RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 HSD17B6O14756 317 aa18.91■□□□□ 0.62
CDX1-201ENST00000231656 ADH4P08319 380 aa18.91■□□□□ 0.62
CDX1-201ENST00000231656 PET100P0DJ07 73 aa18.91■□□□□ 0.62
CDX1-201ENST00000231656 TNFAIP6P98066 277 aaPredicted RBP18.91■□□□□ 0.62
CDX1-201ENST00000231656 ZCCHC24Q8N2G6 241 aaKnown RBP18.91■□□□□ 0.62
CDX1-201ENST00000231656 OR1S1Q8NH92 325 aa18.91■□□□□ 0.62
CDX1-201ENST00000231656 DIRC2Q96SL1 478 aa18.91■□□□□ 0.62
CDX1-201ENST00000231656 TMEM222Q9H0R3 208 aa18.91■□□□□ 0.62
CDX1-201ENST00000231656 KIF25Q9UIL4 384 aa18.91■□□□□ 0.62
CDX1-201ENST00000231656 FBXO9Q9UK97 447 aaPredicted RBP18.91■□□□□ 0.62
CDX1-201ENST00000231656 LEUTXA8MZ59 168 aa18.91■□□□□ 0.62
CDX1-201ENST00000231656 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.91■□□□□ 0.62
CDX1-201ENST00000231656 TFF1P04155 84 aa18.91■□□□□ 0.62
CDX1-201ENST00000231656 EGR1P18146 543 aa18.91■□□□□ 0.62
CDX1-201ENST00000231656 TNFSF4P23510 183 aa18.91■□□□□ 0.62
CDX1-201ENST00000231656 CFHR2P36980 270 aa18.91■□□□□ 0.62
CDX1-201ENST00000231656 OR3A1P47881 315 aa18.91■□□□□ 0.62
CDX1-201ENST00000231656 S100A10P60903 97 aa18.91■□□□□ 0.62
CDX1-201ENST00000231656 SRPXP78539 464 aa18.91■□□□□ 0.62
CDX1-201ENST00000231656 SWI5Q1ZZU3 235 aa18.91■□□□□ 0.62
CDX1-201ENST00000231656 IL1F10Q8WWZ1 152 aa18.91■□□□□ 0.62
CDX1-201ENST00000231656 UTP20O75691 2785 aaKnown RBP18.9■□□□□ 0.62
CDX1-201ENST00000231656 A6NNC1 897 aa18.9■□□□□ 0.62
CDX1-201ENST00000231656 SRRM5B3KS81 715 aa18.9■□□□□ 0.62
CDX1-201ENST00000231656 RLN2P04090 185 aa18.9■□□□□ 0.62
CDX1-201ENST00000231656 TESK1Q15569 626 aa18.9■□□□□ 0.62
CDX1-201ENST00000231656 COQ2Q96H96 371 aa18.9■□□□□ 0.62
CDX1-201ENST00000231656 TMEM56Q96MV1 263 aa18.9■□□□□ 0.62
CDX1-201ENST00000231656 AQP10Q96PS8 301 aa18.9■□□□□ 0.62
CDX1-201ENST00000231656 ARPC5LQ9BPX5 153 aa18.9■□□□□ 0.62
CDX1-201ENST00000231656 TAF9BQ9HBM6 251 aa18.9■□□□□ 0.62
CDX1-201ENST00000231656 DYNLRB1Q9NP97 96 aa18.9■□□□□ 0.62
CDX1-201ENST00000231656 DNAJB11Q9UBS4 358 aa18.9■□□□□ 0.62
CDX1-201ENST00000231656 METRNQ9UJH8 293 aa18.9■□□□□ 0.62
CDX1-201ENST00000231656 TMEM56-RWDD3S4R434 201 aa18.9■□□□□ 0.62
CDX1-201ENST00000231656 A0A1W2PPR1 153 aa18.89■□□□□ 0.61
CDX1-201ENST00000231656 MSGN1A6NI15 193 aa18.89■□□□□ 0.61
CDX1-201ENST00000231656 PLA2G2AP14555 144 aa18.89■□□□□ 0.61
CDX1-201ENST00000231656 GATA4P43694 442 aa18.89■□□□□ 0.61
CDX1-201ENST00000231656 COL10A1Q03692 680 aa18.89■□□□□ 0.61
CDX1-201ENST00000231656 BVESQ8NE79 360 aa18.89■□□□□ 0.61
CDX1-201ENST00000231656 CITED4Q96RK1 184 aa18.89■□□□□ 0.61
CDX1-201ENST00000231656 MS4A5Q9H3V2 200 aa18.89■□□□□ 0.61
CDX1-201ENST00000231656 KIAA2026Q5HYC2 2103 aa18.89■□□□□ 0.61
CDX1-201ENST00000231656 CD55P08174 381 aa18.88■□□□□ 0.61
CDX1-201ENST00000231656 LUMP51884 338 aaPredicted RBP18.88■□□□□ 0.61
CDX1-201ENST00000231656 CCL8P80075 99 aa18.88■□□□□ 0.61
CDX1-201ENST00000231656 MOGAT3Q86VF5 341 aa18.88■□□□□ 0.61
CDX1-201ENST00000231656 CMTM1Q8IZ96 169 aa18.88■□□□□ 0.61
CDX1-201ENST00000231656 CD177Q8N6Q3 437 aa18.88■□□□□ 0.61
CDX1-201ENST00000231656 SLC35G3Q8N808 338 aa18.88■□□□□ 0.61
CDX1-201ENST00000231656 OR10V1Q8NGI7 309 aa18.88■□□□□ 0.61
CDX1-201ENST00000231656 GPHA2Q96T91 129 aa18.88■□□□□ 0.61
CDX1-201ENST00000231656 ZNF471Q9BX82 626 aaPredicted RBP18.88■□□□□ 0.61
CDX1-201ENST00000231656 TMED3Q9Y3Q3 217 aa18.88■□□□□ 0.61
CDX1-201ENST00000231656 PGLYRP1O75594 196 aaPredicted RBP18.88■□□□□ 0.61
CDX1-201ENST00000231656 NMBP08949 121 aa18.88■□□□□ 0.61
CDX1-201ENST00000231656 AESQ08117 197 aa18.88■□□□□ 0.61
CDX1-201ENST00000231656 TMEM268Q5VZI3 342 aa18.88■□□□□ 0.61
CDX1-201ENST00000231656 FAM90A1Q86YD7 464 aa18.88■□□□□ 0.61
CDX1-201ENST00000231656 PRR18Q8N4B5 295 aa18.88■□□□□ 0.61
CDX1-201ENST00000231656 UBALD1Q8TB05 177 aa18.88■□□□□ 0.61
CDX1-201ENST00000231656 SPOCK3Q9BQ16 436 aa18.88■□□□□ 0.61
CDX1-201ENST00000231656 SEBOXQ9HB31 216 aaPredicted RBP18.88■□□□□ 0.61
CDX1-201ENST00000231656 GCM1Q9NP62 436 aa18.88■□□□□ 0.61
CDX1-201ENST00000231656 UBE2J1Q9Y385 318 aaPredicted RBP18.88■□□□□ 0.61
CDX1-201ENST00000231656 DYSFO75923 2080 aa18.87■□□□□ 0.61
CDX1-201ENST00000231656 DEDDO75618 318 aa18.87■□□□□ 0.61
CDX1-201ENST00000231656 HEXAP06865 529 aa18.87■□□□□ 0.61
CDX1-201ENST00000231656 UCP1P25874 307 aa18.87■□□□□ 0.61
CDX1-201ENST00000231656 NUP62P37198 522 aaPredicted RBP18.87■□□□□ 0.61
CDX1-201ENST00000231656 FAM209AQ5JX71 171 aa18.87■□□□□ 0.61
CDX1-201ENST00000231656 GCSAMQ8N6F7 178 aa18.87■□□□□ 0.61
CDX1-201ENST00000231656 SHARPINQ9H0F6 387 aa18.87■□□□□ 0.61
CDX1-201ENST00000231656 CLEC18AA5D8T8 446 aa18.86■□□□□ 0.61
CDX1-201ENST00000231656 F5H0A9 414 aaPredicted RBP18.86■□□□□ 0.61
CDX1-201ENST00000231656 PSG2P11465 335 aa18.86■□□□□ 0.61
CDX1-201ENST00000231656 PRDX2P32119 198 aa18.86■□□□□ 0.61
CDX1-201ENST00000231656 PAX5Q02548 391 aa18.86■□□□□ 0.61
CDX1-201ENST00000231656 ESCO2Q56NI9 601 aa18.86■□□□□ 0.61
CDX1-201ENST00000231656 FOXRED2Q8IWF2 684 aa18.86■□□□□ 0.61
CDX1-201ENST00000231656 SELENOHQ8IZQ5 122 aaKnown RBP18.86■□□□□ 0.61
CDX1-201ENST00000231656 CLEC18CQ8NCF0 446 aa18.86■□□□□ 0.61
CDX1-201ENST00000231656 KCNIP1Q9NZI2 227 aa18.86■□□□□ 0.61
CDX1-201ENST00000231656 C12orf77C9JDV5 145 aa18.86■□□□□ 0.61
CDX1-201ENST00000231656 H0Y980 276 aa18.86■□□□□ 0.61
CDX1-201ENST00000231656 CDS2O95674 445 aa18.86■□□□□ 0.61
CDX1-201ENST00000231656 LHBP01229 141 aa18.86■□□□□ 0.61
CDX1-201ENST00000231656 IGLV2-14P01704 120 aa18.86■□□□□ 0.61
CDX1-201ENST00000231656 MBPP02686 304 aaPredicted RBP18.86■□□□□ 0.61
CDX1-201ENST00000231656 WNT2P09544 360 aa18.86■□□□□ 0.61
CDX1-201ENST00000231656 ERGIC1Q969X5 290 aa18.86■□□□□ 0.61
CDX1-201ENST00000231656 CYTL1Q9NRR1 136 aa18.86■□□□□ 0.61
CDX1-201ENST00000231656 IGKV1D-17A0A075B6S4 117 aa18.85■□□□□ 0.61
CDX1-201ENST00000231656 OOEPA6NGQ2 149 aa18.85■□□□□ 0.61
CDX1-201ENST00000231656 J3QKU1 62 aa18.85■□□□□ 0.61
CDX1-201ENST00000231656 TNFSF12O43508 249 aa18.85■□□□□ 0.61
CDX1-201ENST00000231656 ZNF737O75373 536 aa18.85■□□□□ 0.61
CDX1-201ENST00000231656 RRASP10301 218 aa18.85■□□□□ 0.61
CDX1-201ENST00000231656 TNFRSF1AP19438 455 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms