RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 SHBQ15464 509 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 IZUMO4Q1ZYL8 232 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 ALKBH6Q3KRA9 238 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 OPN3Q9H1Y3 402 aaPredicted RBP10.01□□□□□ -0.81
SOX9-201ENST00000245479 STARD10Q9Y365 291 aa10.01□□□□□ -0.81
SOX9-201ENST00000245479 USF3Q68DE3 2245 aa10□□□□□ -0.81
SOX9-201ENST00000245479 MPPED1O15442 326 aa10□□□□□ -0.81
SOX9-201ENST00000245479 DTYMKP23919 212 aa10□□□□□ -0.81
SOX9-201ENST00000245479 FNDC7Q5VTL7 733 aa10□□□□□ -0.81
SOX9-201ENST00000245479 OR10S1Q8NGN2 331 aa10□□□□□ -0.81
SOX9-201ENST00000245479 EDARADDQ8WWZ3 215 aa10□□□□□ -0.81
SOX9-201ENST00000245479 MRGPRX4Q96LA9 322 aa10□□□□□ -0.81
SOX9-201ENST00000245479 KCNK17Q96T54 332 aa10□□□□□ -0.81
SOX9-201ENST00000245479 RSG1Q9BU20 258 aa10□□□□□ -0.81
SOX9-201ENST00000245479 TP53TG5Q9Y2B4 290 aa10□□□□□ -0.81
SOX9-201ENST00000245479 NOTCH3Q9UM47 2321 aa10□□□□□ -0.81
SOX9-201ENST00000245479 DHRS3O75911 302 aa10□□□□□ -0.81
SOX9-201ENST00000245479 CELA3AP09093 270 aa10□□□□□ -0.81
SOX9-201ENST00000245479 SRP19P09132 144 aaKnown RBP10□□□□□ -0.81
SOX9-201ENST00000245479 CRISP2P16562 243 aa10□□□□□ -0.81
SOX9-201ENST00000245479 CYB561P49447 251 aa10□□□□□ -0.81
SOX9-201ENST00000245479 GPM6AP51674 278 aa10□□□□□ -0.81
SOX9-201ENST00000245479 MRGPRGQ86SM5 289 aa10□□□□□ -0.81
SOX9-201ENST00000245479 TBC1D26Q86UD7 250 aa10□□□□□ -0.81
SOX9-201ENST00000245479 CADM4Q8NFZ8 388 aa10□□□□□ -0.81
SOX9-201ENST00000245479 ADGRG7Q96K78 797 aa10□□□□□ -0.81
SOX9-201ENST00000245479 HIST1H2BLQ99880 126 aa10□□□□□ -0.81
SOX9-201ENST00000245479 RTBDNQ9BSG5 229 aaPredicted RBP10□□□□□ -0.81
SOX9-201ENST00000245479 TRBV6-7A0A0A0MS04 114 aa10□□□□□ -0.81
SOX9-201ENST00000245479 TMEM14DPA8MWL7 114 aa10□□□□□ -0.81
SOX9-201ENST00000245479 KIAA1324LA8MWY0 1029 aaPredicted RBP10□□□□□ -0.81
SOX9-201ENST00000245479 AMTP48728 403 aa10□□□□□ -0.81
SOX9-201ENST00000245479 SUCLG1P53597 346 aaKnown RBP10□□□□□ -0.81
SOX9-201ENST00000245479 FAM3BP58499 235 aaPredicted RBP10□□□□□ -0.81
SOX9-201ENST00000245479 ARG2P78540 354 aa10□□□□□ -0.81
SOX9-201ENST00000245479 TNFRSF9Q07011 255 aa10□□□□□ -0.81
SOX9-201ENST00000245479 RAB31Q13636 194 aa10□□□□□ -0.81
SOX9-201ENST00000245479 PLAC9Q5JTB6 97 aa10□□□□□ -0.81
SOX9-201ENST00000245479 TMEM164Q5U3C3 297 aa10□□□□□ -0.81
SOX9-201ENST00000245479 RABEPKQ7Z6M1 372 aa10□□□□□ -0.81
SOX9-201ENST00000245479 OR10P1Q8NGE3 313 aa10□□□□□ -0.81
SOX9-201ENST00000245479 NAT6Q93015 286 aa10□□□□□ -0.81
SOX9-201ENST00000245479 TMEM230Q96A57 120 aa10□□□□□ -0.81
SOX9-201ENST00000245479 CIB3Q96Q77 187 aaPredicted RBP10□□□□□ -0.81
SOX9-201ENST00000245479 IGF2RP11717 2491 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 LOC102724200A0A096LPH7 203 aaPredicted RBP9.99□□□□□ -0.81
SOX9-201ENST00000245479 CRYM-AS1A6NIL9 109 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 GRPP07492 148 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 VDAC1P21796 283 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 RPP30P78346 268 aaKnown RBP9.99□□□□□ -0.81
SOX9-201ENST00000245479 CXorf66Q5JRM2 361 aaPredicted RBP9.99□□□□□ -0.81
SOX9-201ENST00000245479 TMEM105Q8N8V8 129 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 OR2M3Q8NG83 312 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 OR10D3Q8NH80 312 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 POC1BQ8TC44 478 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 ABHD14AQ9BUJ0 271 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 LYRM2Q9NU23 88 aaPredicted RBP9.99□□□□□ -0.81
SOX9-201ENST00000245479 APOA2P02652 100 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 ISG15P05161 165 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 CD82P27701 267 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 DCAF12Q5T6F0 453 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 H1FOOQ8IZA3 346 aaPredicted RBP9.99□□□□□ -0.81
SOX9-201ENST00000245479 RAB40CQ96S21 281 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 ZNF552Q9H707 407 aaPredicted RBP9.99□□□□□ -0.81
SOX9-201ENST00000245479 HDGFL3Q9Y3E1 203 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 H0Y8G0 127 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 PITX3O75364 302 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 PPYP01298 95 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 SMIM15Q7Z3B0 74 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 ZNF596Q8TC21 504 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 MRPL30Q8TCC3 161 aaKnown RBP9.99□□□□□ -0.81
SOX9-201ENST00000245479 GINS3Q9BRX5 216 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 CACNG5Q9UF02 275 aa9.99□□□□□ -0.81
SOX9-201ENST00000245479 FCN1O00602 326 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 IGHV2-5P01817 119 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 CTXN2P0C2S0 81 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 GNG10P50151 68 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 CCL11P51671 97 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 NUTF2P61970 127 aaKnown RBP9.98□□□□□ -0.81
SOX9-201ENST00000245479 CCL20P78556 96 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 HOXA4Q00056 320 aaPredicted RBP9.98□□□□□ -0.81
SOX9-201ENST00000245479 JOSD1Q15040 202 aaPredicted RBP9.98□□□□□ -0.81
SOX9-201ENST00000245479 OR5AU1Q8NGC0 362 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 LOXL2Q9Y4K0 774 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 HS3ST3B1Q9Y662 390 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 ARFGEF3Q5TH69 2177 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 ATXN7O15265 892 aaPredicted RBP9.98□□□□□ -0.81
SOX9-201ENST00000245479 TRAF3IP2O43734 574 aaPredicted RBP9.98□□□□□ -0.81
SOX9-201ENST00000245479 FOXG1P55316 489 aaPredicted RBP9.98□□□□□ -0.81
SOX9-201ENST00000245479 ERVFRD-1P60508 538 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 COL10A1Q03692 680 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 LHFPL2Q6ZUX7 228 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 C1QL4Q86Z23 238 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 SLC25A43Q8WUT9 341 aaPredicted RBP9.98□□□□□ -0.81
SOX9-201ENST00000245479 NEIL1Q96FI4 390 aaPredicted RBP9.98□□□□□ -0.81
SOX9-201ENST00000245479 IGKV1D-8A0A087WSZ0 117 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 PAQR4Q8N4S7 273 aaPredicted RBP9.98□□□□□ -0.81
SOX9-201ENST00000245479 SPSB1Q96BD6 273 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 STARD4Q96DR4 205 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 ACY3Q96HD9 319 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms