 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 OR5P2Q8WZ92 322 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 S100A16Q96FQ6 103 aaKnown RBP6.62□□□□□ -1.35
GPNMB-201ENST00000258733 TMEM101Q96IK0 257 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 CDX2Q99626 313 aaPredicted RBP6.62□□□□□ -1.35
GPNMB-201ENST00000258733 TM2D1Q9BX74 207 aa6.62□□□□□ -1.35
GPNMB-201ENST00000258733 EBPLQ9BY08 206 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms