RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 LRRC75AQ8NAA5 344 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 FOXJ2Q9P0K8 574 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 K7ESF4 209 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 ACTL6AO96019 429 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 M0R1B8 84 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 COX14Q96I36 57 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 GLRX2Q9NS18 164 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 KLK2P20151 261 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 AMMECR1LQ6DCA0 310 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 MRPS11P82912 194 aaKnown RBP7.2□□□□□ -1.26
APOB-201ENST00000233242 EFNB1P98172 346 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 RAB37Q96AX2 223 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 CLDN16Q9Y5I7 305 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 NGFRP08138 427 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 MOB3BQ86TA1 216 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 C8orf44Q96CB5 159 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 QTRT1Q9BXR0 403 aaKnown RBP7.2□□□□□ -1.26
APOB-201ENST00000233242 CCL28Q9NRJ3 127 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 PRR13Q9NZ81 148 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 RAB29O14966 203 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 CA6P23280 308 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 RND3P61587 244 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 GAMTQ14353 236 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 ZNF260Q3ZCT1 412 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 TMEM136Q6ZRR5 245 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 RPEQ96AT9 228 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 SFXN3Q9BWM7 321 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 MRPS18BQ9Y676 258 aaKnown RBP7.19□□□□□ -1.26
APOB-201ENST00000233242 H0YL77 283 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 DUSP2Q05923 314 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 RIPPLY2Q5TAB7 128 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 DEFB108BQ8NET1 73 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 ATAD5Q96QE3 1844 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 IGHV3-15A0A0B4J1V0 119 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 TRGC1P0CF51 173 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 ORM2P19652 201 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 SPATA46Q5T0L3 261 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 LAMTOR1Q6IAA8 161 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 SSX8Q7RTT4 187 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 SIRT4Q9Y6E7 314 aaPredicted RBP7.19□□□□□ -1.26
APOB-201ENST00000233242 SRD5A2P31213 254 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 ATP5IP56385 69 aaPredicted RBP7.19□□□□□ -1.26
APOB-201ENST00000233242 TWIST1Q15672 202 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 SLC35E4Q6ICL7 350 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 CCL4L1Q8NHW4 92 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 MRPL18Q9H0U6 180 aaKnown RBP7.19□□□□□ -1.26
APOB-201ENST00000233242 BGLAPP02818 100 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 P2RY4P51582 365 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 LYZP61626 148 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 IL11RAQ14626 422 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 RPS20P60866 119 aaKnown RBP7.19□□□□□ -1.26
APOB-201ENST00000233242 C19orf48Q6RUI8 117 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 TNFSF14O43557 240 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 NDUFB4O95168 129 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 SOD3P08294 240 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 FCGR3AP08637 254 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 DMRTC1Q5HYR2 192 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 MRGPRDQ8TDS7 321 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 ZCCHC14Q8WYQ9 949 aaKnown RBP7.19□□□□□ -1.26
APOB-201ENST00000233242 C1orf174Q8IYL3 243 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 PATE1Q8WXA2 126 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 DHRS7CA6NNS2 312 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 H3BMH7 237 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 PRRG2O14669 202 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 GFERP55789 205 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 TAF15Q92804 592 aaKnown RBP eCLIP7.19□□□□□ -1.268e-8■□□□□ 8.5
APOB-201ENST00000233242 GABRG3Q99928 467 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 DEFB108AA8MXU0 73 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 NPIPB7O75200 414 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 UNQ9370/PRO34162Q6UXP9 181 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 MIEN1Q9BRT3 115 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 CLN8Q9UBY8 286 aa7.19□□□□□ -1.26
APOB-201ENST00000233242 PLCE1Q9P212 2302 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 FBLL1A6NHQ2 334 aaKnown RBP7.18□□□□□ -1.26
APOB-201ENST00000233242 EPHA8P29322 1005 aaPredicted RBP7.18□□□□□ -1.26
APOB-201ENST00000233242 SDHCQ99643 169 aaPredicted RBP7.18□□□□□ -1.26
APOB-201ENST00000233242 LINC00587B1AMM8 73 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 RASL11BQ9BPW5 248 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 OR2H1Q9GZK4 316 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 ATP23Q9Y6H3 246 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 COL16A1Q07092 1604 aaPredicted RBP7.18□□□□□ -1.26
APOB-201ENST00000233242 NMUP48645 174 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 NANOS3P60323 173 aaKnown RBP7.18□□□□□ -1.26
APOB-201ENST00000233242 SAPCD1Q5SSQ6 148 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 POC1AQ8NBT0 407 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 OR10AG1Q8NH19 301 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 OR4X1Q8NH49 305 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 IBA57Q5T440 356 aaKnown RBP7.18□□□□□ -1.26
APOB-201ENST00000233242 C10orf111Q8N326 155 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 OR10AC1Q8NH08 325 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 GCM2O75603 506 aaPredicted RBP7.18□□□□□ -1.26
APOB-201ENST00000233242 MPLP40238 635 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 CA7P43166 264 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 CST9Q5W186 159 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 OR2Z1Q8NG97 314 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 RFESDQ8TAC1 157 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 NPVFQ9HCQ7 196 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 HOXA5P20719 270 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 IER2Q9BTL4 223 aa7.18□□□□□ -1.26
APOB-201ENST00000233242 TRBV23-1A0A0A0MS06 115 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms