RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 CACNG5Q9UF02 275 aa18.57■□□□□ 0.56
SMARCD2-201ENST00000225742 MED12LQ86YW9 2145 aa18.57■□□□□ 0.56
SMARCD2-201ENST00000225742 C1orf196B1AJZ1 125 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 FAM90A26D6RGX4 464 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 AQP7O14520 342 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 HAND1O96004 215 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 OR8U8P0C7N1 319 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 SPINK2P20155 84 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 AKIRIN2Q53H80 203 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 ZNF295-AS1Q8N0V1 137 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 CD300LFQ8TDQ1 290 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 COA4Q9NYJ1 87 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 PPP1R3CQ9UQK1 317 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 CDRT15L2A8MXV6 281 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 CEACAM6P40199 344 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 ZNF506Q5JVG8 444 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 SLC35E4Q6ICL7 350 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 IGFL2Q6UWQ7 119 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 TRIB1Q96RU8 372 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 TOLLIPQ9H0E2 274 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 CXXC4Q9H2H0 198 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 RNF150Q9ULK6 438 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 KCNS2Q9ULS6 477 aa18.56■□□□□ 0.56
SMARCD2-201ENST00000225742 C1QTNF9BB2RNN3 333 aa18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 GPR37O15354 613 aa18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 LYZL6O75951 148 aa18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 IGKV1-5P01602 117 aa18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 COX5AP20674 150 aa18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 HOXC12P31275 282 aa18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 ERVS71-1P61550 626 aa18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 PMP22Q01453 160 aa18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 IGFBP7Q16270 282 aa18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 ZNF585BQ52M93 769 aa18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 ETV3LQ6ZN32 361 aa18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 Q6ZRM9 215 aa18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 PIP4P1Q86T03 277 aa18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 VASH2Q86V25 355 aa18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 SCGB1C1Q8TD33 95 aa18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 KLF14Q8TD94 323 aaPredicted RBP18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 PSMG3Q9BT73 122 aaPredicted RBP18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 ABHD14AQ9BUJ0 271 aa18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 PARD6GQ9BYG4 376 aaPredicted RBP18.55■□□□□ 0.56
SMARCD2-201ENST00000225742 NXPH3O95157 252 aa18.54■□□□□ 0.56
SMARCD2-201ENST00000225742 HSPB1P04792 205 aaKnown RBP18.54■□□□□ 0.56
SMARCD2-201ENST00000225742 OR13C7P0DN81 318 aa18.54■□□□□ 0.56
SMARCD2-201ENST00000225742 CCL20P78556 96 aa18.54■□□□□ 0.56
SMARCD2-201ENST00000225742 ALKBH6Q3KRA9 238 aa18.54■□□□□ 0.56
SMARCD2-201ENST00000225742 ZNF561Q8N587 486 aa18.54■□□□□ 0.56
SMARCD2-201ENST00000225742 DRAM1Q8N682 238 aa18.54■□□□□ 0.56
SMARCD2-201ENST00000225742 PRR7Q8TB68 274 aa18.54■□□□□ 0.56
SMARCD2-201ENST00000225742 RARRES2Q99969 163 aa18.54■□□□□ 0.56
SMARCD2-201ENST00000225742 PSENENQ9NZ42 101 aa18.54■□□□□ 0.56
SMARCD2-201ENST00000225742 TRAV39A0A0B4J263 110 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 MED19A0JLT2 244 aaPredicted RBP18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 C3orf80F5H4A9 247 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 IGKV3-15P01624 115 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 GRPP07492 148 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 SRP19P09132 144 aaKnown RBP18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 MAS1LP35410 378 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 HBG1P69891 147 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 HBG2P69892 147 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 HABP2Q14520 560 aaPredicted RBP18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 ACSF3Q4G176 576 aaPredicted RBP18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 C1orf174Q8IYL3 243 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 OBP2BQ9NPH6 170 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 RFNGQ9Y644 331 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 KNTC1P50748 2209 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 OOEPA6NGQ2 149 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 ZNF891A8MT65 544 aaPredicted RBP18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 SLC25A24Q6NUK1 477 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 PRR18Q8N4B5 295 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 ZNF645Q8N7E2 425 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 OR10G4Q8NGN3 311 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 SARAFQ96BY9 339 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 MMP24Q9Y5R2 645 aa18.53■□□□□ 0.56
SMARCD2-201ENST00000225742 TRAV17A0A0B4J275 112 aa18.52■□□□□ 0.56
SMARCD2-201ENST00000225742 A0A1B0GV50 99 aa18.52■□□□□ 0.56
SMARCD2-201ENST00000225742 KITLGP21583 273 aa18.52■□□□□ 0.56
SMARCD2-201ENST00000225742 MPV17P39210 176 aa18.52■□□□□ 0.56
SMARCD2-201ENST00000225742 AKR1C3P42330 323 aa18.52■□□□□ 0.56
SMARCD2-201ENST00000225742 RUNX1Q01196 453 aa18.52■□□□□ 0.56
SMARCD2-201ENST00000225742 KHDC3LQ587J8 217 aa18.52■□□□□ 0.56
SMARCD2-201ENST00000225742 THNSL2Q86YJ6 484 aa18.52■□□□□ 0.56
SMARCD2-201ENST00000225742 GCNT2Q8N0V5 402 aa18.52■□□□□ 0.56
SMARCD2-201ENST00000225742 TCTEX1D1Q8N7M0 179 aa18.52■□□□□ 0.56
SMARCD2-201ENST00000225742 WDR31Q8NA23 367 aa18.52■□□□□ 0.56
SMARCD2-201ENST00000225742 GALMQ96C23 342 aa18.52■□□□□ 0.56
SMARCD2-201ENST00000225742 MALSU1Q96EH3 234 aa18.52■□□□□ 0.56
SMARCD2-201ENST00000225742 OR14J1Q9UGF5 321 aa18.52■□□□□ 0.56
SMARCD2-201ENST00000225742 H0YL77 283 aa18.51■□□□□ 0.55
SMARCD2-201ENST00000225742 SCAF4O95104 1147 aaKnown RBP18.51■□□□□ 0.55
SMARCD2-201ENST00000225742 CCL11P51671 97 aa18.51■□□□□ 0.55
SMARCD2-201ENST00000225742 TMEM267Q0VDI3 215 aaPredicted RBP18.51■□□□□ 0.55
SMARCD2-201ENST00000225742 C11orf53Q8IXP5 236 aa18.51■□□□□ 0.55
SMARCD2-201ENST00000225742 SFT2D1Q8WV19 159 aa18.51■□□□□ 0.55
SMARCD2-201ENST00000225742 PRR33A8MZF0 331 aa18.51■□□□□ 0.55
SMARCD2-201ENST00000225742 WDR1O75083 606 aa18.51■□□□□ 0.55
SMARCD2-201ENST00000225742 ZNF16P17020 682 aaPredicted RBP18.51■□□□□ 0.55
SMARCD2-201ENST00000225742 AGAP20933 346 aa18.51■□□□□ 0.55
SMARCD2-201ENST00000225742 KIR2DL2P43627 348 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms