RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 MRGPRFQ96AM1 343 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 FLYWCH2Q96CP2 140 aaKnown RBP11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 CCL28Q9NRJ3 127 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 JKAMPQ9P055 326 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 SLC25A17O43808 307 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 MPDU1O75352 247 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 CA1P00915 261 aaPredicted RBP11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 HIKESHIQ53FT3 197 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 LYG1Q8N1E2 194 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 OR10D3Q8NH80 312 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 NPDC1Q9NQX5 325 aaPredicted RBP11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 GPR132Q9UNW8 380 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 TMEM250H0YL14 139 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 FAM157BP0CG42 384 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 TMEM178AQ8NBL3 297 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 C10orf35Q96D05 121 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 ANAPC13Q9BS18 74 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 ABHD14AQ9BUJ0 271 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 FOXQ1Q9C009 403 aa11.54□□□□□ -0.56
PCDHGA3-201ENST00000253812 DLEC1Q9Y238 1755 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 S1PR2O95136 353 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 BMI1P35226 326 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 JOSD1Q15040 202 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 TGIF2LYQ8IUE0 185 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 TMEM45BQ96B21 275 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 PLPPR2Q96GM1 343 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 LINC00869P0C866 280 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 CTSSP25774 331 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 P2RY4P51582 365 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 EFNB1P98172 346 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 ZNF841Q6ZN19 808 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 NPEPL1Q8NDH3 523 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 VSTM2AQ8TAG5 236 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 LSM10Q969L4 123 aaKnown RBP11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 QTRT1Q9BXR0 403 aaKnown RBP11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 PRDM13Q9H4Q3 707 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 ST6GALNAC2Q9UJ37 374 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 KLK13Q9UKR3 277 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 ICE1Q9Y2F5 2266 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 C1QTNF9BB2RNN3 333 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 KIR2DL1P43626 348 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 KIR2DL2P43627 348 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 NUTF2P61970 127 aaKnown RBP11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 OR1B1Q8NGR6 318 aa11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 RPP25Q9BUL9 199 aaKnown RBP11.53□□□□□ -0.56
PCDHGA3-201ENST00000253812 LOC389332A0A1B0GUA5 103 aa11.52□□□□□ -0.56
PCDHGA3-201ENST00000253812 MAS1LP35410 378 aa11.52□□□□□ -0.56
PCDHGA3-201ENST00000253812 PSMG4Q5JS54 123 aa11.52□□□□□ -0.56
PCDHGA3-201ENST00000253812 TEX29Q8N6K0 151 aa11.52□□□□□ -0.56
PCDHGA3-201ENST00000253812 NT5CQ8TCD5 201 aa11.52□□□□□ -0.56
PCDHGA3-201ENST00000253812 ALKBH3Q96Q83 286 aaPredicted RBP11.52□□□□□ -0.56
PCDHGA3-201ENST00000253812 LYZP61626 148 aa11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 ZBTB34Q8NCN2 500 aa11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 SNRNP40Q96DI7 357 aaKnown RBP11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 OR8B2Q96RD0 313 aa11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 A0A087WWC5 75 aa11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 HYAL3O43820 417 aaPredicted RBP11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 VENTXO95231 258 aa11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 CD8AP01732 235 aa11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 HYAL1Q12794 435 aa11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 EIF3IQ13347 325 aaKnown RBP11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 ZNF141Q15928 474 aa11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 NEUROG1Q92886 237 aa11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 C5orf30Q96GV9 206 aa11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 HDHD3Q9BSH5 251 aaPredicted RBP11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 F11RQ9Y624 299 aaKnown RBP11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 RIF1Q5UIP0 2472 aaKnown RBP11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 KIAA1644Q3SXP7 199 aa11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 WDR34Q96EX3 536 aa11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 TIMD4Q96H15 378 aa11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 THYN1Q9P016 225 aa11.52□□□□□ -0.57
PCDHGA3-201ENST00000253812 METTL12A8MUP2 240 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 M0QZ24 198 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 ARF6P62330 175 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 B4GALNT1Q00973 533 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 CRISPLD2Q9H0B8 497 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 YBX2Q9Y2T7 364 aaKnown RBP11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 PRKNO60260 465 aaPredicted RBP11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 CD1BP29016 333 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 DUSP2Q05923 314 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 C1orf53Q5VUE5 145 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 C10orf113Q5VZT2 155 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 GBGT1Q8N5D6 347 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 NUDT10Q8NFP7 164 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 CABIN1Q9Y6J0 2220 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 EP300Q09472 2414 aaPredicted RBP11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 C2CD4DB7Z1M9 353 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 ACP1P24666 158 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 ID4P47928 161 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 TTC9CQ8N5M4 171 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 OR8B12Q8NGG6 310 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 ZNF764Q96H86 408 aaPredicted RBP11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 HSPB7Q9UBY9 170 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 SIRT4Q9Y6E7 314 aaPredicted RBP11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 DOCK3Q8IZD9 2030 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 TRIP12Q14669 1992 aaPredicted RBP11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 SRFP11831 508 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 MESTQ5EB52 335 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 GLRX5Q86SX6 157 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 OR4X1Q8NH49 305 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms