RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 CLINT1Q14677 625 aa18.25■□□□□ 0.51
CLN6-201ENST00000249806 FAM53AQ6NSI3 398 aaPredicted RBP18.25■□□□□ 0.51
CLN6-201ENST00000249806 ACP7Q6ZNF0 438 aa18.25■□□□□ 0.51
CLN6-201ENST00000249806 IL22RA2Q969J5 263 aa18.25■□□□□ 0.51
CLN6-201ENST00000249806 PARP11Q9NR21 331 aa18.25■□□□□ 0.51
CLN6-201ENST00000249806 UQCC1Q9NVA1 299 aa18.25■□□□□ 0.51
CLN6-201ENST00000249806 KCNS2Q9ULS6 477 aa18.25■□□□□ 0.51
CLN6-201ENST00000249806 F8W036 122 aa18.24■□□□□ 0.51
CLN6-201ENST00000249806 PTBP3O95758 552 aaKnown RBP18.24■□□□□ 0.51
CLN6-201ENST00000249806 SPP1P10451 314 aa18.24■□□□□ 0.51
CLN6-201ENST00000249806 FHITP49789 147 aa18.24■□□□□ 0.51
CLN6-201ENST00000249806 ZNF83P51522 516 aa18.24■□□□□ 0.51
CLN6-201ENST00000249806 MSMPQ1L6U9 139 aa18.24■□□□□ 0.51
CLN6-201ENST00000249806 SWI5Q1ZZU3 235 aa18.24■□□□□ 0.51
CLN6-201ENST00000249806 GPR146Q96CH1 333 aa18.24■□□□□ 0.51
CLN6-201ENST00000249806 TLNRD1Q9H1K6 362 aa18.24■□□□□ 0.51
CLN6-201ENST00000249806 FAM212BQ9NTI7 297 aaPredicted RBP18.24■□□□□ 0.51
CLN6-201ENST00000249806 CHST1O43916 411 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 IGKV1-39P01597 117 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 IGKV1D-39P04432 117 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 SEC11BP0C7V7 166 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 MBNL2Q5VZF2 373 aaKnown RBP18.23■□□□□ 0.51
CLN6-201ENST00000249806 LRP11Q86VZ4 500 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 ODF3L1Q8IXM7 274 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 TMEM252Q8N6L7 170 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 OR1L1Q8NH94 360 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 NKX6-2Q9C056 277 aaPredicted RBP18.23■□□□□ 0.51
CLN6-201ENST00000249806 LYRM2Q9NU23 88 aaPredicted RBP18.23■□□□□ 0.51
CLN6-201ENST00000249806 METRNQ9UJH8 293 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 ICE1Q9Y2F5 2266 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 C1QL1O75973 258 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 ZNF16P17020 682 aaPredicted RBP18.23■□□□□ 0.51
CLN6-201ENST00000249806 NBL1P41271 181 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 OR3A1P47881 315 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 VAMP2P63027 116 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 Q6ZRM9 215 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 S100PBPQ96BU1 408 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 ESRP2Q9H6T0 727 aaKnown RBP18.23■□□□□ 0.51
CLN6-201ENST00000249806 PLEKHF2Q9H8W4 249 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 DUSP13Q9UII6 198 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 RFNGQ9Y644 331 aa18.23■□□□□ 0.51
CLN6-201ENST00000249806 FAM74A7A6NL05 159 aa18.22■□□□□ 0.51
CLN6-201ENST00000249806 DNASE2O00115 360 aaPredicted RBP18.22■□□□□ 0.51
CLN6-201ENST00000249806 F12P00748 615 aaPredicted RBP18.22■□□□□ 0.51
CLN6-201ENST00000249806 TUBG1P23258 451 aa18.22■□□□□ 0.51
CLN6-201ENST00000249806 F2RL1P55085 397 aa18.22■□□□□ 0.51
CLN6-201ENST00000249806 TAGLNQ01995 201 aaKnown RBP18.22■□□□□ 0.51
CLN6-201ENST00000249806 FAM74A3Q4VXF1 159 aa18.22■□□□□ 0.51
CLN6-201ENST00000249806 PUSL1Q8N0Z8 303 aaKnown RBP18.22■□□□□ 0.51
CLN6-201ENST00000249806 TMEM171Q8WVE6 324 aa18.22■□□□□ 0.51
CLN6-201ENST00000249806 TUBG2Q9NRH3 451 aa18.22■□□□□ 0.51
CLN6-201ENST00000249806 TMEM30CPA0ZSE6 113 aa18.22■□□□□ 0.51
CLN6-201ENST00000249806 MEX3AA1L020 520 aaKnown RBP18.22■□□□□ 0.51
CLN6-201ENST00000249806 C12orf77C9JDV5 145 aa18.22■□□□□ 0.51
CLN6-201ENST00000249806 CST7O76096 145 aa18.22■□□□□ 0.51
CLN6-201ENST00000249806 DANCRP0C864 163 aa18.22■□□□□ 0.51
CLN6-201ENST00000249806 TPRX1Q8N7U7 411 aa18.22■□□□□ 0.51
CLN6-201ENST00000249806 OR2Z1Q8NG97 314 aa18.22■□□□□ 0.51
CLN6-201ENST00000249806 COQ2Q96H96 371 aa18.22■□□□□ 0.51
CLN6-201ENST00000249806 KCNIP1Q9NZI2 227 aa18.22■□□□□ 0.51
CLN6-201ENST00000249806 RNF150Q9ULK6 438 aa18.22■□□□□ 0.51
CLN6-201ENST00000249806 RNF115Q9Y4L5 304 aa18.22■□□□□ 0.51
CLN6-201ENST00000249806 MED19A0JLT2 244 aaPredicted RBP18.21■□□□□ 0.51
CLN6-201ENST00000249806 DRAM1Q8N682 238 aa18.21■□□□□ 0.51
CLN6-201ENST00000249806 AKR1E2Q96JD6 320 aa18.21■□□□□ 0.51
CLN6-201ENST00000249806 SMG1Q96Q15 3661 aaKnown RBP18.21■□□□□ 0.51
CLN6-201ENST00000249806 RNASEK-C17orf49H0YIS7 233 aa18.21■□□□□ 0.5
CLN6-201ENST00000249806 M0R1B8 84 aa18.21■□□□□ 0.5
CLN6-201ENST00000249806 PITX3O75364 302 aa18.21■□□□□ 0.5
CLN6-201ENST00000249806 EIF2S3P41091 472 aaKnown RBP18.21■□□□□ 0.5
CLN6-201ENST00000249806 ZNF585BQ52M93 769 aa18.21■□□□□ 0.5
CLN6-201ENST00000249806 C10orf91Q5T1B1 145 aa18.21■□□□□ 0.5
CLN6-201ENST00000249806 TMEM217Q8N7C4 229 aa18.21■□□□□ 0.5
CLN6-201ENST00000249806 LYPD6BQ8NI32 183 aa18.21■□□□□ 0.5
CLN6-201ENST00000249806 SNIP1Q8TAD8 396 aaKnown RBP18.21■□□□□ 0.5
CLN6-201ENST00000249806 ABHD14BQ96IU4 210 aa18.21■□□□□ 0.5
CLN6-201ENST00000249806 WASF3Q9UPY6 502 aa18.21■□□□□ 0.5
CLN6-201ENST00000249806 ACACAQ13085 2346 aa18.2■□□□□ 0.5
CLN6-201ENST00000249806 WRBO00258 174 aa18.2■□□□□ 0.5
CLN6-201ENST00000249806 GABRA2P47869 451 aa18.2■□□□□ 0.5
CLN6-201ENST00000249806 PAX9P55771 341 aa18.2■□□□□ 0.5
CLN6-201ENST00000249806 COL10A1Q03692 680 aa18.2■□□□□ 0.5
CLN6-201ENST00000249806 OR52L2PQ8NGH6 319 aa18.2■□□□□ 0.5
CLN6-201ENST00000249806 OR5C1Q8NGR4 320 aa18.2■□□□□ 0.5
CLN6-201ENST00000249806 RNASE11Q8TAA1 199 aaKnown RBP18.2■□□□□ 0.5
CLN6-201ENST00000249806 GALMQ96C23 342 aa18.2■□□□□ 0.5
CLN6-201ENST00000249806 USF3Q68DE3 2245 aa18.2■□□□□ 0.5
CLN6-201ENST00000249806 C9JQL5 133 aa18.19■□□□□ 0.5
CLN6-201ENST00000249806 ATF4P18848 351 aaPredicted RBP18.19■□□□□ 0.5
CLN6-201ENST00000249806 CD80P33681 288 aa18.19■□□□□ 0.5
CLN6-201ENST00000249806 ZNF616Q08AN1 781 aa18.19■□□□□ 0.5
CLN6-201ENST00000249806 C1orf185Q5T7R7 199 aa18.19■□□□□ 0.5
CLN6-201ENST00000249806 SLC35E4Q6ICL7 350 aa18.19■□□□□ 0.5
CLN6-201ENST00000249806 SVBPQ8N300 66 aa18.19■□□□□ 0.5
CLN6-201ENST00000249806 FAM169BQ8N8A8 192 aa18.19■□□□□ 0.5
CLN6-201ENST00000249806 MRGPRDQ8TDS7 321 aa18.19■□□□□ 0.5
CLN6-201ENST00000249806 SLC25A31Q9H0C2 315 aa18.19■□□□□ 0.5
CLN6-201ENST00000249806 CACFD1Q9UGQ2 172 aa18.19■□□□□ 0.5
CLN6-201ENST00000249806 PIEZO2Q9H5I5 2752 aa18.19■□□□□ 0.5
CLN6-201ENST00000249806 A0A1B0GU03 582 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms