RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 HDHD3Q9BSH5 251 aaPredicted RBP11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 C19orf24Q9BVV8 132 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 KCNIP1Q9NZI2 227 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 HSF4Q9ULV5 492 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 TBL2Q9Y4P3 447 aaKnown RBP11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 IGHV3-43A0A0B4J1X8 118 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 METTL21EPA6NDL7 271 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 CLDN34H7C241 214 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 SPINT2O43291 252 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 HBZP02008 142 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 IGHV3-43DP0DP04 118 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 CD34P28906 385 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 IER3P46695 156 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 GNG10P50151 68 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 FAM189A2Q15884 450 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 SSX2Q16385 188 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 C5orf24Q7Z6I8 188 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 CADM3Q8N126 398 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 DYNAPQ8N1N2 210 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 BEND2Q8NDZ0 799 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 OR10A7Q8NGE5 316 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 OR4P4Q8NGL7 312 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 OR5H6Q8NGV6 325 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 OR10R2Q8NGX6 335 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 OR1L1Q8NH94 360 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 ZMAT3Q9HA38 289 aaKnown RBP11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 TAF9BQ9HBM6 251 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 HILPDAQ9Y5L2 63 aa11.91□□□□□ -0.5
PCOLCE-201ENST00000223061 A0A087X0M5 115 aa11.9□□□□□ -0.5
PCOLCE-201ENST00000223061 A0A1B0GX30 115 aa11.9□□□□□ -0.5
PCOLCE-201ENST00000223061 RNASE1P07998 156 aaKnown RBP11.9□□□□□ -0.5
PCOLCE-201ENST00000223061 IL7P13232 177 aa11.9□□□□□ -0.5
PCOLCE-201ENST00000223061 GNB3P16520 340 aa11.9□□□□□ -0.5
PCOLCE-201ENST00000223061 HTR1DP28221 377 aa11.9□□□□□ -0.5
PCOLCE-201ENST00000223061 PRRX1P54821 245 aa11.9□□□□□ -0.5
PCOLCE-201ENST00000223061 FAM53AQ6NSI3 398 aaPredicted RBP11.9□□□□□ -0.5
PCOLCE-201ENST00000223061 TRAT1Q6PIZ9 186 aa11.9□□□□□ -0.5
PCOLCE-201ENST00000223061 ZNF596Q8TC21 504 aa11.9□□□□□ -0.5
PCOLCE-201ENST00000223061 FAM216AQ8WUB2 273 aa11.9□□□□□ -0.5
PCOLCE-201ENST00000223061 CHAC2Q8WUX2 184 aa11.9□□□□□ -0.5
PCOLCE-201ENST00000223061 CHIAQ9BZP6 476 aa11.9□□□□□ -0.5
PCOLCE-201ENST00000223061 DPAGT1Q9H3H5 408 aa11.9□□□□□ -0.5
PCOLCE-201ENST00000223061 MBNL3Q9NUK0 354 aaKnown RBP11.9□□□□□ -0.5
PCOLCE-201ENST00000223061 TBC1D24Q9ULP9 559 aa11.9□□□□□ -0.5
PCOLCE-201ENST00000223061 KIAA2026Q5HYC2 2103 aa11.9□□□□□ -0.5
PCOLCE-201ENST00000223061 BTBD17A6NE02 478 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 RAB27BO00194 218 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 NAPSAO96009 420 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 HLA-DQB1P01920 261 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 ASAH1Q13510 395 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 MINOS1Q5TGZ0 78 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 Q6ZPA2 131 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 TMEM86BQ8N661 226 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 OR9G1Q8NH87 305 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 MALSU1Q96EH3 234 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 SSX3Q99909 188 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 CMSS1Q9BQ75 279 aaKnown RBP11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 RAB9BQ9NP90 201 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 C12orf4Q9NQ89 552 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 COMMD3Q9UBI1 195 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 PSG11Q9UQ72 335 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 KCNK7Q9Y2U2 307 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 POMT1Q9Y6A1 747 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 MINOS1-NBL1R4GNA1 71 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 A0A1W2PPE3 182 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 H3BUX3 64 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 F2RL2O00254 374 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 TMEM127O75204 238 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 IGLV1-47P01700 117 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 HIST1H1DP16402 221 aaKnown RBP11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 ACTG1P63261 375 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 BAK1Q16611 211 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 LRRC75BQ2VPJ9 315 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 HLA-DRB5Q30154 266 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 CCBE1Q6UXH8 406 aaPredicted RBP11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 OR10V1Q8NGI7 309 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 MEGF9Q9H1U4 602 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 MMP28Q9H239 520 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 RIMS4Q9H426 269 aaPredicted RBP11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 GFOD1Q9NXC2 390 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 DPM3Q9P2X0 92 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 GNG12Q9UBI6 72 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 ETV7Q9Y603 341 aa11.89□□□□□ -0.51
PCOLCE-201ENST00000223061 COL6A5A8TX70 2615 aa11.88□□□□□ -0.51
PCOLCE-201ENST00000223061 J3QR06 171 aa11.88□□□□□ -0.51
PCOLCE-201ENST00000223061 MFNGO00587 321 aa11.88□□□□□ -0.51
PCOLCE-201ENST00000223061 CD3GP09693 182 aa11.88□□□□□ -0.51
PCOLCE-201ENST00000223061 LOXL3P58215 753 aa11.88□□□□□ -0.51
PCOLCE-201ENST00000223061 MRPS15P82914 257 aaKnown RBP11.88□□□□□ -0.51
PCOLCE-201ENST00000223061 CNIH2Q6PI25 160 aa11.88□□□□□ -0.51
PCOLCE-201ENST00000223061 OR52M1Q8NGK5 317 aa11.88□□□□□ -0.51
PCOLCE-201ENST00000223061 TAF15Q92804 592 aaKnown RBP eCLIP11.88□□□□□ -0.51
PCOLCE-201ENST00000223061 SLC25A38Q96DW6 304 aa11.88□□□□□ -0.51
PCOLCE-201ENST00000223061 OR2S2Q9NQN1 319 aa11.88□□□□□ -0.51
PCOLCE-201ENST00000223061 ABRACLQ9P1F3 81 aa11.88□□□□□ -0.51
PCOLCE-201ENST00000223061 LEUTXA8MZ59 168 aa11.87□□□□□ -0.51
PCOLCE-201ENST00000223061 BUB1B-PAK6H3BSN5 160 aa11.87□□□□□ -0.51
PCOLCE-201ENST00000223061 BOLA2-SMG1P6H3BVE0 249 aa11.87□□□□□ -0.51
PCOLCE-201ENST00000223061 HPGDSO60760 199 aa11.87□□□□□ -0.51
PCOLCE-201ENST00000223061 RAB13P51153 203 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms