RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 LIAT1Q6ZQX7 453 aa11.8□□□□□ -0.52
SDF2-201ENST00000247020 DEFB108BQ8NET1 73 aa11.8□□□□□ -0.52
SDF2-201ENST00000247020 PDCD10Q9BUL8 212 aa11.8□□□□□ -0.52
SDF2-201ENST00000247020 LINC00574Q9H8X3 128 aa11.8□□□□□ -0.52
SDF2-201ENST00000247020 TRGV10A0A0A0MS01 117 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 C3orf85A0A1B0GTC6 90 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 DUXBA0A1W2PPF3 345 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 ZNF729A6NN14 1252 aaPredicted RBP11.79□□□□□ -0.52
SDF2-201ENST00000247020 HMSDA8MTL9 139 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 C19orf84I3L1E1 186 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 ITGB1BP1O14713 200 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 OR5AC1P0C628 307 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 EDDM3BP56851 147 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 MEF2CQ06413 473 aaPredicted RBP11.79□□□□□ -0.52
SDF2-201ENST00000247020 LGI3Q8N145 548 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 TPRX1Q8N7U7 411 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 EDARADDQ8WWZ3 215 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 CCL28Q9NRJ3 127 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 A6NNC1 897 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 H0Y980 276 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 TMPRSS2O15393 492 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 YPEL1O60688 119 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 IFNA21P01568 189 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 SSTR5P35346 364 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 TBC1D26Q86UD7 250 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 ZNF645Q8N7E2 425 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 FAM216BQ8N7L0 139 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 OR11H4Q8NGC9 324 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 OR10A7Q8NGE5 316 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 GLYATL2Q8WU03 294 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 IL22RA2Q969J5 263 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 MSI2Q96DH6 328 aaKnown RBP11.79□□□□□ -0.52
SDF2-201ENST00000247020 YPEL2Q96QA6 119 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 TMEM222Q9H0R3 208 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 METTL8Q9H825 291 aaKnown RBP11.79□□□□□ -0.52
SDF2-201ENST00000247020 OR2S2Q9NQN1 319 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 TAS2R3Q9NYW6 316 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 CALYQ9NYX4 217 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 COMMD9Q9P000 198 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 SLC25A10Q9UBX3 287 aaPredicted RBP11.79□□□□□ -0.52
SDF2-201ENST00000247020 UBE2J1Q9Y385 318 aaPredicted RBP11.79□□□□□ -0.52
SDF2-201ENST00000247020 RBM7Q9Y580 266 aaKnown RBP11.79□□□□□ -0.52
SDF2-201ENST00000247020 LINC00312Q9Y6C7 94 aa11.79□□□□□ -0.52
SDF2-201ENST00000247020 hADV38S2A0JD32 116 aa11.78□□□□□ -0.52
SDF2-201ENST00000247020 C5orf51A6NDU8 294 aa11.78□□□□□ -0.52
SDF2-201ENST00000247020 RNF212BA8MTL3 300 aa11.78□□□□□ -0.52
SDF2-201ENST00000247020 HSD17B6O14756 317 aa11.78□□□□□ -0.52
SDF2-201ENST00000247020 UCP1P25874 307 aa11.78□□□□□ -0.52
SDF2-201ENST00000247020 LRRC10Q5BKY1 277 aa11.78□□□□□ -0.52
SDF2-201ENST00000247020 C9orf62Q8N4C0 152 aa11.78□□□□□ -0.52
SDF2-201ENST00000247020 OR52M1Q8NGK5 317 aa11.78□□□□□ -0.52
SDF2-201ENST00000247020 C2orf50Q96LR7 162 aa11.78□□□□□ -0.52
SDF2-201ENST00000247020 TMEM56Q96MV1 263 aa11.78□□□□□ -0.52
SDF2-201ENST00000247020 TMEM56-RWDD3S4R434 201 aa11.78□□□□□ -0.52
SDF2-201ENST00000247020 ROS1P08922 2347 aa11.77□□□□□ -0.52
SDF2-201ENST00000247020 KBTBD11-OT1A0A1B0GTJ5 212 aa11.77□□□□□ -0.53
SDF2-201ENST00000247020 CCSO14618 274 aa11.77□□□□□ -0.53
SDF2-201ENST00000247020 PHF1O43189 567 aaPredicted RBP11.77□□□□□ -0.53
SDF2-201ENST00000247020 NDUFB3O43676 98 aa11.77□□□□□ -0.53
SDF2-201ENST00000247020 PGLYRP1O75594 196 aaPredicted RBP11.77□□□□□ -0.53
SDF2-201ENST00000247020 RP2O75695 350 aa11.77□□□□□ -0.53
SDF2-201ENST00000247020 C1QL1O75973 258 aa11.77□□□□□ -0.53
SDF2-201ENST00000247020 SOD3P08294 240 aa11.77□□□□□ -0.53
SDF2-201ENST00000247020 SELLP14151 372 aa11.77□□□□□ -0.53
SDF2-201ENST00000247020 C4BPBP20851 252 aa11.77□□□□□ -0.53
SDF2-201ENST00000247020 F2RP25116 425 aa11.77□□□□□ -0.53
SDF2-201ENST00000247020 ESCO2Q56NI9 601 aa11.77□□□□□ -0.53
SDF2-201ENST00000247020 MEX3BQ6ZN04 569 aaKnown RBP11.77□□□□□ -0.53
SDF2-201ENST00000247020 TCTEX1D1Q8N7M0 179 aa11.77□□□□□ -0.53
SDF2-201ENST00000247020 OR52L2PQ8NGH6 319 aa11.77□□□□□ -0.53
SDF2-201ENST00000247020 C18orf12Q96KH6 178 aa11.77□□□□□ -0.53
SDF2-201ENST00000247020 TMEM246Q9BRR3 403 aa11.77□□□□□ -0.53
SDF2-201ENST00000247020 CLN8Q9UBY8 286 aa11.77□□□□□ -0.53
SDF2-201ENST00000247020 TMED3Q9Y3Q3 217 aa11.77□□□□□ -0.53
SDF2-201ENST00000247020 PKDREJQ9NTG1 2253 aa11.77□□□□□ -0.53
SDF2-201ENST00000247020 A0A1B0GW55 424 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 FAM25EA8MYX2 175 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 GPR37O15354 613 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 ADAM20O43506 726 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 IGLV2-14P01704 120 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 IGHV2-70P01814 119 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 PRB1P04280 392 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 DUX4L2P0CJ85 424 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 DUX4L3P0CJ86 424 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 DUX4L4P0CJ87 422 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 DUX4L5P0CJ88 424 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 DUX4L6P0CJ89 424 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 DUX4L7P0CJ90 424 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 SLC25A4P12235 298 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 C17orf58Q2M2W7 97 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 LAMTOR1Q6IAA8 161 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 TMEM65Q6PI78 240 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 DUX4L9Q6RFH8 374 aaPredicted RBP11.76□□□□□ -0.53
SDF2-201ENST00000247020 UBALD1Q8TB05 177 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 PPP1R1CQ8WVI7 109 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 TP53RKQ96S44 253 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 SPOCK3Q9BQ16 436 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 DCTN5Q9BTE1 182 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 FAM212BQ9NTI7 297 aaPredicted RBP11.76□□□□□ -0.53
SDF2-201ENST00000247020 LIN7CQ9NUP9 197 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms