RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 BSCL2Q96G97 398 aaPredicted RBP15.48■□□□□ 0.07
HOXC11-201ENST00000243082 SPIN2AQ99865 258 aa15.48■□□□□ 0.07
HOXC11-201ENST00000243082 SPIN2BQ9BPZ2 258 aa15.48■□□□□ 0.07
HOXC11-201ENST00000243082 TOLLIPQ9H0E2 274 aa15.48■□□□□ 0.07
HOXC11-201ENST00000243082 DNTTIP1Q9H147 329 aa15.48■□□□□ 0.07
HOXC11-201ENST00000243082 SEBOXQ9HB31 216 aaPredicted RBP15.48■□□□□ 0.07
HOXC11-201ENST00000243082 PPP1R3CQ9UQK1 317 aa15.48■□□□□ 0.07
HOXC11-201ENST00000243082 RBM7Q9Y580 266 aaKnown RBP15.48■□□□□ 0.07
HOXC11-201ENST00000243082 A8MXK9 166 aa15.47■□□□□ 0.07
HOXC11-201ENST00000243082 THBDP07204 575 aa15.47■□□□□ 0.07
HOXC11-201ENST00000243082 P2RY1P47900 373 aa15.47■□□□□ 0.07
HOXC11-201ENST00000243082 SELENOVP59797 346 aa15.47■□□□□ 0.07
HOXC11-201ENST00000243082 EIF4E3Q8N5X7 224 aaKnown RBP15.47■□□□□ 0.07
HOXC11-201ENST00000243082 BOLLQ8N9W6 283 aaKnown RBP15.47■□□□□ 0.07
HOXC11-201ENST00000243082 OR52L2PQ8NGH6 319 aa15.47■□□□□ 0.07
HOXC11-201ENST00000243082 OR13A1Q8NGR1 328 aa15.47■□□□□ 0.07
HOXC11-201ENST00000243082 DPRXA6NFQ7 191 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 IL2RGP31785 369 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 GATA4P43694 442 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 NKX2-1P43699 371 aaPredicted RBP15.46■□□□□ 0.07
HOXC11-201ENST00000243082 UCNP55089 124 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 GPR157Q5UAW9 335 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 THOC7Q6I9Y2 204 aaKnown RBP15.46■□□□□ 0.07
HOXC11-201ENST00000243082 CLEC9AQ6UXN8 241 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 WFDC8Q8IUA0 241 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 LURAP1Q96LR2 239 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 KCNS2Q9ULS6 477 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 TLN1Q9Y490 2541 aaKnown RBP15.46■□□□□ 0.07
HOXC11-201ENST00000243082 IGHV3OR15-7A0A075B7D8 119 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 A0A1B0GW55 424 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 SHOXO15266 292 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 GPR137BO60478 399 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 SERPINE2P07093 398 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 FAM157CP0CG43 387 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 DUX4L2P0CJ85 424 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 DUX4L3P0CJ86 424 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 DUX4L4P0CJ87 422 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 DUX4L5P0CJ88 424 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 DUX4L6P0CJ89 424 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 DUX4L7P0CJ90 424 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 PTAFRP25105 342 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 RBPJQ06330 500 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 GNMTQ14749 295 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 CXorf66Q5JRM2 361 aaPredicted RBP15.46■□□□□ 0.07
HOXC11-201ENST00000243082 DRAM1Q8N682 238 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 DUX4Q9UBX2 424 aa15.46■□□□□ 0.07
HOXC11-201ENST00000243082 A0A0G2JRQ6 117 aa15.45■□□□□ 0.06
HOXC11-201ENST00000243082 IGKV1-39P01597 117 aa15.45■□□□□ 0.06
HOXC11-201ENST00000243082 IGHV1-46P01743 117 aa15.45■□□□□ 0.06
HOXC11-201ENST00000243082 GAPDHP04406 335 aaKnown RBP15.45■□□□□ 0.06
HOXC11-201ENST00000243082 IGKV1D-39P04432 117 aa15.45■□□□□ 0.06
HOXC11-201ENST00000243082 SSTR5P35346 364 aa15.45■□□□□ 0.06
HOXC11-201ENST00000243082 POLR2GP62487 172 aaKnown RBP eCLIP15.45■□□□□ 0.06
HOXC11-201ENST00000243082 EIF5AP63241 154 aaKnown RBP15.45■□□□□ 0.06
HOXC11-201ENST00000243082 SMIM3Q9BZL3 60 aa15.45■□□□□ 0.06
HOXC11-201ENST00000243082 ID3Q02535 119 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 CCDC28AQ8IWP9 274 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 LRRC20Q8TCA0 184 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 RNF141Q8WVD5 230 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 ABHD14BQ96IU4 210 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 DCTN5Q9BTE1 182 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 IL19Q9UHD0 177 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 PLCE1Q9P212 2302 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 CACNA1DQ01668 2161 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 LGALS8O00214 317 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 ABCD4O14678 606 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 JTBO76095 146 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 ZNF585BQ52M93 769 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 RND1Q92730 232 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 GPR146Q96CH1 333 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 SNX22Q96L94 193 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 LINC00052Q96N35 136 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 GCM1Q9NP62 436 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 SESN1Q9Y6P5 492 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 NBEAQ8NFP9 2946 aa15.44■□□□□ 0.06
HOXC11-201ENST00000243082 C15orf65H3BRN8 121 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 TNFAIP6P98066 277 aaPredicted RBP15.43■□□□□ 0.06
HOXC11-201ENST00000243082 EDDM3AQ14507 147 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 ZNF645Q8N7E2 425 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 ARL11Q969Q4 196 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 C5orf30Q96GV9 206 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 WFDC1Q9HC57 220 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 RNF150Q9ULK6 438 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 ICE1Q9Y2F5 2266 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 PCNX1Q96RV3 2341 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 IGF2RP11717 2491 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 MEX3AA1L020 520 aaKnown RBP15.43■□□□□ 0.06
HOXC11-201ENST00000243082 PITX3O75364 302 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 ZP3P21754 424 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 PPP1CCP36873 323 aaKnown RBP15.43■□□□□ 0.06
HOXC11-201ENST00000243082 NHLH2Q02577 135 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 BSPH1Q075Z2 132 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 FAM201AQ5SY85 155 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 UBAC2Q8NBM4 344 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 OR1S2Q8NGQ3 325 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 RFESDQ8TAC1 157 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 FAM222BQ8WU58 562 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 VKORC1Q9BQB6 163 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 MAGT1Q9H0U3 335 aa15.43■□□□□ 0.06
HOXC11-201ENST00000243082 PLEKHF2Q9H8W4 249 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms