RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 OR51I2Q9H344 312 aa21.14■□□□□ 0.97
RUNDC3A-201ENST00000225441 TRAV1-1A0A0B4J248 108 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 TMEM8BA6NDV4 472 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 ZNF503-AS2A6NEH8 195 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 NGFP01138 241 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 PPP1CCP36873 323 aaKnown RBP21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 DYNLT3P51808 116 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 C9orf135Q5VTT2 229 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 SPSB3Q6PJ21 355 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 STX12Q86Y82 276 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 TMEM171Q8WVE6 324 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 FBXO7Q9Y3I1 522 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 CACNA1GO43497 2377 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 TRAV24A0A0B4J272 114 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 CHST1O43916 411 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 CCL2P13500 99 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 TAS2R30P59541 319 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 FAM180AQ6UWF9 173 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 OR1K1Q8NGR3 316 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 GLRX2Q9NS18 164 aa21.13■□□□□ 0.97
RUNDC3A-201ENST00000225441 C5orf52A6NGY3 159 aa21.12■□□□□ 0.97
RUNDC3A-201ENST00000225441 ZNHIT1O43257 154 aa21.12■□□□□ 0.97
RUNDC3A-201ENST00000225441 HSPB1P04792 205 aaKnown RBP21.12■□□□□ 0.97
RUNDC3A-201ENST00000225441 SERPINE2P07093 398 aa21.12■□□□□ 0.97
RUNDC3A-201ENST00000225441 RAB5AP20339 215 aa21.12■□□□□ 0.97
RUNDC3A-201ENST00000225441 SULT1A1P50225 295 aa21.12■□□□□ 0.97
RUNDC3A-201ENST00000225441 FOXG1P55316 489 aaPredicted RBP21.12■□□□□ 0.97
RUNDC3A-201ENST00000225441 AKR1C8PQ5T2L2 129 aa21.12■□□□□ 0.97
RUNDC3A-201ENST00000225441 C1QL4Q86Z23 238 aa21.12■□□□□ 0.97
RUNDC3A-201ENST00000225441 Q8NA96 180 aa21.12■□□□□ 0.97
RUNDC3A-201ENST00000225441 BCL2L2Q92843 193 aaPredicted RBP21.12■□□□□ 0.97
RUNDC3A-201ENST00000225441 WSB1Q9Y6I7 421 aa21.12■□□□□ 0.97
RUNDC3A-201ENST00000225441 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 UBE2CO00762 179 aa21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 ACSF3Q4G176 576 aaPredicted RBP21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 ODF3L1Q8IXM7 274 aa21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 BATF2Q8N1L9 274 aa21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 OR10G4Q8NGN3 311 aa21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 CD300LFQ8TDQ1 290 aa21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 TCEAL7Q9BRU2 100 aa21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 RTL8AQ9BWD3 113 aa21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 TAAR3PQ9P1P4 343 aa21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 IL36RNQ9UBH0 155 aa21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 S100A6P06703 90 aa21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 PAX9P55771 341 aa21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 EIF2S3LQ2VIR3 472 aaKnown RBP21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 ZNF506Q5JVG8 444 aa21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 OR10V1Q8NGI7 309 aa21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 MAGT1Q9H0U3 335 aa21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 RNF150Q9ULK6 438 aa21.11■□□□□ 0.97
RUNDC3A-201ENST00000225441 A0A087WWC5 75 aa21.1■□□□□ 0.97
RUNDC3A-201ENST00000225441 TMEM50AO95807 157 aa21.1■□□□□ 0.97
RUNDC3A-201ENST00000225441 IFNA5P01569 189 aa21.1■□□□□ 0.97
RUNDC3A-201ENST00000225441 WNT5AP41221 380 aa21.1■□□□□ 0.97
RUNDC3A-201ENST00000225441 AKIRIN2Q53H80 203 aa21.1■□□□□ 0.97
RUNDC3A-201ENST00000225441 Q6P435 159 aa21.1■□□□□ 0.97
RUNDC3A-201ENST00000225441 ETV3LQ6ZN32 361 aa21.1■□□□□ 0.97
RUNDC3A-201ENST00000225441 C2CD4CQ8TF44 421 aa21.1■□□□□ 0.97
RUNDC3A-201ENST00000225441 CLCF1Q9UBD9 225 aa21.1■□□□□ 0.97
RUNDC3A-201ENST00000225441 METTL1Q9UBP6 276 aaKnown RBP21.1■□□□□ 0.97
RUNDC3A-201ENST00000225441 POLDIP2Q9Y2S7 368 aa21.1■□□□□ 0.97
RUNDC3A-201ENST00000225441 TXNL1O43396 289 aa21.09■□□□□ 0.97
RUNDC3A-201ENST00000225441 OR8U8P0C7N1 319 aa21.09■□□□□ 0.97
RUNDC3A-201ENST00000225441 FBXW9Q5XUX1 488 aa21.09■□□□□ 0.97
RUNDC3A-201ENST00000225441 NUFIP2Q7Z417 695 aaKnown RBP21.09■□□□□ 0.97
RUNDC3A-201ENST00000225441 GPR146Q96CH1 333 aa21.09■□□□□ 0.97
RUNDC3A-201ENST00000225441 CNOT4O95628 575 aaKnown RBP21.08■□□□□ 0.97
RUNDC3A-201ENST00000225441 SMIM6P0DI80 62 aa21.08■□□□□ 0.97
RUNDC3A-201ENST00000225441 OMGP23515 440 aa21.08■□□□□ 0.97
RUNDC3A-201ENST00000225441 MRPL49Q13405 166 aaKnown RBP21.08■□□□□ 0.97
RUNDC3A-201ENST00000225441 ZFP82Q8N141 532 aa21.08■□□□□ 0.97
RUNDC3A-201ENST00000225441 PRORYQ9H606 182 aa21.08■□□□□ 0.97
RUNDC3A-201ENST00000225441 KIAA1324LA8MWY0 1029 aaPredicted RBP21.08■□□□□ 0.96
RUNDC3A-201ENST00000225441 ACAA1P09110 424 aaPredicted RBP21.08■□□□□ 0.96
RUNDC3A-201ENST00000225441 SRP19P09132 144 aaKnown RBP21.08■□□□□ 0.96
RUNDC3A-201ENST00000225441 ASCL1P50553 236 aa21.08■□□□□ 0.96
RUNDC3A-201ENST00000225441 KRTCAP3Q53RY4 240 aa21.08■□□□□ 0.96
RUNDC3A-201ENST00000225441 KHDC3LQ587J8 217 aa21.08■□□□□ 0.96
RUNDC3A-201ENST00000225441 C20orf204Q6ZNR8 217 aa21.08■□□□□ 0.96
RUNDC3A-201ENST00000225441 P4HA3Q7Z4N8 544 aa21.08■□□□□ 0.96
RUNDC3A-201ENST00000225441 TRIB1Q96RU8 372 aa21.08■□□□□ 0.96
RUNDC3A-201ENST00000225441 PARD6GQ9BYG4 376 aaPredicted RBP21.08■□□□□ 0.96
RUNDC3A-201ENST00000225441 ERRFI1Q9UJM3 462 aaPredicted RBP21.08■□□□□ 0.96
RUNDC3A-201ENST00000225441 HS3ST1O14792 307 aa21.07■□□□□ 0.96
RUNDC3A-201ENST00000225441 OR13C7P0DN81 318 aa21.07■□□□□ 0.96
RUNDC3A-201ENST00000225441 TBC1D28Q2M2D7 210 aa21.07■□□□□ 0.96
RUNDC3A-201ENST00000225441 RDH5Q92781 318 aa21.07■□□□□ 0.96
RUNDC3A-201ENST00000225441 CHD8Q9HCK8 2581 aa21.07■□□□□ 0.96
RUNDC3A-201ENST00000225441 A0A1W2PPH5 198 aa21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 AHRRA9YTQ3 701 aa21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 HSPB6O14558 160 aa21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 CST7O76096 145 aa21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 AKR1C3P42330 323 aa21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 SNRPEP62304 92 aaKnown RBP21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 CTAG1AP78358 180 aa21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 CISD2Q8N5K1 135 aaKnown RBP21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 PSMG3Q9BT73 122 aaPredicted RBP21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 LIN7CQ9NUP9 197 aaKnown RBP21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 CXorf65A6NEN9 183 aa21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 RNF212BA8MTL3 300 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms