RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 MESTQ5EB52 335 aa9.54□□□□□ -0.88
RFPL3-201ENST00000249007 SLC35D3Q5M8T2 416 aa9.54□□□□□ -0.88
RFPL3-201ENST00000249007 ZNF788Q6ZQV5 615 aa9.54□□□□□ -0.88
RFPL3-201ENST00000249007 PTCHD4Q6ZW05 846 aa9.54□□□□□ -0.88
RFPL3-201ENST00000249007 DCXRQ7Z4W1 244 aa9.54□□□□□ -0.88
RFPL3-201ENST00000249007 C11orf53Q8IXP5 236 aa9.54□□□□□ -0.88
RFPL3-201ENST00000249007 FAM185AQ8N0U4 392 aa9.54□□□□□ -0.88
RFPL3-201ENST00000249007 TOMM5Q8N4H5 51 aa9.54□□□□□ -0.88
RFPL3-201ENST00000249007 NKAIN3Q8N8D7 197 aa9.54□□□□□ -0.88
RFPL3-201ENST00000249007 OR8S1Q8NH09 359 aa9.54□□□□□ -0.88
RFPL3-201ENST00000249007 FOXRED1Q96CU9 486 aaPredicted RBP9.54□□□□□ -0.88
RFPL3-201ENST00000249007 GAFA1Q96PS6 74 aa9.54□□□□□ -0.88
RFPL3-201ENST00000249007 SYT4Q9H2B2 425 aa9.54□□□□□ -0.88
RFPL3-201ENST00000249007 ELL3Q9HB65 397 aaPredicted RBP9.54□□□□□ -0.88
RFPL3-201ENST00000249007 COMMD3Q9UBI1 195 aa9.54□□□□□ -0.88
RFPL3-201ENST00000249007 PRR23D1E9PI22 279 aaPredicted RBP9.53□□□□□ -0.88
RFPL3-201ENST00000249007 E9PI62 339 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 M0QZK8 103 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 TNFRSF11BO00300 401 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 ZNF593O00488 134 aaPredicted RBP9.53□□□□□ -0.88
RFPL3-201ENST00000249007 KHDRBS3O75525 346 aaKnown RBP9.53□□□□□ -0.88
RFPL3-201ENST00000249007 TFF1P04155 84 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 PRR23D2P0DMB1 279 aaPredicted RBP9.53□□□□□ -0.88
RFPL3-201ENST00000249007 ECI1P42126 302 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 LUMP51884 338 aaPredicted RBP9.53□□□□□ -0.88
RFPL3-201ENST00000249007 MRPS10P82664 201 aaKnown RBP9.53□□□□□ -0.88
RFPL3-201ENST00000249007 ZNF92Q03936 586 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 ALKBH1Q13686 389 aaKnown RBP9.53□□□□□ -0.88
RFPL3-201ENST00000249007 MEP1BQ16820 701 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 FAM74A1Q5RGS3 127 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 PLBD1Q6P4A8 553 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 GLDNQ6ZMI3 551 aaPredicted RBP9.53□□□□□ -0.88
RFPL3-201ENST00000249007 DPY19L4Q7Z388 723 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 WDR86Q86TI4 376 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 ARRDC1Q8N5I2 433 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 SLC24A4Q8NFF2 622 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 OR2AE1Q8NHA4 323 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 LYZL4Q96KX0 146 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 Q96M85 177 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 SMAD5-AS1Q9Y6J3 95 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 KIAA1109Q2LD37 5005 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 SIGLEC5O15389 551 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 CREBL2O60519 120 aaPredicted RBP9.53□□□□□ -0.88
RFPL3-201ENST00000249007 OR2F2O95006 317 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 DDTP30046 118 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 KIR3DL2P43630 455 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 CRISP1P54107 249 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 FABP9Q0Z7S8 132 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 PIN1Q13526 163 aaPredicted RBP9.53□□□□□ -0.88
RFPL3-201ENST00000249007 OR2F1Q13607 317 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 KCNMB1Q16558 191 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 C22orf42Q6IC83 251 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 ALKAL2Q6UX46 152 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 TMEM91Q6ZNR0 172 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 OR56B2PQ8NGI1 322 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 OR13C3Q8NGS6 347 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 PCNPQ8WW12 178 aaKnown RBP9.53□□□□□ -0.88
RFPL3-201ENST00000249007 FEVQ99581 238 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 JAM3Q9BX67 310 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 ARL6Q9H0F7 186 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 WDR13Q9H1Z4 485 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 ZMAT4Q9H898 229 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 GAB2Q9UQC2 676 aa9.53□□□□□ -0.88
RFPL3-201ENST00000249007 ALMS1Q8TCU4 4167 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 FGF16O43320 207 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 RHBDL1O75783 438 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 ZNF682O95780 498 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 HOXB5P09067 269 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 HOXA5P20719 270 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 MYCNOSP40205 109 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 DYNLT3P51808 116 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 RAB40BQ12829 278 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 FHL1Q13642 323 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 SNAI3Q3KNW1 292 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 TMEM244Q5VVB8 128 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 ZNF626Q68DY1 528 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 C12orf73Q69YU5 71 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 C8orf86Q6ZUL3 223 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 TSEN54Q7Z6J9 526 aaKnown RBP9.52□□□□□ -0.89
RFPL3-201ENST00000249007 ZNF511Q8NB15 262 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 DNAAF1Q8NEP3 725 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 OR9Q2Q8NGE9 314 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 OR13C2Q8NGS9 318 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 ARL11Q969Q4 196 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 HSH2DQ96JZ2 352 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 P2RX4Q99571 388 aa9.52□□□□□ -0.89
RFPL3-201ENST00000249007 POLR2J3Q9H1A7 115 aaKnown RBP9.52□□□□□ -0.89
RFPL3-201ENST00000249007 hCG_1809904A0A1W2PP81 198 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 A0A1W2PPE2 198 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 A0A1W2PR64 198 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 A0A1W2PRV1 198 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 UBE2QL1A1L167 161 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 M0R135 149 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 CDIPTO14735 213 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 RAB3DO95716 219 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 CD14P08571 375 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 ZNF44P15621 663 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 S100A2P29034 98 aa9.51□□□□□ -0.89
RFPL3-201ENST00000249007 CDX1P47902 265 aaPredicted RBP9.51□□□□□ -0.89
RFPL3-201ENST00000249007 CEBPDP49716 269 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms