RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 GFOD1Q9NXC2 390 aa22.28■■□□□ 1.16
CHMP4B-201ENST00000217402 HSPA12AO43301 675 aa22.27■■□□□ 1.16
CHMP4B-201ENST00000217402 HTD2P86397 168 aa22.27■■□□□ 1.16
CHMP4B-201ENST00000217402 LYSMD2Q8IV50 215 aa22.27■■□□□ 1.16
CHMP4B-201ENST00000217402 GDPD1Q8N9F7 314 aa22.27■■□□□ 1.16
CHMP4B-201ENST00000217402 UPRTQ96BW1 309 aa22.27■■□□□ 1.16
CHMP4B-201ENST00000217402 CABLES2Q9BTV7 478 aa22.27■■□□□ 1.16
CHMP4B-201ENST00000217402 RBMX2Q9Y388 322 aaKnown RBP22.27■■□□□ 1.16
CHMP4B-201ENST00000217402 SVEP1Q4LDE5 3571 aa22.26■■□□□ 1.15
CHMP4B-201ENST00000217402 IGHV3OR16-10A0A075B7F0 116 aa22.26■■□□□ 1.15
CHMP4B-201ENST00000217402 TRAV40A0A0B4J280 105 aa22.26■■□□□ 1.15
CHMP4B-201ENST00000217402 A8MV72 311 aaPredicted RBP22.26■■□□□ 1.15
CHMP4B-201ENST00000217402 RNASEK-C17orf49H0YIS7 233 aa22.26■■□□□ 1.15
CHMP4B-201ENST00000217402 PPP1CCP36873 323 aaKnown RBP22.26■■□□□ 1.15
CHMP4B-201ENST00000217402 LSAMPQ13449 338 aa22.26■■□□□ 1.15
CHMP4B-201ENST00000217402 PNKDQ8N490 385 aa22.26■■□□□ 1.15
CHMP4B-201ENST00000217402 OR5AP2Q8NGF4 316 aa22.26■■□□□ 1.15
CHMP4B-201ENST00000217402 GSX1Q9H4S2 264 aaPredicted RBP22.26■■□□□ 1.15
CHMP4B-201ENST00000217402 JPT1Q9UK76 154 aa22.26■■□□□ 1.15
CHMP4B-201ENST00000217402 PMP2P02689 132 aa22.25■■□□□ 1.15
CHMP4B-201ENST00000217402 GNG10P50151 68 aa22.25■■□□□ 1.15
CHMP4B-201ENST00000217402 TMEM30BQ3MIR4 351 aa22.25■■□□□ 1.15
CHMP4B-201ENST00000217402 STEAP3Q658P3 488 aa22.25■■□□□ 1.15
CHMP4B-201ENST00000217402 NCR3LG1Q68D85 454 aa22.25■■□□□ 1.15
CHMP4B-201ENST00000217402 OR52M1Q8NGK5 317 aa22.25■■□□□ 1.15
CHMP4B-201ENST00000217402 TRIM63Q969Q1 353 aa22.25■■□□□ 1.15
CHMP4B-201ENST00000217402 WDR12Q9GZL7 423 aaKnown RBP22.25■■□□□ 1.15
CHMP4B-201ENST00000217402 HEXA-AS1Q9H8Q6 139 aa22.25■■□□□ 1.15
CHMP4B-201ENST00000217402 IGHV2-26A0A0B4J1V2 119 aa22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 A0A1W2PRD5 423 aa22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 A0A1W2PRF3 423 aa22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 A0A1W2PRM7 423 aa22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 ZBTB25P24278 435 aa22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 HRH1P35367 487 aa22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 TAS2R46P59540 309 aa22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 SSBP1Q04837 148 aaKnown RBP22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 ZNF846Q147U1 533 aa22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 BAK1Q16611 211 aa22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 HCP5Q6MZN7 132 aa22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 Q71RC1 249 aaPredicted RBP22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 OR13D1Q8NGV5 346 aa22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 OR5H2Q8NGV7 314 aa22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 OR10J5Q8NHC4 309 aa22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 GINS4Q9BRT9 223 aa22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 ZNF736B4DX44 427 aaPredicted RBP22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 OR3A3P47888 321 aa22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 ABHD12Q8N2K0 398 aa22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 NECAP2Q9NVZ3 263 aa22.24■■□□□ 1.15
CHMP4B-201ENST00000217402 TRBV6-7A0A0A0MS04 114 aa22.23■■□□□ 1.15
CHMP4B-201ENST00000217402 A0A1W2PPE3 182 aa22.23■■□□□ 1.15
CHMP4B-201ENST00000217402 J3QRK9 145 aa22.23■■□□□ 1.15
CHMP4B-201ENST00000217402 CD3DP04234 171 aa22.23■■□□□ 1.15
CHMP4B-201ENST00000217402 IGHV4-38-2P0DP08 117 aa22.23■■□□□ 1.15
CHMP4B-201ENST00000217402 CEACAM6P40199 344 aa22.23■■□□□ 1.15
CHMP4B-201ENST00000217402 RFX2P48378 723 aa22.23■■□□□ 1.15
CHMP4B-201ENST00000217402 CDK10Q15131 360 aa22.23■■□□□ 1.15
CHMP4B-201ENST00000217402 IL17RELQ6ZVW7 336 aa22.23■■□□□ 1.15
CHMP4B-201ENST00000217402 CLEC7AQ9BXN2 247 aa22.23■■□□□ 1.15
CHMP4B-201ENST00000217402 PARP12Q9H0J9 701 aaKnown RBP22.23■■□□□ 1.15
CHMP4B-201ENST00000217402 EHFQ9NZC4 300 aa22.23■■□□□ 1.15
CHMP4B-201ENST00000217402 PSG11Q9UQ72 335 aa22.23■■□□□ 1.15
CHMP4B-201ENST00000217402 F8P00451 2351 aa22.23■■□□□ 1.15
CHMP4B-201ENST00000217402 A0A087X0M5 115 aa22.22■■□□□ 1.15
CHMP4B-201ENST00000217402 CENPVL3A0A0U1RRI6 287 aa22.22■■□□□ 1.15
CHMP4B-201ENST00000217402 A0A1B0GX30 115 aa22.22■■□□□ 1.15
CHMP4B-201ENST00000217402 M0QYG6 137 aa22.22■■□□□ 1.15
CHMP4B-201ENST00000217402 CSF1P09603 554 aa22.22■■□□□ 1.15
CHMP4B-201ENST00000217402 CTXN2P0C2S0 81 aa22.22■■□□□ 1.15
CHMP4B-201ENST00000217402 MORN2Q502X0 79 aa22.22■■□□□ 1.15
CHMP4B-201ENST00000217402 TRIQKQ629K1 86 aa22.22■■□□□ 1.15
CHMP4B-201ENST00000217402 ZNRD1Q9P1U0 126 aa22.22■■□□□ 1.15
CHMP4B-201ENST00000217402 PPP5CP53041 499 aa22.21■■□□□ 1.15
CHMP4B-201ENST00000217402 TAS2R19P59542 299 aa22.21■■□□□ 1.15
CHMP4B-201ENST00000217402 KLF17Q5JT82 389 aaPredicted RBP22.21■■□□□ 1.15
CHMP4B-201ENST00000217402 FAM120AOSQ5T036 256 aa22.21■■□□□ 1.15
CHMP4B-201ENST00000217402 TMEM229BQ8NBD8 167 aa22.21■■□□□ 1.15
CHMP4B-201ENST00000217402 TSC22D3Q99576 134 aa22.21■■□□□ 1.15
CHMP4B-201ENST00000217402 RDH8Q9NYR8 311 aa22.21■■□□□ 1.15
CHMP4B-201ENST00000217402 TAS2R8Q9NYW2 309 aa22.21■■□□□ 1.15
CHMP4B-201ENST00000217402 ZNF69Q9UC07 566 aa22.21■■□□□ 1.15
CHMP4B-201ENST00000217402 DIRAS3O95661 229 aa22.2■■□□□ 1.15
CHMP4B-201ENST00000217402 OR5H8P0DN80 308 aa22.2■■□□□ 1.15
CHMP4B-201ENST00000217402 NFYAP23511 347 aaPredicted RBP22.2■■□□□ 1.15
CHMP4B-201ENST00000217402 CD34P28906 385 aa22.2■■□□□ 1.15
CHMP4B-201ENST00000217402 GPR157Q5UAW9 335 aa22.2■■□□□ 1.15
CHMP4B-201ENST00000217402 TINAGL1Q9GZM7 467 aaPredicted RBP22.2■■□□□ 1.15
CHMP4B-201ENST00000217402 ANKRD20A5PA0PJZ0 165 aa22.2■■□□□ 1.14
CHMP4B-201ENST00000217402 SLC31A2O15432 143 aa22.2■■□□□ 1.14
CHMP4B-201ENST00000217402 YPEL1O60688 119 aa22.2■■□□□ 1.14
CHMP4B-201ENST00000217402 RGS11O94810 467 aa22.2■■□□□ 1.14
CHMP4B-201ENST00000217402 ARG1P05089 322 aa22.2■■□□□ 1.14
CHMP4B-201ENST00000217402 IL7P13232 177 aa22.2■■□□□ 1.14
CHMP4B-201ENST00000217402 ACTBL2Q562R1 376 aa22.2■■□□□ 1.14
CHMP4B-201ENST00000217402 RNASE10Q5GAN6 216 aaKnown RBP22.2■■□□□ 1.14
CHMP4B-201ENST00000217402 RUSC1-AS1Q66K80 236 aa22.2■■□□□ 1.14
CHMP4B-201ENST00000217402 OR4D10Q8NGI6 311 aa22.2■■□□□ 1.14
CHMP4B-201ENST00000217402 OR9G1Q8NH87 305 aa22.2■■□□□ 1.14
CHMP4B-201ENST00000217402 YPEL2Q96QA6 119 aa22.2■■□□□ 1.14
CHMP4B-201ENST00000217402 ZNF107Q9UII5 783 aaPredicted RBP22.2■■□□□ 1.14
CHMP4B-201ENST00000217402 TOR1AO14656 332 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms