RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SLC25A47Q6Q0C1 308 aa11.83□□□□□ -0.52
SIX4-201ENST00000216513 IGKV3D-11A0A0A0MRZ8 115 aa11.83□□□□□ -0.52
SIX4-201ENST00000216513 C3orf85A0A1B0GTC6 90 aa11.83□□□□□ -0.52
SIX4-201ENST00000216513 GZMKP49863 264 aa11.83□□□□□ -0.52
SIX4-201ENST00000216513 PRB3Q04118 309 aaPredicted RBP11.83□□□□□ -0.52
SIX4-201ENST00000216513 CYB5R2Q6BCY4 276 aa11.83□□□□□ -0.52
SIX4-201ENST00000216513 SMIM7Q9BQ49 75 aa11.83□□□□□ -0.52
SIX4-201ENST00000216513 IGHV2OR16-5A0A0B4J2B6 119 aa11.83□□□□□ -0.52
SIX4-201ENST00000216513 PLA2G2CQ5R387 149 aa11.83□□□□□ -0.52
SIX4-201ENST00000216513 WFIKKN1Q96NZ8 548 aa11.83□□□□□ -0.52
SIX4-201ENST00000216513 EXOGQ9Y2C4 368 aaKnown RBP11.83□□□□□ -0.52
SIX4-201ENST00000216513 FABP9Q0Z7S8 132 aa11.83□□□□□ -0.52
SIX4-201ENST00000216513 SLC25A42Q86VD7 318 aa11.83□□□□□ -0.52
SIX4-201ENST00000216513 CXorf58Q96LI9 332 aa11.83□□□□□ -0.52
SIX4-201ENST00000216513 CHST5Q9GZS9 411 aa11.83□□□□□ -0.52
SIX4-201ENST00000216513 MMP7P09237 267 aaPredicted RBP11.83□□□□□ -0.52
SIX4-201ENST00000216513 PRB4P10163 310 aaPredicted RBP11.83□□□□□ -0.52
SIX4-201ENST00000216513 C2orf50Q96LR7 162 aa11.83□□□□□ -0.52
SIX4-201ENST00000216513 GOLT1BQ9Y3E0 138 aa11.83□□□□□ -0.52
SIX4-201ENST00000216513 TRAV8-7A0A075B6U6 113 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 RAB29O14966 203 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 CHST1O43916 411 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 DUS4LO95620 317 aaKnown RBP11.82□□□□□ -0.52
SIX4-201ENST00000216513 OR2H2O95918 312 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 LHX2P50458 406 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 KRTDAPP60985 99 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 FFAR4Q5NUL3 377 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 OR1L4Q8NGR5 311 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 SNX22Q96L94 193 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 TRIM77I1YAP6 450 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 JTBO76095 146 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 SFTA3P0C7M3 94 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 PMCHP20382 165 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 ID1P41134 155 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 ZNF680Q8NEM1 530 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 WNT5BQ9H1J7 359 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 MTCL1Q9Y4B5 1905 aaKnown RBP11.82□□□□□ -0.52
SIX4-201ENST00000216513 CELA3BP08861 270 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 BTG1P62324 171 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 POLR2GP62487 172 aaKnown RBP eCLIP11.82□□□□□ -0.52
SIX4-201ENST00000216513 FAM166AQ6J272 317 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 ETV3LQ6ZN32 361 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 CLEC7AQ9BXN2 247 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 LOC102723996A0A087X1L8 192 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 IGF2P01344 180 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 CLDN18P56856 261 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 MPV17LQ2QL34 196 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 TIGITQ495A1 244 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 OR8I2Q8N0Y5 310 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 ADAT3Q96EY9 351 aaPredicted RBP11.82□□□□□ -0.52
SIX4-201ENST00000216513 ARID1AO14497 2285 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 HLA-DRB3P79483 266 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 NFAM1Q8NET5 270 aaPredicted RBP11.82□□□□□ -0.52
SIX4-201ENST00000216513 SH2D2AQ9NP31 389 aa11.82□□□□□ -0.52
SIX4-201ENST00000216513 XKRY2A2RUG3 117 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 G3V3Q6 166 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 NQO2P16083 231 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 CXCL3P19876 107 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 WDFY1Q8IWB7 410 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 CTHRC1Q96CG8 243 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 STARD4Q96DR4 205 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 MMP24Q9Y5R2 645 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 PTPRFP10586 1907 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 CPN1P15169 458 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 MYPOPQ86VE0 399 aaPredicted RBP11.81□□□□□ -0.52
SIX4-201ENST00000216513 OR5C1Q8NGR4 320 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 ELF5Q9UKW6 265 aaPredicted RBP11.81□□□□□ -0.52
SIX4-201ENST00000216513 DOCK6Q96HP0 2047 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 CDRT15L2A8MXV6 281 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 E5RGE8 158 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 COX5AP20674 150 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 TCL1AP56279 114 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 ERVFC1-1P60608 527 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 CD300LDQ6UXZ3 194 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 MEGF10Q96KG7 1140 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 A0A0G2JNJ9 132 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 G6PCP35575 357 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 CA7P43166 264 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 AANATQ16613 207 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 RPEL1Q2QD12 228 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 BVESQ8NE79 360 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 Q9UFV3 132 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 LCTP09848 1927 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 A0A1W2PP11 408 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 TPPP2P59282 170 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 OR51I2Q9H344 312 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 IDI2-AS1Q9NZ38 188 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 KCNE5Q9UJ90 142 aa11.81□□□□□ -0.52
SIX4-201ENST00000216513 IGLV3-12A0A075B6K2 115 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 DHRS2Q13268 280 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 RRN3P1Q2M238 152 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 C12orf54Q6X4T0 127 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 SLC25A5P05141 298 aaKnown RBP11.8□□□□□ -0.52
SIX4-201ENST00000216513 USF1P22415 310 aaPredicted RBP11.8□□□□□ -0.52
SIX4-201ENST00000216513 ZNF273Q14593 569 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 MAPK1IP1LQ8NDC0 245 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 SMIM4Q8WVI0 70 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 SSMEM1Q8WWF3 244 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 ABHD14BQ96IU4 210 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 GSX2Q9BZM3 304 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms