RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 LRTM2Q8N967 370 aa12.71□□□□□ -0.37
PAF1-201ENST00000221265 OR5T2Q8NGG2 359 aa12.71□□□□□ -0.37
PAF1-201ENST00000221265 OR11L1Q8NGX0 322 aa12.71□□□□□ -0.37
PAF1-201ENST00000221265 C18orf12Q96KH6 178 aa12.71□□□□□ -0.37
PAF1-201ENST00000221265 RSRP1Q9BUV0 290 aa12.71□□□□□ -0.37
PAF1-201ENST00000221265 SUCNR1Q9BXA5 334 aa12.71□□□□□ -0.37
PAF1-201ENST00000221265 RALYQ9UKM9 306 aaKnown RBP12.71□□□□□ -0.37
PAF1-201ENST00000221265 RNF115Q9Y4L5 304 aa12.71□□□□□ -0.37
PAF1-201ENST00000221265 LSM5Q9Y4Y9 91 aaKnown RBP12.71□□□□□ -0.37
PAF1-201ENST00000221265 LRRK2Q5S007 2527 aa12.71□□□□□ -0.37
PAF1-201ENST00000221265 TACC2O95359 2948 aa12.71□□□□□ -0.37
PAF1-201ENST00000221265 PRSS44E7EML9 344 aa12.71□□□□□ -0.38
PAF1-201ENST00000221265 SLC33A1O00400 549 aaPredicted RBP12.71□□□□□ -0.38
PAF1-201ENST00000221265 GLP1RP43220 463 aa12.71□□□□□ -0.38
PAF1-201ENST00000221265 CCL8P80075 99 aa12.71□□□□□ -0.38
PAF1-201ENST00000221265 MZT1Q08AG7 82 aa12.71□□□□□ -0.38
PAF1-201ENST00000221265 IGSF11Q5DX21 431 aa12.71□□□□□ -0.38
PAF1-201ENST00000221265 C20orf204Q6ZNR8 217 aa12.71□□□□□ -0.38
PAF1-201ENST00000221265 LIAT1Q6ZQX7 453 aa12.71□□□□□ -0.38
PAF1-201ENST00000221265 GCSAMQ8N6F7 178 aa12.71□□□□□ -0.38
PAF1-201ENST00000221265 GLYATL2Q8WU03 294 aa12.71□□□□□ -0.38
PAF1-201ENST00000221265 MSI2Q96DH6 328 aaKnown RBP12.71□□□□□ -0.38
PAF1-201ENST00000221265 NARS2Q96I59 477 aaKnown RBP12.71□□□□□ -0.38
PAF1-201ENST00000221265 CRYBG3Q68DQ2 2970 aa12.71□□□□□ -0.38
PAF1-201ENST00000221265 RAI1Q7Z5J4 1906 aaPredicted RBP12.7□□□□□ -0.38
PAF1-201ENST00000221265 H7C1Q1 480 aa12.7□□□□□ -0.38
PAF1-201ENST00000221265 C19orf84I3L1E1 186 aa12.7□□□□□ -0.38
PAF1-201ENST00000221265 K7EPK0 472 aa12.7□□□□□ -0.38
PAF1-201ENST00000221265 MBPP02686 304 aaPredicted RBP12.7□□□□□ -0.38
PAF1-201ENST00000221265 RCC1P18754 421 aaPredicted RBP12.7□□□□□ -0.38
PAF1-201ENST00000221265 DEFA5Q01523 94 aa12.7□□□□□ -0.38
PAF1-201ENST00000221265 SMCO1Q147U7 214 aa12.7□□□□□ -0.38
PAF1-201ENST00000221265 SMUG1Q53HV7 270 aa12.7□□□□□ -0.38
PAF1-201ENST00000221265 FAM201AQ5SY85 155 aa12.7□□□□□ -0.38
PAF1-201ENST00000221265 FAM71E2Q8N5Q1 922 aa12.7□□□□□ -0.38
PAF1-201ENST00000221265 LHFPL5Q8TAF8 219 aa12.7□□□□□ -0.38
PAF1-201ENST00000221265 IFT22Q9H7X7 185 aa12.7□□□□□ -0.38
PAF1-201ENST00000221265 GCM1Q9NP62 436 aa12.7□□□□□ -0.38
PAF1-201ENST00000221265 ZC4H2Q9NQZ6 224 aa12.7□□□□□ -0.38
PAF1-201ENST00000221265 DCAF16Q9NXF7 216 aa12.7□□□□□ -0.38
PAF1-201ENST00000221265 ZDHHC8Q9ULC8 765 aa12.7□□□□□ -0.38
PAF1-201ENST00000221265 TMEM218A2RU14 115 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 C17orf100A8MU93 164 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 NUPL2O15504 423 aaKnown RBP12.69□□□□□ -0.38
PAF1-201ENST00000221265 SCGB1D2O95969 90 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 HAND1O96004 215 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 NAPSAO96009 420 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 PPYP01298 95 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 AKR1C2P52895 323 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 HERV-K104P61576 105 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 SRSF3P84103 164 aaKnown RBP12.69□□□□□ -0.38
PAF1-201ENST00000221265 AKR1C1Q04828 323 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 ARL11Q969Q4 196 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 TAF9BQ9HBM6 251 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 CISD1Q9NZ45 108 aaKnown RBP12.69□□□□□ -0.38
PAF1-201ENST00000221265 LPAR3Q9UBY5 353 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 IL19Q9UHD0 177 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 METRNQ9UJH8 293 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 IGHV3OR15-7A0A075B7D8 119 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 ZNF705EA8MWA4 302 aaPredicted RBP12.69□□□□□ -0.38
PAF1-201ENST00000221265 SRRM5B3KS81 715 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 DNASE2O00115 360 aaPredicted RBP12.69□□□□□ -0.38
PAF1-201ENST00000221265 PSPNO60542 156 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 C1QL1O75973 258 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 GATA4P43694 442 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 SPIN3Q5JUX0 258 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 TMEM268Q5VZI3 342 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 Q6ZS49 121 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 ZNF843Q8N446 348 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 ZNF808Q8N4W9 903 aaPredicted RBP12.69□□□□□ -0.38
PAF1-201ENST00000221265 OR4A4PQ8NGN8 299 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 PLPPR1Q8TBJ4 325 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 SPACA1Q9HBV2 294 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 Q9N2K0 584 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 PLA2G2EQ9NZK7 142 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 FBXL17Q9UF56 701 aa12.69□□□□□ -0.38
PAF1-201ENST00000221265 SH2D1BO14796 132 aa12.68□□□□□ -0.38
PAF1-201ENST00000221265 PHF1O43189 567 aaPredicted RBP12.68□□□□□ -0.38
PAF1-201ENST00000221265 APOBEC3AP31941 199 aaPredicted RBP12.68□□□□□ -0.38
PAF1-201ENST00000221265 TMEM33P57088 247 aa12.68□□□□□ -0.38
PAF1-201ENST00000221265 EIF5AP63241 154 aaKnown RBP12.68□□□□□ -0.38
PAF1-201ENST00000221265 LGI3Q8N145 548 aa12.68□□□□□ -0.38
PAF1-201ENST00000221265 MMP26Q9NRE1 261 aa12.68□□□□□ -0.38
PAF1-201ENST00000221265 TRAV39A0A0B4J263 110 aa12.68□□□□□ -0.38
PAF1-201ENST00000221265 NUDT19A8MXV4 375 aa12.68□□□□□ -0.38
PAF1-201ENST00000221265 CYB5R3P00387 301 aaPredicted RBP12.68□□□□□ -0.38
PAF1-201ENST00000221265 LHBP01229 141 aa12.68□□□□□ -0.38
PAF1-201ENST00000221265 ADCYAP1P18509 176 aa12.68□□□□□ -0.38
PAF1-201ENST00000221265 ATF4P18848 351 aaPredicted RBP12.68□□□□□ -0.38
PAF1-201ENST00000221265 SRSF7Q16629 238 aaKnown RBP eCLIP12.68□□□□□ -0.38
PAF1-201ENST00000221265 SMIM21Q3B7S5 101 aa12.68□□□□□ -0.38
PAF1-201ENST00000221265 CD177Q8N6Q3 437 aa12.68□□□□□ -0.38
PAF1-201ENST00000221265 MRPL30Q8TCC3 161 aaKnown RBP12.68□□□□□ -0.38
PAF1-201ENST00000221265 ERGIC1Q969X5 290 aa12.68□□□□□ -0.38
PAF1-201ENST00000221265 SMIM8Q96KF7 97 aa12.68□□□□□ -0.38
PAF1-201ENST00000221265 TP53RKQ96S44 253 aa12.68□□□□□ -0.38
PAF1-201ENST00000221265 TMEM204Q9BSN7 226 aa12.68□□□□□ -0.38
PAF1-201ENST00000221265 FAM208BQ5VWN6 2430 aa12.67□□□□□ -0.38
PAF1-201ENST00000221265 TPD52L2O43399 206 aaKnown RBP12.67□□□□□ -0.38
PAF1-201ENST00000221265 ATG12O94817 140 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms