RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 NTF4P34130 210 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 CHRNA7P36544 502 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 CEBPDP49716 269 aaPredicted RBP4.06□□□□□ -1.76
USP44-201ENST00000258499 EDDM3BP56851 147 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 SLC10A1Q14973 349 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 TBC1D28Q2M2D7 210 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 OR13D1Q8NGV5 346 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 MRGPRDQ8TDS7 321 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 C18orf12Q96KH6 178 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 GGACTQ9BVM4 153 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 OR2D2Q9H210 308 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 ARV1Q9H2C2 271 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 MTCH1Q9NZJ7 389 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 FOXD3Q9UJU5 478 aaPredicted RBP4.06□□□□□ -1.76
USP44-201ENST00000258499 ATP23Q9Y6H3 246 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 DOCK11Q5JSL3 2073 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 MUC22E2RYF6 1773 aaPredicted RBP4.06□□□□□ -1.76
USP44-201ENST00000258499 ABCA1O95477 2261 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 RNF212BA8MTL3 300 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 SCGB1D1O95968 90 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 PGA5P0DJD9 388 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 OTX1P32242 354 aaPredicted RBP4.06□□□□□ -1.76
USP44-201ENST00000258499 G6PCP35575 357 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 RAB4BP61018 213 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 FOXO1Q12778 655 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 EIF3IQ13347 325 aaKnown RBP4.06□□□□□ -1.76
USP44-201ENST00000258499 CEACAM21Q3KPI0 293 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 ALKBH6Q3KRA9 238 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 TMPRSS7Q7RTY8 843 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 Q8WTZ3 238 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 FAM173AQ9BQD7 235 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 OR51M1Q9H341 326 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 GCM1Q9NP62 436 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 CLN8Q9UBY8 286 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 TINAGQ9UJW2 476 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 POLDIP2Q9Y2S7 368 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 PKDREJQ9NTG1 2253 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 LRP5LA4QPB2 252 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 SEC14L6B5MCN3 397 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 CYTIPO60759 359 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 SRP19P09132 144 aaKnown RBP4.06□□□□□ -1.76
USP44-201ENST00000258499 OR8U8P0C7N1 319 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 BCL2P10415 239 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 CD46P15529 392 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 GCH1P30793 250 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 PMELP40967 661 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 UCP3P55916 312 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 IL15RAQ13261 267 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 BATFQ16520 125 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 KHDC3LQ587J8 217 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 FFAR4Q5NUL3 377 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 OR5A2Q8NGI9 324 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 GALMQ96C23 342 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 OR4C12Q96R67 309 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 OR2J1Q9GZK6 312 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 ENY2Q9NPA8 101 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 DEPPQ9NTK1 212 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 DLL3Q9NYJ7 618 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 TAAR3PQ9P1P4 343 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 ZMAT5Q9UDW3 170 aaKnown RBP4.06□□□□□ -1.76
USP44-201ENST00000258499 PRSS50Q9UI38 385 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 ANAPC10Q9UM13 185 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 MYO15AQ9UKN7 3530 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 PRR14LQ5THK1 2151 aa4.06□□□□□ -1.76
USP44-201ENST00000258499 ZNF716A6NP11 495 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 H0Y980 276 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 KLRC4-KLRK1H3BQV0 150 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 DNPH1O43598 174 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 CRYAAP02489 173 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 MDH2P40926 338 aaKnown RBP4.05□□□□□ -1.76
USP44-201ENST00000258499 ERVK-16P61578 105 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 TMEM241Q24JQ0 296 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 TMEM41BQ5BJD5 291 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 RIPPLY2Q5TAB7 128 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 PRAMEF5Q5TYX0 476 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 GFI1BQ5VTD9 330 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 PRAMEF6Q5VXH4 476 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 PMS2CLQ68D20 193 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 OR4D5Q8NGN0 318 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 MEGF10Q96KG7 1140 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 PACRGQ96M98 296 aaPredicted RBP4.05□□□□□ -1.76
USP44-201ENST00000258499 OR51I2Q9H344 312 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 RBKSQ9H477 322 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 PATZ1Q9HBE1 687 aaKnown RBP4.05□□□□□ -1.76
USP44-201ENST00000258499 PINLYPA6NC86 204 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 UBE2CO00762 179 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 YKT6O15498 198 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 HSPB1P04792 205 aaKnown RBP4.05□□□□□ -1.76
USP44-201ENST00000258499 CXCL1P09341 107 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 TRGC1P0CF51 173 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 EGR1P18146 543 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 COX5AP20674 150 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 STARD6P59095 220 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 AESQ08117 197 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 SSPNQ14714 243 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 BSXQ3C1V8 233 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 Q3ZCU0 254 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 C10orf91Q5T1B1 145 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 ZNF385CQ66K41 422 aaPredicted RBP4.05□□□□□ -1.76
USP44-201ENST00000258499 SPNS3Q6ZMD2 512 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms