RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 DAZAP2Q15038 168 aaPredicted RBP8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 DCAF10Q5QP82 559 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 LIAT1Q6ZQX7 453 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 OR13D1Q8NGV5 346 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 POLR3KQ9Y2Y1 108 aaPredicted RBP8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 NBEAQ8NFP9 2946 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 IGHV1-45A0A0A0MS14 117 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 NRASP01111 189 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 AADACP22760 399 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 ECI1P42126 302 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 DSCR4P56555 118 aaPredicted RBP8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 KRTDAPP60985 99 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 EIF3IQ13347 325 aaKnown RBP8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 MMDQ15546 238 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 MCEMP1Q8IX19 187 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 OR1F12Q8NHA8 337 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 HLA-CQ95604 372 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 SPSB1Q96BD6 273 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 VAMP8Q9BV40 100 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 ANGPTL4Q9BY76 406 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 VAMP5O95183 116 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 IGHV3-9P01782 118 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 COX6A1P12074 109 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 CCL4P13236 92 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 SPINK2P20155 84 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 EPHA8P29322 1005 aaPredicted RBP8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 GNRHRP30968 328 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 PSG4Q00888 419 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 Q5PR19 223 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 ZNF787Q6DD87 383 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 OSR2Q8N2R0 312 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 TMEM256Q8N2U0 113 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 PIGCQ92535 297 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 IMMP1LQ96LU5 166 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 CIB3Q96Q77 187 aaPredicted RBP8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 SYT3Q9BQG1 590 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 KIAA1456Q9P272 454 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 UBE2J1Q9Y385 318 aaPredicted RBP8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 KLF7O75840 302 aaPredicted RBP8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 ZNF266Q14584 549 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 LEMD1Q68G75 181 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 SLC23A3Q6PIS1 610 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 OR4C5Q8NGB2 326 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 C10orf35Q96D05 121 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 HS3ST6Q96QI5 342 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 NKX2-6A6NCS4 301 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 C3orf80F5H4A9 247 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 K7N7A8 449 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 OR7C1O76099 320 aaPredicted RBP8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 OPN1MWP04001 364 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 OPN1MW2P0DN77 364 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 OPN1MW3P0DN78 364 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 FKBP2P26885 142 aaKnown RBP8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 DUSP1P28562 367 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 HINT1P49773 126 aaPredicted RBP8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 ZNF154Q13106 437 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 RAB35Q15286 201 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 S100A7AQ86SG5 101 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 OR2C3Q8N628 320 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 ZNF845Q96IR2 970 aaPredicted RBP8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 ACTR3CQ9C0K3 210 aaPredicted RBP8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 TRIOBPQ9H2D6 2365 aa8.06□□□□□ -1.12
HLA-DOA-201ENST00000229829 K7ESF4 209 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 RFPL3SP0C7P2 107 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 LINC00614P0C842 121 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 DTYMKP23919 212 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 DYNLT3P51808 116 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 SUCLG1P53597 346 aaKnown RBP8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 UCP2P55851 309 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 VAMP3Q15836 100 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 COL5A1-AS1Q5SY13 56 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 MAFAQ8NHW3 353 aaPredicted RBP8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 SAP25Q8TEE9 199 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 PLK3Q9H4B4 646 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 ZNF442Q9H7R0 627 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 TMEM38BQ9NVV0 291 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 RPH3ALQ9UNE2 315 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 M0QZ24 198 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 SERPINA7P05543 415 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 PLA2G5P39877 138 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 NKX2-1P43699 371 aaPredicted RBP8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 SSR4P51571 173 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 RAC1P63000 192 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 CNN3Q15417 329 aaKnown RBP8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 RPS19BP1Q86WX3 136 aaKnown RBP8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 SPEM1Q8N4L4 309 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 LRTM2Q8N967 370 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 MOB3AQ96BX8 217 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 YPEL4Q96NS1 127 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 RSG1Q9BU20 258 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 CRIM1Q9NZV1 1036 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 MRPS17Q9Y2R5 130 aaKnown RBP8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 MRPS18CQ9Y3D5 142 aaKnown RBP8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 RBM7Q9Y580 266 aaKnown RBP8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 ASPMQ8IZT6 3477 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 LOC102723996A0A087X1L8 192 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 M0QZK8 103 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 GALR2O43603 387 aaPredicted RBP8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 CXCL13O43927 109 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 GGCTO75223 188 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms