RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 ARFRP1Q13795 201 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 MORN2Q502X0 79 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 CT45A1Q5HYN5 189 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 TPTE2P1Q5T6R2 138 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 C16orf87Q6PH81 154 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 ZNF554Q86TJ5 538 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 SAMD12Q8N8I0 201 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 ZNF439Q8NDP4 499 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 CT45A3Q8NHU0 189 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 IL1F10Q8WWZ1 152 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 TMEM158Q8WZ71 300 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 MMP28Q9H239 520 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 COMMD3Q9UBI1 195 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 GNG12Q9UBI6 72 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 POMT1Q9Y6A1 747 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 CEPT1Q9Y6K0 416 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 IGKV1D-8A0A087WSZ0 117 aa11.61□□□□□ -0.55
SUPT4H1-201ENST00000225504 IGKV1-6A0A0C4DH72 117 aa11.61□□□□□ -0.55
SUPT4H1-201ENST00000225504 FAM181BA6NEQ2 426 aa11.61□□□□□ -0.55
SUPT4H1-201ENST00000225504 TMEM235A6NFC5 223 aa11.61□□□□□ -0.55
SUPT4H1-201ENST00000225504 LEUTXA8MZ59 168 aa11.61□□□□□ -0.55
SUPT4H1-201ENST00000225504 SSX5O60225 188 aa11.61□□□□□ -0.55
SUPT4H1-201ENST00000225504 FCGR3AP08637 254 aa11.61□□□□□ -0.55
SUPT4H1-201ENST00000225504 LY6EQ16553 131 aa11.61□□□□□ -0.55
SUPT4H1-201ENST00000225504 LRRC75BQ2VPJ9 315 aa11.61□□□□□ -0.55
SUPT4H1-201ENST00000225504 HACD4Q5VWC8 232 aa11.61□□□□□ -0.55
SUPT4H1-201ENST00000225504 TMEM86BQ8N661 226 aa11.61□□□□□ -0.55
SUPT4H1-201ENST00000225504 GALMQ96C23 342 aa11.61□□□□□ -0.55
SUPT4H1-201ENST00000225504 PARP12Q9H0J9 701 aaKnown RBP11.61□□□□□ -0.55
SUPT4H1-201ENST00000225504 ABCG5Q9H222 651 aa11.61□□□□□ -0.55
SUPT4H1-201ENST00000225504 DPAGT1Q9H3H5 408 aa11.61□□□□□ -0.55
SUPT4H1-201ENST00000225504 SERPINE3A8MV23 424 aa11.6□□□□□ -0.55
SUPT4H1-201ENST00000225504 VGLL3A8MV65 326 aa11.6□□□□□ -0.55
SUPT4H1-201ENST00000225504 EIF4EP06730 217 aaKnown RBP11.6□□□□□ -0.55
SUPT4H1-201ENST00000225504 GSTT2P0CG29 244 aa11.6□□□□□ -0.55
SUPT4H1-201ENST00000225504 GSTT2BP0CG30 244 aa11.6□□□□□ -0.55
SUPT4H1-201ENST00000225504 CD24P25063 80 aa11.6□□□□□ -0.55
SUPT4H1-201ENST00000225504 HTD2P86397 168 aa11.6□□□□□ -0.55
SUPT4H1-201ENST00000225504 FBLN7Q53RD9 439 aa11.6□□□□□ -0.55
SUPT4H1-201ENST00000225504 CCBE1Q6UXH8 406 aaPredicted RBP11.6□□□□□ -0.55
SUPT4H1-201ENST00000225504 RAB2BQ8WUD1 216 aa11.6□□□□□ -0.55
SUPT4H1-201ENST00000225504 ZFAND2BQ8WV99 257 aa11.6□□□□□ -0.55
SUPT4H1-201ENST00000225504 NUDCD2Q8WVJ2 157 aa11.6□□□□□ -0.55
SUPT4H1-201ENST00000225504 KCTD12Q96CX2 325 aaKnown RBP11.6□□□□□ -0.55
SUPT4H1-201ENST00000225504 RBMXL1Q96E39 390 aaKnown RBP11.6□□□□□ -0.55
SUPT4H1-201ENST00000225504 OR1A1Q9P1Q5 309 aa11.6□□□□□ -0.55
SUPT4H1-201ENST00000225504 TRDCB7Z8K6 153 aa11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 H3BMQ9 156 aa11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 GPR137BO60478 399 aa11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 HPGDSO60760 199 aa11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 GSTP1P09211 210 aaKnown RBP11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 HLA-DRB3P79483 266 aa11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 MRPS15P82914 257 aaKnown RBP11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 HERPUD1Q15011 391 aa11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 UBE2NLQ5JXB2 153 aa11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 SLC25A48Q6ZT89 311 aaKnown RBP11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 MOB1BQ7L9L4 216 aa11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 LINC00311Q8N616 119 aa11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 C8orf31Q8N9H6 132 aa11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 S100A16Q96FQ6 103 aaKnown RBP11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 OCSTAMPQ9BR26 566 aa11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 ST6GALNAC5Q9BVH7 336 aa11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 AUNIPQ9H7T9 357 aa11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 RAB9BQ9NP90 201 aa11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 DIABLOQ9NR28 239 aa11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 JPT1Q9UK76 154 aa11.59□□□□□ -0.55
SUPT4H1-201ENST00000225504 POM121CA8CG34 1229 aa11.58□□□□□ -0.56
SUPT4H1-201ENST00000225504 YPEL1O60688 119 aa11.58□□□□□ -0.56
SUPT4H1-201ENST00000225504 SCGNO76038 276 aa11.58□□□□□ -0.56
SUPT4H1-201ENST00000225504 ZNF182P17025 639 aaPredicted RBP11.58□□□□□ -0.56
SUPT4H1-201ENST00000225504 ELK1P19419 428 aa11.58□□□□□ -0.56
SUPT4H1-201ENST00000225504 TALDO1P37837 337 aa11.58□□□□□ -0.56
SUPT4H1-201ENST00000225504 REG1BP48304 166 aa11.58□□□□□ -0.56
SUPT4H1-201ENST00000225504 RELBQ01201 579 aa11.58□□□□□ -0.56
SUPT4H1-201ENST00000225504 AANATQ16613 207 aa11.58□□□□□ -0.56
SUPT4H1-201ENST00000225504 IGSF11Q5DX21 431 aa11.58□□□□□ -0.56
SUPT4H1-201ENST00000225504 OR10X1Q8NGY0 326 aa11.58□□□□□ -0.56
SUPT4H1-201ENST00000225504 DYNC2LI1Q8TCX1 351 aa11.58□□□□□ -0.56
SUPT4H1-201ENST00000225504 ST6GALNAC6Q969X2 333 aa11.58□□□□□ -0.56
SUPT4H1-201ENST00000225504 PHF21AQ96BD5 680 aa11.58□□□□□ -0.56
SUPT4H1-201ENST00000225504 ISOC1Q96CN7 298 aa11.58□□□□□ -0.56
SUPT4H1-201ENST00000225504 YPEL2Q96QA6 119 aa11.58□□□□□ -0.56
SUPT4H1-201ENST00000225504 VPREB3Q9UKI3 123 aa11.58□□□□□ -0.56
SUPT4H1-201ENST00000225504 FABP7O15540 132 aa11.57□□□□□ -0.56
SUPT4H1-201ENST00000225504 XRCC3O43542 346 aa11.57□□□□□ -0.56
SUPT4H1-201ENST00000225504 CEACAM3P40198 252 aa11.57□□□□□ -0.56
SUPT4H1-201ENST00000225504 CEACAM6P40199 344 aa11.57□□□□□ -0.56
SUPT4H1-201ENST00000225504 MADCAM1Q13477 382 aa11.57□□□□□ -0.56
SUPT4H1-201ENST00000225504 ARL6IP1Q15041 203 aa11.57□□□□□ -0.56
SUPT4H1-201ENST00000225504 PNLIPRP3Q17RR3 467 aa11.57□□□□□ -0.56
SUPT4H1-201ENST00000225504 TMEM30BQ3MIR4 351 aa11.57□□□□□ -0.56
SUPT4H1-201ENST00000225504 TMEM219Q86XT9 240 aa11.57□□□□□ -0.56
SUPT4H1-201ENST00000225504 OR5R1Q8NH85 324 aa11.57□□□□□ -0.56
SUPT4H1-201ENST00000225504 ACOT12Q8WYK0 555 aa11.57□□□□□ -0.56
SUPT4H1-201ENST00000225504 RPEQ96AT9 228 aa11.57□□□□□ -0.56
SUPT4H1-201ENST00000225504 CREB3L1Q96BA8 519 aa11.57□□□□□ -0.56
SUPT4H1-201ENST00000225504 SLC23A1Q9UHI7 598 aa11.57□□□□□ -0.56
SUPT4H1-201ENST00000225504 AMMECR1Q9Y4X0 333 aaPredicted RBP11.57□□□□□ -0.56
SUPT4H1-201ENST00000225504 A0A0A6YYH2 397 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms