RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 TSTD3H0UI37 97 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 RPL36A-HNRNPH2H7BZ11 118 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 WNT9BO14905 357 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 IL2RAP01589 272 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 ZNF718Q3SXZ3 478 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 FAM208BQ5VWN6 2430 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 MDFIC2A0A1B0GVS7 189 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 ZNF320A2RRD8 509 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 PINLYPA6NC86 204 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 FGF5P12034 268 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 STARD6P59095 220 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 HFEQ30201 348 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 LYG1Q8N1E2 194 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 RIMS4Q9H426 269 aaPredicted RBP11.78□□□□□ -0.52
NCLN-201ENST00000246117 MTCH1Q9NZJ7 389 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 CYTIPO60759 359 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 TRA2AQ13595 282 aaKnown RBP eCLIP11.78□□□□□ -0.52
NCLN-201ENST00000246117 FAM210BQ96KR6 192 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 PARP11Q9NR21 331 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 OR2W1Q9Y3N9 320 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 POMT1Q9Y6A1 747 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 MUC6Q6W4X9 2439 aa11.78□□□□□ -0.52
NCLN-201ENST00000246117 H0Y8G0 127 aa11.77□□□□□ -0.52
NCLN-201ENST00000246117 ZNF737O75373 536 aa11.77□□□□□ -0.52
NCLN-201ENST00000246117 NAAAQ02083 359 aa11.77□□□□□ -0.52
NCLN-201ENST00000246117 TMEM211Q6ICI0 200 aa11.77□□□□□ -0.52
NCLN-201ENST00000246117 TMEM9BQ9NQ34 198 aa11.77□□□□□ -0.52
NCLN-201ENST00000246117 IGKV1D-13A0A0B4J2D9 117 aa11.77□□□□□ -0.53
NCLN-201ENST00000246117 IGKV1-13P0DP09 117 aa11.77□□□□□ -0.53
NCLN-201ENST00000246117 HOXA4Q00056 320 aaPredicted RBP11.77□□□□□ -0.53
NCLN-201ENST00000246117 TMEM187Q14656 261 aa11.77□□□□□ -0.53
NCLN-201ENST00000246117 PRR27Q6MZM9 219 aa11.77□□□□□ -0.53
NCLN-201ENST00000246117 OR1L1Q8NH94 360 aa11.77□□□□□ -0.53
NCLN-201ENST00000246117 CACFD1Q9UGQ2 172 aa11.77□□□□□ -0.53
NCLN-201ENST00000246117 ALPK3Q96L96 1907 aa11.77□□□□□ -0.53
NCLN-201ENST00000246117 IGKV1-27A0A075B6S5 117 aa11.77□□□□□ -0.53
NCLN-201ENST00000246117 F2RP25116 425 aa11.77□□□□□ -0.53
NCLN-201ENST00000246117 BAGE3Q86Y29 109 aa11.77□□□□□ -0.53
NCLN-201ENST00000246117 BAGE2Q86Y30 109 aa11.77□□□□□ -0.53
NCLN-201ENST00000246117 FAM103A1Q9BTL3 118 aaKnown RBP11.77□□□□□ -0.53
NCLN-201ENST00000246117 IFT22Q9H7X7 185 aa11.77□□□□□ -0.53
NCLN-201ENST00000246117 TMEM30CPA0ZSE6 113 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 IGSF23A1L1A6 192 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 VKORC1L1Q8N0U8 176 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 FAM131CQ96AQ9 280 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 ACY3Q96HD9 319 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 TMEM222Q9H0R3 208 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 KLF7O75840 302 aaPredicted RBP11.76□□□□□ -0.53
NCLN-201ENST00000246117 DEFA4P12838 97 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 COX5AP20674 150 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 RND3P61587 244 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 MRPL14Q6P1L8 145 aaKnown RBP11.76□□□□□ -0.53
NCLN-201ENST00000246117 GPR146Q96CH1 333 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 IMMP1LQ96LU5 166 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 ARFGEF3Q5TH69 2177 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 LDLRAD4O15165 306 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 TRGC2P03986 189 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 CELA3BP08861 270 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 SEC11BP0C7V7 166 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 HLA-DRB3P79483 266 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 ACSM6Q6P461 480 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 OR10G4Q8NGN3 311 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 OR10G9Q8NGN4 311 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 OR10G7Q8NGN6 311 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 RNF166Q96A37 237 aaPredicted RBP11.76□□□□□ -0.53
NCLN-201ENST00000246117 MOB3AQ96BX8 217 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 TPPP3Q9BW30 176 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 DOK5Q9P104 306 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 WIPF3A6NGB9 483 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 C17orf112F2Z3M2 114 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 MARVELD3Q96A59 401 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 S1PR3Q99500 378 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 DCTN5Q9BTE1 182 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 ACTR3CQ9C0K3 210 aaPredicted RBP11.76□□□□□ -0.53
NCLN-201ENST00000246117 PROCRQ9UNN8 238 aa11.76□□□□□ -0.53
NCLN-201ENST00000246117 K7ESF4 209 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 SYNGR3O43761 229 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 CCL20P78556 96 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 RPL19P84098 196 aaKnown RBP11.75□□□□□ -0.53
NCLN-201ENST00000246117 H3F3AP84243 136 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 LINC00518Q8N0U6 118 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 ZIC4Q8N9L1 334 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 TMEM68Q96MH6 324 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 LRFN3Q9BTN0 628 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 ZNF71Q9NQZ8 489 aaPredicted RBP11.75□□□□□ -0.53
NCLN-201ENST00000246117 DLL3Q9NYJ7 618 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 VSTM5A8MXK1 200 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 PAGE4O60829 102 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 PGLYRP1O75594 196 aaPredicted RBP11.75□□□□□ -0.53
NCLN-201ENST00000246117 CDS2O95674 445 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 HAND1O96004 215 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 MMP7P09237 267 aaPredicted RBP11.75□□□□□ -0.53
NCLN-201ENST00000246117 NTF3P20783 257 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 HGFACQ04756 655 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 ZNF705AQ6ZN79 300 aaPredicted RBP11.75□□□□□ -0.53
NCLN-201ENST00000246117 RAB40CQ96S21 281 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 TLN1Q9Y490 2541 aaKnown RBP11.75□□□□□ -0.53
NCLN-201ENST00000246117 OR2H2O95918 312 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 PTGDSP41222 190 aa11.75□□□□□ -0.53
NCLN-201ENST00000246117 FGF12P61328 243 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms